Literature DB >> 33132189

Insight into human Miro1/2 domain organization based on the structure of its N-terminal GTPase.

Kyle P Smith1, Pamela J Focia2, Srinivas Chakravarthy3, Eric C Landahl4, Julian L Klosowiak5, Sarah E Rice6, Douglas M Freymann7.   

Abstract

Dysfunction in mitochondrial dynamics is believed to contribute to a host of neurological disorders and has recently been implicated in cancer metastasis. The outer mitochondrial membrane adapter protein Miro functions in the regulation of mitochondrial mobility and degradation, however, the structural basis for its roles in mitochondrial regulation remain unknown. Here, we report a 1.7Å crystal structure of N-terminal GTPase domain (nGTPase) of human Miro1 bound unexpectedly to GTP, thereby revealing a non-catalytic configuration of the putative GTPase active site. We identify two conserved surfaces of the nGTPase, the "SELFYY" and "ITIP" motifs, that are potentially positioned to mediate dimerization or interaction with binding partners. Additionally, we report small angle X-ray scattering (SAXS) data obtained from the intact soluble HsMiro1 and its paralog HsMiro2. Taken together, the data allow modeling of a crescent-shaped assembly of the soluble domain of HsMiro1/2. PDB RSEFERENCE: Crystal structure of the human Miro1 N-terminal GTPase bound to GTP, 6D71.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Crystal structure; GTP-binding protein; Gem1p; Miro; Mitochondrial dynamics; RhoT

Year:  2020        PMID: 33132189      PMCID: PMC7744357          DOI: 10.1016/j.jsb.2020.107656

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  66 in total

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Authors:  Andrew W Malaby; Srinivas Chakravarthy; Thomas C Irving; Sagar V Kathuria; Osman Bilsel; David G Lambright
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2.  Mitochondrial Homeostasis: How Do Dimers of Mitofusins Mediate Mitochondrial Fusion?

Authors:  Oliver Daumke; Aurélien Roux
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Journal:  Biophys J       Date:  2012-10-02       Impact factor: 4.033

4.  Miro's N-terminal GTPase domain is required for transport of mitochondria into axons and dendrites.

Authors:  Milos Babic; Gary J Russo; Andrea J Wellington; Ryan M Sangston; Migdalia Gonzalez; Konrad E Zinsmaier
Journal:  J Neurosci       Date:  2015-04-08       Impact factor: 6.167

5.  Structure of the extremely slow GTPase Rab6A in the GTP bound form at 1.8A resolution.

Authors:  Tim Bergbrede; Olena Pylypenko; Alexey Rak; Kirill Alexandrov
Journal:  J Struct Biol       Date:  2005-11-18       Impact factor: 2.867

6.  Inhibition of RAS function through targeting an allosteric regulatory site.

Authors:  Russell Spencer-Smith; Akiko Koide; Yong Zhou; Raphael R Eguchi; Fern Sha; Priyanka Gajwani; Dianicha Santana; Ankit Gupta; Miranda Jacobs; Erika Herrero-Garcia; Jacqueline Cobbert; Hugo Lavoie; Matthew Smith; Thanashan Rajakulendran; Evan Dowdell; Mustafa Nazir Okur; Irina Dementieva; Frank Sicheri; Marc Therrien; John F Hancock; Mitsuhiko Ikura; Shohei Koide; John P O'Bryan
Journal:  Nat Chem Biol       Date:  2016-11-07       Impact factor: 15.040

Review 7.  Ca2+-dependent regulation of mitochondrial dynamics by the Miro-Milton complex.

Authors:  Xingguo Liu; György Hajnóczky
Journal:  Int J Biochem Cell Biol       Date:  2009-05-27       Impact factor: 5.085

Review 8.  Disturbed mitochondrial dynamics and neurodegenerative disorders.

Authors:  Florence Burté; Valerio Carelli; Patrick F Chinnery; Patrick Yu-Wai-Man
Journal:  Nat Rev Neurol       Date:  2014-12-09       Impact factor: 42.937

9.  Gem1 and ERMES do not directly affect phosphatidylserine transport from ER to mitochondria or mitochondrial inheritance.

Authors:  Tammy T Nguyen; Agnieszka Lewandowska; Jae-Yeon Choi; Daniel F Markgraf; Mirco Junker; Mesut Bilgin; Christer S Ejsing; Dennis R Voelker; Tom A Rapoport; Janet M Shaw
Journal:  Traffic       Date:  2012-04-08       Impact factor: 6.215

10.  Towards automated crystallographic structure refinement with phenix.refine.

Authors:  Pavel V Afonine; Ralf W Grosse-Kunstleve; Nathaniel Echols; Jeffrey J Headd; Nigel W Moriarty; Marat Mustyakimov; Thomas C Terwilliger; Alexandre Urzhumtsev; Peter H Zwart; Paul D Adams
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-03-16
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  4 in total

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Authors:  Madison Furnish; Dillon P Boulton; Victoria Genther; Denisa Grofova; Mitchell Lee Ellinwood; Lina Romero; M Scott Lucia; Scott D Cramer; M Cecilia Caino
Journal:  Mol Cancer Res       Date:  2022-04-01       Impact factor: 5.852

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Authors:  Pascal F Egea
Journal:  Front Cell Dev Biol       Date:  2021-11-29

Review 3.  Miro proteins and their role in mitochondrial transfer in cancer and beyond.

Authors:  Zuzana Nahacka; Jaromir Novak; Renata Zobalova; Jiri Neuzil
Journal:  Front Cell Dev Biol       Date:  2022-07-25

Review 4.  Mitochondrial trafficking and redox/phosphorylation signaling supporting cell migration phenotypes.

Authors:  Nathaniel Shannon; Randi Gravelle; Brian Cunniff
Journal:  Front Mol Biosci       Date:  2022-07-22
  4 in total

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