Literature DB >> 33211478

Machine Learning for Electronically Excited States of Molecules.

Julia Westermayr1, Philipp Marquetand1,2,3.   

Abstract

Electronically excited states of molecules are at the heart of photochemistry, photophysics, as well as photobiology and also play a role in material science. Their theoretical description requires highly accurate quantum chemical calculations, which are computationally expensive. In this review, we focus on not only how machine learning is employed to speed up such excited-state simulations but also how this branch of artificial intelligence can be used to advance this exciting research field in all its aspects. Discussed applications of machine learning for excited states include excited-state dynamics simulations, static calculations of absorption spectra, as well as many others. In order to put these studies into context, we discuss the promises and pitfalls of the involved machine learning techniques. Since the latter are mostly based on quantum chemistry calculations, we also provide a short introduction into excited-state electronic structure methods and approaches for nonadiabatic dynamics simulations and describe tricks and problems when using them in machine learning for excited states of molecules.

Entities:  

Year:  2020        PMID: 33211478      PMCID: PMC8391943          DOI: 10.1021/acs.chemrev.0c00749

Source DB:  PubMed          Journal:  Chem Rev        ISSN: 0009-2665            Impact factor:   60.622


  408 in total

1.  GROMACS: fast, flexible, and free.

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2.  Generalized trajectory surface hopping method based on the Zhu-Nakamura theory.

Authors:  Ponmile Oloyede; Gennady Mil'nikov; Hiroki Nakamura
Journal:  J Chem Phys       Date:  2006-04-14       Impact factor: 3.488

3.  Representing molecule-surface interactions with symmetry-adapted neural networks.

Authors:  Jörg Behler; Sönke Lorenz; Karsten Reuter
Journal:  J Chem Phys       Date:  2007-07-07       Impact factor: 3.488

4.  Dynamics in reactions on metal surfaces: A theoretical perspective.

Authors:  Bin Jiang; Hua Guo
Journal:  J Chem Phys       Date:  2019-05-14       Impact factor: 3.488

5.  Enumeration of 166 billion organic small molecules in the chemical universe database GDB-17.

Authors:  Lars Ruddigkeit; Ruud van Deursen; Lorenz C Blum; Jean-Louis Reymond
Journal:  J Chem Inf Model       Date:  2012-11-01       Impact factor: 4.956

6.  Minimum Mode Saddle Point Searches Using Gaussian Process Regression with Inverse-Distance Covariance Function.

Authors:  Olli-Pekka Koistinen; Vilhjálmur Ásgeirsson; Aki Vehtari; Hannes Jónsson
Journal:  J Chem Theory Comput       Date:  2019-12-19       Impact factor: 6.006

7.  Automatically growing global reactive neural network potential energy surfaces: A trajectory-free active learning strategy.

Authors:  Qidong Lin; Yaolong Zhang; Bin Zhao; Bin Jiang
Journal:  J Chem Phys       Date:  2020-04-21       Impact factor: 3.488

8.  Atomic Energies from a Convolutional Neural Network.

Authors:  Xin Chen; Mathias S Jørgensen; Jun Li; Bjørk Hammer
Journal:  J Chem Theory Comput       Date:  2018-06-13       Impact factor: 6.006

9.  Efficient Construction of Excited-State Hessian Matrices with Machine Learning Accelerated Multilayer Energy-Based Fragment Method.

Authors:  Wen-Kai Chen; Yaolong Zhang; Bin Jiang; Wei-Hai Fang; Ganglong Cui
Journal:  J Phys Chem A       Date:  2020-06-26       Impact factor: 2.781

10.  Simulated and Experimental Time-Resolved Photoelectron Spectra of the Intersystem Crossing Dynamics in 2-Thiouracil.

Authors:  Sebastian Mai; Abed Mohamadzade; Philipp Marquetand; Leticia González; Susanne Ullrich
Journal:  Molecules       Date:  2018-11-01       Impact factor: 4.411

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  20 in total

1.  Gaussian Process Regression for Materials and Molecules.

Authors:  Volker L Deringer; Albert P Bartók; Noam Bernstein; David M Wilkins; Michele Ceriotti; Gábor Csányi
Journal:  Chem Rev       Date:  2021-08-16       Impact factor: 60.622

Review 2.  Dye-sensitized solar cells strike back.

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Journal:  Chem Soc Rev       Date:  2021-11-15       Impact factor: 54.564

Review 3.  Recent progress in atomistic modeling of light-harvesting complexes: a mini review.

Authors:  Sayan Maity; Ulrich Kleinekathöfer
Journal:  Photosynth Res       Date:  2022-10-07       Impact factor: 3.429

4.  Deep learning study of tyrosine reveals that roaming can lead to photodamage.

Authors:  Julia Westermayr; Michael Gastegger; Dóra Vörös; Lisa Panzenboeck; Florian Joerg; Leticia González; Philipp Marquetand
Journal:  Nat Chem       Date:  2022-06-02       Impact factor: 24.274

5.  Identifying structure-absorption relationships and predicting absorption strength of non-fullerene acceptors for organic photovoltaics.

Authors:  Jun Yan; Xabier Rodríguez-Martínez; Drew Pearce; Hana Douglas; Danai Bili; Mohammed Azzouzi; Flurin Eisner; Alise Virbule; Elham Rezasoltani; Valentina Belova; Bernhard Dörling; Sheridan Few; Anna A Szumska; Xueyan Hou; Guichuan Zhang; Hin-Lap Yip; Mariano Campoy-Quiles; Jenny Nelson
Journal:  Energy Environ Sci       Date:  2022-05-20       Impact factor: 39.714

6.  Excited state non-adiabatic dynamics of large photoswitchable molecules using a chemically transferable machine learning potential.

Authors:  Simon Axelrod; Eugene Shakhnovich; Rafael Gómez-Bombarelli
Journal:  Nat Commun       Date:  2022-06-15       Impact factor: 17.694

Review 7.  Ab Initio Machine Learning in Chemical Compound Space.

Authors:  Bing Huang; O Anatole von Lilienfeld
Journal:  Chem Rev       Date:  2021-08-13       Impact factor: 60.622

8.  Machine Learning Force Fields.

Authors:  Oliver T Unke; Stefan Chmiela; Huziel E Sauceda; Michael Gastegger; Igor Poltavsky; Kristof T Schütt; Alexandre Tkatchenko; Klaus-Robert Müller
Journal:  Chem Rev       Date:  2021-03-11       Impact factor: 60.622

9.  Theoretical studies on triplet-state driven dissociation of formaldehyde by quasi-classical molecular dynamics simulation on machine-learning potential energy surface.

Authors:  Shichen Lin; Daoling Peng; Weitao Yang; Feng Long Gu; Zhenggang Lan
Journal:  J Chem Phys       Date:  2021-12-07       Impact factor: 3.488

10.  BuRNN: Buffer Region Neural Network Approach for Polarizable-Embedding Neural Network/Molecular Mechanics Simulations.

Authors:  Bettina Lier; Peter Poliak; Philipp Marquetand; Julia Westermayr; Chris Oostenbrink
Journal:  J Phys Chem Lett       Date:  2022-04-25       Impact factor: 6.888

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