Literature DB >> 33165998

Nanodiscs: A toolkit for membrane protein science.

Stephen G Sligar1, Ilia G Denisov1.   

Abstract

Membrane proteins are involved in numerous vital biological processes, including transport, signal transduction and the enzymes in a variety of metabolic pathways. Integral membrane proteins account for up to 30% of the human proteome and they make up more than half of all currently marketed therapeutic targets. Unfortunately, membrane proteins are inherently recalcitrant to study using the normal toolkit available to scientists, and one is most often left with the challenge of finding inhibitors, activators and specific antibodies using a denatured or detergent solubilized aggregate. The Nanodisc platform circumvents these challenges by providing a self-assembled system that renders typically insoluble, yet biologically and pharmacologically significant, targets such as receptors, transporters, enzymes, and viral antigens soluble in aqueous media in a native-like bilayer environment that maintain a target's functional activity. By providing a bilayer surface of defined composition and structure, Nanodiscs have found great utility in the study of cellular signaling complexes that assemble on a membrane surface. Nanodiscs provide a nanometer scale vehicle for the in vivo delivery of amphipathic drugs, therapeutic lipids, tethered nucleic acids, imaging agents and active protein complexes. This means for generating nanoscale lipid bilayers has spawned the successful use of numerous other polymer and peptide amphipathic systems. This review, in celebration of the Anfinsen Award, summarizes some recent results and provides an inroad into the current and historical literature.
© 2020 The Protein Society.

Entities:  

Keywords:  Nanodisc; lipid bilayer; membrane protein; signaling complex

Mesh:

Substances:

Year:  2020        PMID: 33165998      PMCID: PMC7784751          DOI: 10.1002/pro.3994

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.993


  200 in total

1.  Conformational analysis of human ATP-binding cassette transporter ABCB1 in lipid nanodiscs and inhibition by the antibodies MRK16 and UIC2.

Authors:  Tasha K Ritchie; Hyewon Kwon; William M Atkins
Journal:  J Biol Chem       Date:  2011-09-21       Impact factor: 5.157

2.  Christian B. Anfinsen (1916-95).

Authors:  F M Richards
Journal:  Nature       Date:  1995-07-06       Impact factor: 49.962

3.  Cyclooxygenase-2 catalysis and inhibition in lipid bilayer nanodiscs.

Authors:  Benjamin J Orlando; Daniel R McDougle; Michael J Lucido; Edward T Eng; Leigh Ann Graham; Claus Schneider; David L Stokes; Aditi Das; Michael G Malkowski
Journal:  Arch Biochem Biophys       Date:  2014-02-03       Impact factor: 4.013

4.  Structure of apolipoprotein A-I in three homogeneous, reconstituted high density lipoprotein particles.

Authors:  J H Wald; E S Krul; A Jonas
Journal:  J Biol Chem       Date:  1990-11-15       Impact factor: 5.157

5.  The critical iron-oxygen intermediate in human aromatase.

Authors:  Stephanie L Gantt; Ilia G Denisov; Yelena V Grinkova; Stephen G Sligar
Journal:  Biochem Biophys Res Commun       Date:  2009-07-08       Impact factor: 3.575

6.  Oxidation-reduction properties of rat liver cytochromes P-450 and NADPH-cytochrome p-450 reductase related to catalysis in reconstituted systems.

Authors:  F P Guengerich
Journal:  Biochemistry       Date:  1983-06-07       Impact factor: 3.162

7.  Cell labeling via membrane-anchored lipophilic MR contrast agents.

Authors:  Christiane E Carney; Keith W MacRenaris; Daniel J Mastarone; David R Kasjanski; Andy H Hung; Thomas J Meade
Journal:  Bioconjug Chem       Date:  2014-05-09       Impact factor: 4.774

8.  Liver microsomal lipid enhances the activity and redox coupling of colocalized cytochrome P450 reductase-cytochrome P450 3A4 in nanodiscs.

Authors:  Kang-Cheng Liu; John M X Hughes; Sam Hay; Nigel S Scrutton
Journal:  FEBS J       Date:  2017-06-30       Impact factor: 5.542

9.  Structures reveal gatekeeping of the mitochondrial Ca2+ uniporter by MICU1-MICU2.

Authors:  Chongyuan Wang; Agata Jacewicz; Bryce D Delgado; Rozbeh Baradaran; Stephen Barstow Long
Journal:  Elife       Date:  2020-07-15       Impact factor: 8.140

10.  Phosphatidylethanolamine-phosphatidylserine binding synergy of seven coagulation factors revealed using Nanodisc arrays on silicon photonic sensors.

Authors:  Sara M Medfisch; Ellen M Muehl; James H Morrissey; Ryan C Bailey
Journal:  Sci Rep       Date:  2020-10-15       Impact factor: 4.379

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  16 in total

1.  Cryo-EM structures of Escherichia coli cytochrome bo 3 reveal bound phospholipids and ubiquinone-8 in a dynamic substrate binding site.

Authors:  Jiao Li; Long Han; Francesca Vallese; Ziqiao Ding; Sylvia K Choi; Sangjin Hong; Yanmei Luo; Bin Liu; Chun Kit Chan; Emad Tajkhorshid; Jiapeng Zhu; Oliver Clarke; Kai Zhang; Robert Gennis
Journal:  Proc Natl Acad Sci U S A       Date:  2021-08-24       Impact factor: 11.205

Review 2.  Membranes under the Magnetic Lens: A Dive into the Diverse World of Membrane Protein Structures Using Cryo-EM.

Authors:  Sarah J Piper; Rachel M Johnson; Denise Wootten; Patrick M Sexton
Journal:  Chem Rev       Date:  2022-07-18       Impact factor: 72.087

3.  MT1 Melatonin Receptor Reconstitution in Nanodiscs.

Authors:  Jean A Boutin; Christel Logez; Marjorie Damian; Renaud Wagner; Jean-Louis Banères; Gilles Ferry
Journal:  Methods Mol Biol       Date:  2022

4.  Detergent-free isolation of CYP450-reductase's FMN-binding domain in E. coli lipid-nanodiscs using a charge-free polymer.

Authors:  Bankala Krishnarjuna; Thirupathi Ravula; Ayyalusamy Ramamoorthy
Journal:  Chem Commun (Camb)       Date:  2022-04-14       Impact factor: 6.065

5.  Measurement of Residual Dipolar Couplings Using Magnetically Aligned and Flipped Nanodiscs.

Authors:  Thirupathi Ravula; Ayyalusamy Ramamoorthy
Journal:  Langmuir       Date:  2021-12-29       Impact factor: 4.331

6.  Nanodisc reconstitution of flavin mononucleotide binding domain of cytochrome-P450-reductase enables high-resolution NMR probing.

Authors:  Bankala Krishnarjuna; Toshio Yamazaki; G M Anantharamaiah; Ayyalusamy Ramamoorthy
Journal:  Chem Commun (Camb)       Date:  2021-04-16       Impact factor: 6.222

7.  Correlating ion channel structure and function.

Authors:  Philipp A M Schmidpeter; Crina M Nimigean
Journal:  Methods Enzymol       Date:  2021-03-25       Impact factor: 1.682

Review 8.  Nanodiscs: A toolkit for membrane protein science.

Authors:  Stephen G Sligar; Ilia G Denisov
Journal:  Protein Sci       Date:  2020-11-16       Impact factor: 6.993

Review 9.  Fake It 'Till You Make It-The Pursuit of Suitable Membrane Mimetics for Membrane Protein Biophysics.

Authors:  Johannes Thoma; Björn M Burmann
Journal:  Int J Mol Sci       Date:  2020-12-23       Impact factor: 5.923

10.  Developing Nanodisc-ID for label-free characterizations of membrane proteins.

Authors:  Huan Bao
Journal:  Commun Biol       Date:  2021-04-30
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