Literature DB >> 33139244

Tumor Mutational Burden as a Predictive Biomarker in Solid Tumors.

Dan Sha1, Zhaohui Jin2, Jan Budczies3,4, Klaus Kluck3,4, Albrecht Stenzinger3,4, Frank A Sinicrope5,2,6.   

Abstract

Tumor mutational burden (TMB), defined as the number of somatic mutations per megabase of interrogated genomic sequence, varies across malignancies. Panel sequencing-based estimates of TMB have largely replaced whole-exome sequencing-derived TMB in the clinic. Retrospective evidence suggests that TMB can predict the efficacy of immune checkpoint inhibitors, and data from KEYNOTE-158 led to the recent FDA approval of pembrolizumab for the TMB-high tumor subgroup. Unmet needs include prospective validation of TMB cutoffs in relationship to tumor type and patient outcomes. Furthermore, standardization and harmonization of TMB measurement across test platforms are important to the successful implementation of TMB in clinical practice. SIGNIFICANCE: Evaluation of TMB as a predictive biomarker creates the need to harmonize panel-based TMB estimation and standardize its reporting. TMB can improve the predictive accuracy for immunotherapy outcomes, and has the potential to expand the candidate pool of patients for treatment with immune checkpoint inhibitors. ©2020 American Association for Cancer Research.

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Year:  2020        PMID: 33139244      PMCID: PMC7710563          DOI: 10.1158/2159-8290.CD-20-0522

Source DB:  PubMed          Journal:  Cancer Discov        ISSN: 2159-8274            Impact factor:   38.272


  123 in total

Review 1.  Cancer Neoantigens and Applications for Immunotherapy.

Authors:  Alexis Desrichard; Alexandra Snyder; Timothy A Chan
Journal:  Clin Cancer Res       Date:  2015-10-29       Impact factor: 12.531

2.  Genetic basis for clinical response to CTLA-4 blockade in melanoma.

Authors:  Alexandra Snyder; Vladimir Makarov; Taha Merghoub; Jianda Yuan; Jedd D Wolchok; Timothy A Chan; Jesse M Zaretsky; Alexis Desrichard; Logan A Walsh; Michael A Postow; Phillip Wong; Teresa S Ho; Travis J Hollmann; Cameron Bruggeman; Kasthuri Kannan; Yanyun Li; Ceyhan Elipenahli; Cailian Liu; Christopher T Harbison; Lisu Wang; Antoni Ribas
Journal:  N Engl J Med       Date:  2014-11-19       Impact factor: 91.245

3.  Integrated analysis of the immunological and genetic status in and across cancer types: impact of mutational signatures beyond tumor mutational burden.

Authors:  Jan Budczies; Anja Seidel; Petros Christopoulos; Volker Endris; Matthias Kloor; Balázs Győrffy; Barbara Seliger; Peter Schirmacher; Albrecht Stenzinger; Carsten Denkert
Journal:  Oncoimmunology       Date:  2018-10-19       Impact factor: 8.110

4.  Mutational Analysis of Patients With Colorectal Cancer in CALGB/SWOG 80405 Identifies New Roles of Microsatellite Instability and Tumor Mutational Burden for Patient Outcome.

Authors:  Federico Innocenti; Fang-Shu Ou; Xueping Qu; Tyler J Zemla; Donna Niedzwiecki; Rachel Tam; Shilpi Mahajan; Richard M Goldberg; Monica M Bertagnolli; Charles D Blanke; Hanna Sanoff; James Atkins; Blasé Polite; Alan P Venook; Heinz-Josef Lenz; Omar Kabbarah
Journal:  J Clin Oncol       Date:  2019-03-13       Impact factor: 44.544

5.  Genomic landscape of non-small cell lung cancer in smokers and never-smokers.

Authors:  Ramaswamy Govindan; Li Ding; Malachi Griffith; Janakiraman Subramanian; Nathan D Dees; Krishna L Kanchi; Christopher A Maher; Robert Fulton; Lucinda Fulton; John Wallis; Ken Chen; Jason Walker; Sandra McDonald; Ron Bose; David Ornitz; Donghai Xiong; Ming You; David J Dooling; Mark Watson; Elaine R Mardis; Richard K Wilson
Journal:  Cell       Date:  2012-09-14       Impact factor: 41.582

6.  Nivolumab versus Everolimus in Advanced Renal-Cell Carcinoma.

Authors:  Robert J Motzer; Bernard Escudier; David F McDermott; Saby George; Hans J Hammers; Sandhya Srinivas; Scott S Tykodi; Jeffrey A Sosman; Giuseppe Procopio; Elizabeth R Plimack; Daniel Castellano; Toni K Choueiri; Howard Gurney; Frede Donskov; Petri Bono; John Wagstaff; Thomas C Gauler; Takeshi Ueda; Yoshihiko Tomita; Fabio A Schutz; Christian Kollmannsberger; James Larkin; Alain Ravaud; Jason S Simon; Li-An Xu; Ian M Waxman; Padmanee Sharma
Journal:  N Engl J Med       Date:  2015-09-25       Impact factor: 91.245

7.  Development and validation of a clinical cancer genomic profiling test based on massively parallel DNA sequencing.

Authors:  Garrett M Frampton; Alex Fichtenholtz; Geoff A Otto; Kai Wang; Sean R Downing; Jie He; Michael Schnall-Levin; Jared White; Eric M Sanford; Peter An; James Sun; Frank Juhn; Kristina Brennan; Kiel Iwanik; Ashley Maillet; Jamie Buell; Emily White; Mandy Zhao; Sohail Balasubramanian; Selmira Terzic; Tina Richards; Vera Banning; Lazaro Garcia; Kristen Mahoney; Zac Zwirko; Amy Donahue; Himisha Beltran; Juan Miguel Mosquera; Mark A Rubin; Snjezana Dogan; Cyrus V Hedvat; Michael F Berger; Lajos Pusztai; Matthias Lechner; Chris Boshoff; Mirna Jarosz; Christine Vietz; Alex Parker; Vincent A Miller; Jeffrey S Ross; John Curran; Maureen T Cronin; Philip J Stephens; Doron Lipson; Roman Yelensky
Journal:  Nat Biotechnol       Date:  2013-10-20       Impact factor: 54.908

8.  Nivolumab in Patients with Advanced Platinum-resistant Urothelial Carcinoma: Efficacy, Safety, and Biomarker Analyses with Extended Follow-up from CheckMate 275.

Authors:  Abdel Saci; Matthew D Galsky; Peter M Szabo; G Celine Han; Gary Grossfeld; Sandra Collette; Arlene Siefker-Radtke; Andrea Necchi; Padmanee Sharma
Journal:  Clin Cancer Res       Date:  2020-06-12       Impact factor: 12.531

9.  Bioinformatic Methods and Bridging of Assay Results for Reliable Tumor Mutational Burden Assessment in Non-Small-Cell Lung Cancer.

Authors:  Han Chang; Ariella Sasson; Sujaya Srinivasan; Ryan Golhar; Danielle M Greenawalt; William J Geese; George Green; Kim Zerba; Stefan Kirov; Joseph Szustakowski
Journal:  Mol Diagn Ther       Date:  2019-08       Impact factor: 4.074

Review 10.  The biology and treatment of Merkel cell carcinoma: current understanding and research priorities.

Authors:  Paul W Harms; Kelly L Harms; Patrick S Moore; James A DeCaprio; Paul Nghiem; Michael K K Wong; Isaac Brownell
Journal:  Nat Rev Clin Oncol       Date:  2018-12       Impact factor: 66.675

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  104 in total

1.  High tumor mutation burden fails to predict immune checkpoint blockade response across all cancer types.

Authors:  D J McGrail; P G Pilié; N U Rashid; L Voorwerk; M Slagter; M Kok; E Jonasch; M Khasraw; A B Heimberger; B Lim; N T Ueno; J K Litton; R Ferrarotto; J T Chang; S L Moulder; S-Y Lin
Journal:  Ann Oncol       Date:  2021-03-15       Impact factor: 32.976

2.  Melanoma: An immunotherapy journey from bench to bedside.

Authors:  Vishal Navani; Moira C Graves; Hiren Mandaliya; Martin Hong; Andre van der Westhuizen; Jennifer Martin; Nikola A Bowden
Journal:  Cancer Treat Res       Date:  2022

3.  An Immune-Related lncRNA Signature to Predict the Biochemical Recurrence and Immune Landscape in Prostate Cancer.

Authors:  Guian Zhang; Yong Luo
Journal:  Int J Gen Med       Date:  2021-11-30

4.  Importance of Early Next-Generation Sequencing in Microsatellite Unstable Colon Cancer With a High Tumor Mutation Burden.

Authors:  Sethi Ashish; Moses Raj
Journal:  Cureus       Date:  2022-03-06

5.  Prediction of prognosis and immunotherapy response with a robust immune-related lncRNA pair signature in lung adenocarcinoma.

Authors:  Kui Cao; Mingdong Liu; Keru Ma; Xiangyu Jiang; Jianqun Ma; Jinhong Zhu
Journal:  Cancer Immunol Immunother       Date:  2021-10-15       Impact factor: 6.968

6.  Integrative tumour mutation burden with CD39 and PD-L1 for the prediction of response to PD-L1 blockade and adjuvant chemotherapy in muscle-invasive bladder cancer patients.

Authors:  Chunnan Liu; Zhaopei Liu; Kaifeng Jin; Han Zeng; Fei Shao; Yuan Chang; Yiwei Wang; Le Xu; Zewei Wang; Yu Zhu; Weijuan Zhang
Journal:  Br J Cancer       Date:  2022-08-23       Impact factor: 9.075

7.  Characteristics of Pan-Cancer Patients With Ultrahigh Tumor Mutation Burden.

Authors:  Hong Yuan; Jun Ji; Min Shi; Yan Shi; Jing Liu; Junwei Wu; Chen Yang; Wenqi Xi; Qingyuan Li; Wei Zhu; Jingjie Li; Xiaoli Gong; Jun Zhang
Journal:  Front Oncol       Date:  2021-04-22       Impact factor: 6.244

8.  Cross-oncopanel study reveals high sensitivity and accuracy with overall analytical performance depending on genomic regions.

Authors:  Binsheng Gong; Dan Li; Rebecca Kusko; Natalia Novoradovskaya; Yifan Zhang; Shangzi Wang; Carlos Pabón-Peña; Zhihong Zhang; Kevin Lai; Wanshi Cai; Jennifer S LoCoco; Eric Lader; Todd A Richmond; Vinay K Mittal; Liang-Chun Liu; Donald J Johann; James C Willey; Pierre R Bushel; Ying Yu; Chang Xu; Guangchun Chen; Daniel Burgess; Simon Cawley; Kristina Giorda; Nathan Haseley; Fujun Qiu; Katherine Wilkins; Hanane Arib; Claire Attwooll; Kevin Babson; Longlong Bao; Wenjun Bao; Anne Bergstrom Lucas; Hunter Best; Ambica Bhandari; Halil Bisgin; James Blackburn; Thomas M Blomquist; Lisa Boardman; Blake Burgher; Daniel J Butler; Chia-Jung Chang; Alka Chaubey; Tao Chen; Marco Chierici; Christopher R Chin; Devin Close; Jeffrey Conroy; Jessica Cooley Coleman; Daniel J Craig; Erin Crawford; Angela Del Pozo; Ira W Deveson; Daniel Duncan; Agda Karina Eterovic; Xiaohui Fan; Jonathan Foox; Cesare Furlanello; Abhisek Ghosal; Sean Glenn; Meijian Guan; Christine Haag; Xinyi Hang; Scott Happe; Brittany Hennigan; Jennifer Hipp; Huixiao Hong; Kyle Horvath; Jianhong Hu; Li-Yuan Hung; Mirna Jarosz; Jennifer Kerkhof; Benjamin Kipp; David Philip Kreil; Paweł Łabaj; Pablo Lapunzina; Peng Li; Quan-Zhen Li; Weihua Li; Zhiguang Li; Yu Liang; Shaoqing Liu; Zhichao Liu; Charles Ma; Narasimha Marella; Rubén Martín-Arenas; Dalila B Megherbi; Qingchang Meng; Piotr A Mieczkowski; Tom Morrison; Donna Muzny; Baitang Ning; Barbara L Parsons; Cloud P Paweletz; Mehdi Pirooznia; Wubin Qu; Amelia Raymond; Paul Rindler; Rebecca Ringler; Bekim Sadikovic; Andreas Scherer; Egbert Schulze; Robert Sebra; Rita Shaknovich; Qiang Shi; Tieliu Shi; Juan Carlos Silla-Castro; Melissa Smith; Mario Solís López; Ping Song; Daniel Stetson; Maya Strahl; Alan Stuart; Julianna Supplee; Philippe Szankasi; Haowen Tan; Lin-Ya Tang; Yonghui Tao; Shraddha Thakkar; Danielle Thierry-Mieg; Jean Thierry-Mieg; Venkat J Thodima; David Thomas; Boris Tichý; Nikola Tom; Elena Vallespin Garcia; Suman Verma; Kimbley Walker; Charles Wang; Junwen Wang; Yexun Wang; Zhining Wen; Valtteri Wirta; Leihong Wu; Chunlin Xiao; Wenzhong Xiao; Shibei Xu; Mary Yang; Jianming Ying; Shun H Yip; Guangliang Zhang; Sa Zhang; Meiru Zhao; Yuanting Zheng; Xiaoyan Zhou; Christopher E Mason; Timothy Mercer; Weida Tong; Leming Shi; Wendell Jones; Joshua Xu
Journal:  Genome Biol       Date:  2021-04-16       Impact factor: 13.583

9.  Intrapulmonic Cavity or Necrosis on Baseline CT Scan Serves as an Efficacy Predictor of Anti-PD-(L)1 Inhibitor in Advanced Lung Squamous Cell Carcinoma.

Authors:  Tao Lu; Longfeng Zhang; Mingqiu Chen; Xiaobin Zheng; Kan Jiang; Xinlong Zheng; Chao Li; Weijin Xiao; Qian Miao; Shanshan Yang; Gen Lin
Journal:  Cancer Manag Res       Date:  2021-07-30       Impact factor: 3.989

10.  A Signature-Based Classification of Gastric Cancer That Stratifies Tumor Immunity and Predicts Responses to PD-1 Inhibitors.

Authors:  Song Li; Jing Gao; Qian Xu; Xue Zhang; Miao Huang; Xin Dai; Kai Huang; Lian Liu
Journal:  Front Immunol       Date:  2021-06-11       Impact factor: 7.561

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