Literature DB >> 33374526

Fake It 'Till You Make It-The Pursuit of Suitable Membrane Mimetics for Membrane Protein Biophysics.

Johannes Thoma1,2, Björn M Burmann1,2.   

Abstract

Membrane proteins evolved to reside in the hydrophobic lipid bilayers of cellular membranes. Therefore, membrane proteins bridge the different aqueous compartments separated by the membrane, and furthermore, dynamically interact with their surrounding lipid environment. The latter not only stabilizes membrane proteins, but directly impacts their folding, structure and function. In order to be characterized with biophysical and structural biological methods, membrane proteins are typically extracted and subsequently purified from their native lipid environment. This approach requires that lipid membranes are replaced by suitable surrogates, which ideally closely mimic the native bilayer, in order to maintain the membrane proteins structural and functional integrity. In this review, we survey the currently available membrane mimetic environments ranging from detergent micelles to bicelles, nanodiscs, lipidic-cubic phase (LCP), liposomes, and polymersomes. We discuss their respective advantages and disadvantages as well as their suitability for downstream biophysical and structural characterization. Finally, we take a look at ongoing methodological developments, which aim for direct in-situ characterization of membrane proteins within native membranes instead of relying on membrane mimetics.

Entities:  

Keywords:  lipid bilayer; membrane mimetic; membrane protein

Mesh:

Substances:

Year:  2020        PMID: 33374526      PMCID: PMC7793082          DOI: 10.3390/ijms22010050

Source DB:  PubMed          Journal:  Int J Mol Sci        ISSN: 1422-0067            Impact factor:   5.923


  228 in total

Review 1.  Detergents as tools in membrane biochemistry.

Authors:  R M Garavito; S Ferguson-Miller
Journal:  J Biol Chem       Date:  2001-06-29       Impact factor: 5.157

Review 2.  Biomimetic nanoscale reactors and networks.

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Journal:  Annu Rev Phys Chem       Date:  2004       Impact factor: 12.703

3.  Single-molecule force spectroscopy from nanodiscs: an assay to quantify folding, stability, and interactions of native membrane proteins.

Authors:  Michael Zocher; Christian Roos; Susanne Wegmann; Patrick D Bosshart; Volker Dötsch; Frank Bernhard; Daniel J Müller
Journal:  ACS Nano       Date:  2011-12-30       Impact factor: 15.881

4.  Can nanotechnology potentiate photodynamic therapy?

Authors:  Ying-Ying Huang; Sulbha K Sharma; Tianhong Dai; Hoon Chung; Anastasia Yaroslavsky; Maria Garcia-Diaz; Julie Chang; Long Y Chiang; Michael R Hamblin
Journal:  Nanotechnol Rev       Date:  2012-03       Impact factor: 7.848

5.  The use of detergents to purify membrane proteins.

Authors:  Thomas Arnold; Dirk Linke
Journal:  Curr Protoc Protein Sci       Date:  2008-08

Review 6.  Crystallization of membrane proteins.

Authors:  C Ostermeier; H Michel
Journal:  Curr Opin Struct Biol       Date:  1997-10       Impact factor: 6.809

Review 7.  Nonmicellar systems for solution NMR spectroscopy of membrane proteins.

Authors:  Thomas Raschle; Sebastian Hiller; Manuel Etzkorn; Gerhard Wagner
Journal:  Curr Opin Struct Biol       Date:  2010-08       Impact factor: 6.809

8.  The supramolecular architecture of junctional microdomains in native lens membranes.

Authors:  Nikolay Buzhynskyy; Richard K Hite; Thomas Walz; Simon Scheuring
Journal:  EMBO Rep       Date:  2006-11-24       Impact factor: 8.807

9.  Stopped-Flow Fluorometric Ion Flux Assay for Ligand-Gated Ion Channel Studies.

Authors:  David J Posson; Radda Rusinova; Olaf S Andersen; Crina M Nimigean
Journal:  Methods Mol Biol       Date:  2018

10.  Lipid Internal Dynamics Probed in Nanodiscs.

Authors:  Denis Martinez; Marion Decossas; Julia Kowal; Lukas Frey; Henning Stahlberg; Erick J Dufourc; Roland Riek; Birgit Habenstein; Stefan Bibow; Antoine Loquet
Journal:  Chemphyschem       Date:  2017-06-30       Impact factor: 3.102

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  2 in total

1.  Structure, Assembly, and Function of Tripartite Efflux and Type 1 Secretion Systems in Gram-Negative Bacteria.

Authors:  Ilyas Alav; Jessica Kobylka; Miriam S Kuth; Klaas M Pos; Martin Picard; Jessica M A Blair; Vassiliy N Bavro
Journal:  Chem Rev       Date:  2021-04-28       Impact factor: 60.622

Review 2.  Assessing the Role of Lipids in the Molecular Mechanism of Membrane Proteins.

Authors:  Léni Jodaitis; Thomas van Oene; Chloé Martens
Journal:  Int J Mol Sci       Date:  2021-07-06       Impact factor: 5.923

  2 in total

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