Jorge Escorihuela1, Wilhelmus J E Looijen2, Xiao Wang3, Adelia J A Aquino3,4,5, Hans Lischka3,6,7, Han Zuilhof2,3,8. 1. Departament de Quı́mica Orgànica, Universitat de València, Av. Vicent Andrés Estellés s/n, 46100 Burjassot, Valencia, Spain. 2. Laboratory of Organic Chemistry, Wageningen University, Stippeneng 4, 6708 WE Wageningen, The Netherlands. 3. School of Pharmaceutical Sciences and Technology, Tianjin University, Tianjin 300072, China. 4. Institute for Soil Research, University of Natural Resources and Life Sciences, Peter-Jordan-Strasse 82, A-1190 Vienna, Austria. 5. Department of Mechanical Engineering, Texas Tech University, Lubbock, Texas 79409, United States. 6. Institute for Theoretical Chemistry, University of Vienna, Waehringerstrasse 17, A-1090 Vienna, Austria. 7. Department of Chemistry and Biochemistry, Texas Tech University, Lubbock, Texas 79409-1061, United States. 8. Department of Chemical and Materials Engineering, Faculty of Engineering, King Abdulaziz University, 21589 Jeddah, Saudi Arabia.
Abstract
The chemistry of strained unsaturated cyclic compounds has experienced remarkable growth in recent years via the development of metal-free click reactions. Among these reactions, the cycloaddition of cyclopropenes and their analogues to ortho-quinones has been established as a highly promising click reaction. The present work investigates the mechanism involved in the cycloaddition of strained dienes to ortho-quinones and structural factors that would influence this reaction. For this purpose, we use B97D density functional theory calculations throughout, and for relevant cases, we use spin component-scaled MP2 calculations and single-point domain-based local pair natural orbital coupled cluster (DLPNO-CCSD(T)) calculations. The outcomes are analyzed in detail using the distortion/interaction model, and suggestions for future experimental work are made.
The chemistry of strained unsaturated cyclic compounds has experienced remarkable growth in recent years via the development of metal-free click reactions. Among these reactions, the cycloaddition of cyclopropenes and their analogues to ortho-quinones has been established as a highly promising click reaction. The present work investigates the mechanism involved in the cycloaddition of strained dienes to ortho-quinones and structural factors that would influence this reaction. For this purpose, we use B97D density functional theory calculations throughout, and for relevant cases, we use spin component-scaled MP2 calculations and single-point domain-based local pair natural orbital coupled cluster (DLPNO-CCSD(T)) calculations. The outcomes are analyzed in detail using the distortion/interaction model, and suggestions for future experimental work are made.
Since the coining of
click chemistry by Sharpless and co-workers
in 2001,[1] the quest for novel reactions
that fulfill the click requirements has experienced an exponential
blossoming growth. This emergence of click chemistry has had a profound
influence on almost all branches of chemical science, such as carbohydrate
chemistry,[2,3] polymer chemistry,[4,5] radiochemistry,[6,7] etc. From all of the reactions cataloged into the click chemistry
library, copper(I)-catalyzed 1,3-dipolar azide–alkyne cycloaddition
(CuAAC) emerged as the prototype click chemistry reaction as a consequence
of its robustness, quantitative yield, and high chemoselectivity.[8,9] This Cu-catalyzed reaction has been widely used as an efficient
functionalization strategy of polymeric materials and biomolecules
for in vitro applications;[10,11] however, the negative
effects of the Cu catalyst have greatly limited its use with living
systems.[12] This has driven the development
of metal-free, often strain-promoted reactions[13] and photochemical[14] click reactions.
Accordingly, light-activated thiol–ene and thiol reactions,[15,16] Diels–Alder and a manifold of 1,3-dipolar cycloadditions,
carbonyl condensations with oximes,[17] thiol-Michael
additions,[18] and sulfur(VI) fluoride exchange
(SuFEx)[19−22] reactions have been developed to overcome the use of metal catalysts.
Among these novel metal-free reactions, strain-promoted cycloadditions
have emerged as promising reactions due to their fast kinetics and
good to excellent yields. These reactions include the strain-promoted
azide–alkyne cycloaddition (SPAAC) reaction,[23−25] the inverse
electron-demand Diels–Alder (IEDDA)[26−29] reactions such as the tetrazine–trans-cyclooctene
(TCO)/cyclopropene click,[30] strain-promoted
alkyne–nitrone cycloaddition (SPANC),[31,32] and the strain-promoted oxidation-controlled cyclooctyne–1,2-quinone
cycloaddition (SPOCQ).[33−37]While all of these reactions have significant potential in
both
biological and materials sciences, the size (and sometimes hydrophobicity)
of the groups involved may hamper their effectiveness, especially
in crowded environments. Therefore, smaller and bio-orthogonal probes—often
termed mini-tags—are sought after. Among such small-sized targets,
cyclopropenes are picking up considerable attention. Cyclopropenes
have been shown to participate in fast bio-orthogonal ligation reactions
with 1,2,3,4-tetrazines and photoclickable tetrazoles.[38] In addition, our group has recently introduced
the cycloaddition of 1-methyl-3-substituted cyclopropenes with a 1,2-quinone
that displays similar reaction rates.[39] Furthermore, the reaction displays quantitative conversion of the
cyclopropenes toward cycloaddition products under mild conditions,
suggesting its potential. This novel click reaction was efficiently
applied for monolayer functionalization with quantitative yields for
polymer brush modification. In this regard, the small size of the
cyclopropene moiety turned out to be crucial in these crowded environments;
with the larger cyclooctyne moiety, the yields were almost a factor
of 2 lower.[39] This situation is also of
significant importance in bioconjugation reactions, where small reagents
are highly required.[40]Theoretical
studies of such reactions are rapidly advancing due
to a combination of two factors: First, the accuracy of such approaches
continues to increase and can really complement experiment.[41,42] Second, novel analysis methods help experimentally oriented organic
chemists to better understand reaction mechanisms and chemical reactivity
in terms of well-known structural concepts. Specifically, the distortion/interaction
model[43,44] analyzes the barrier toward the transition
state (TS) in terms of the (unfavorable) structural distortion of
the reactants to reach that state and the (favorable) interaction
that takes place between the reaction partners.In the current
study, we investigate the cycloaddition of a range
of cyclopropenes and other cyclic dienes to ortho-quinones by quantum chemical calculations (see Scheme ). For this purpose, we use
(based on their success in previous comparative theoretical studies)[36] dispersion-corrected B97D density functional
theory calculations, complemented by spin component-scaled (SCS)-MP2
calculations and a multiconfiguration method, namely, single-point
domain-based local pair natural orbital coupled cluster (DLPNO)–CCSD(T)
calculations.[36] Finally, the distortion/interaction
model is used to describe the influence of the reactant strain and
approach toward the TS, so as to facilitate the further study and
development of this recent click reaction.
Scheme 1
Reactions under Current
Study Together with Relevant Cyclic Alkenes
and o-Quinones, and a Schematic Depiction of the
Concepts of Distortion and Interaction Energies
Results and Discussion
Reactivity of Different Cycloalkenes with o-Quinone
Starting from previously reported experimental
results, which showed that a 1-methylcyclopropene derivative bearing
the fluorinated ester 1 and carbamate 2 showed
rapid kinetics (k2 = 1.95 and 1.70 M–1 s–1 for 1 and 2, respectively) in the strain-promoted cycloaddition with o-quinones,[39] we performed transition-state
calculations at the B97D/6–311+G(d,p) level of theory. As shown
in a previous work, the replacement of the experimentally used 4-tert-butyl-1,2-benzoquinone 3 by 1,2-benzoquinone 4 did not have a significant effect on the reaction pathway
of the cycloaddition.[36] Consequently, 1,2-benzoquinone 4 was
used to simplify the calculations. Starting with compound 1 given its superior kinetics in solution, the cycloaddition was studied
using this 1-methylcyclopropene as a model compound. The computed
activation Gibbs energies for the endo-cycloaddition
toward quinone 4 were lower (∼1.5 kcal/mol) than
those of the exo-approach. Consequently, we focused
only on the endo-cycloaddition for the compounds
shown in this study. The calculations confirmed our observations[39] that the cycloaddition of 1 and 4 is always preferred on the face away from the 3-substituent
of the cyclopropene, given the asynchronous C···C distances
for the formed C–C bonds (r(C···C)TS = 2.12 and 2.67 Å). These findings showed that the
activation barrier for the cycloaddition of 1-methylcyclopropene 1 with o-quinone via TS-1 is
6.4 kcal/mol, which is 1.6 kcal/mol lower than that of 1-methylcyclopropene 2 via TS-2 (6.4 vs 8.0 kcal/mol, Figure ). Both cycloadditions proceeded
in an exergonic way with a Gibbs energy of reaction of around −27
kcal/mol. To gain more insights into the origins of the activation
barriers of these reactions, we used the distortion/interaction model.[43] As shown in Figure , the cyclopropene distortion energies are
nearly identical, and only small differences arise when comparing
both quinone distortion energies. Therefore, the differences in reactivity
arise from differences in interaction energies, which are related
to the degree of charge transfer in this cycloaddition reaction from
the highest occupied molecular orbital (HOMO) of cyclopropene to the
lowest unoccupied molecular orbital (LUMO) of o-quinone.
Calculations show that the carbamate substituent in 2 decreased the HOMO energy with respect to cyclopropene 1 (−9.96 vs −9.78 eV), thereby increasing the HOMO–LUMO
energy gap and concomitantly the transition-state energy, in line
with experiment. With the aim to evaluate the accuracy of the used
DFT methodology, spin component-scaled (SCS) MP2 and CCSD(T) calculations
were performed for cyclopropenes 17–19 and 23–25 and for fluorinated o-quinones 26−28. Basically, these methods followed the same trends
as the B97D calculations, and are only discussed where relevant; the
complete SCS-MP2 and CCSD(T) data are presented in the Supporting
Information (Tables S2 and S6).)
Figure 1
Chemical structures
of compounds 1–4 and distortion/interaction
analysis for 1 + 4 and 2 + 4 cycloadditions. Cyclopropene distortion energy (blue arrow), o-quinone distortion energy (green arrow), activation energy
(black arrow), and interaction energy (red arrow). Calculated energies
are shown in kcal/mol.
Chemical structures
of compounds 1–4 and distortion/interaction
analysis for 1 + 4 and 2 + 4 cycloadditions. Cyclopropene distortion energy (blue arrow), o-quinone distortion energy (green arrow), activation energy
(black arrow), and interaction energy (red arrow). Calculated energies
are shown in kcal/mol.Given the fast reaction
measured for the strain-promoted reaction
between o-quinones and 1-methyl-3-substituted cyclopropenes,
we investigated the scope of this reaction using other strained cyclic
alkenes, namely, cyclopropene (5), cyclobutene (6), cyclopentene (7), cyclohexene (8), and norbornene (9), to evaluate their potential use
in this novel click reaction (Figure ). In all cases, except for cyclohexene (8), the cycloaddition proceeds through a (near-)synchronous transition
state with two identical C···C distances for the formed
C–C bonds, which decrease as the ring size of the cycloalkane
increases (see Figure ). The cyclopropene reaction has—as expected from the Hammond
principle—the earliest transition state (r(C···C)TS = 2.35 Å) and is the most
exergonic reaction (ΔH = −32.7 kcal/mol).
On the other hand, the reaction with the cyclohexene, which is least
loaded with steric strain, yields the latest TS and is less exothermic
(r(C···C)TS = 2.43 Å
and −6.4 kcal/mol, respectively). According to the computed
reaction profiles for the cycloaddition processes involving the set
of cycloalkenes, the cyclopropene cycloaddition is clearly favored
from both kinetic and thermodynamic points of view.
Figure 2
Activation energies (blue),
interaction energies (purple), cyclopropene
distortion energy (red), and o-quinone distortion
energy (green) computed by means of B97D/6–311+G(d,p). All
energies are given in kcal/mol and distances in Å.
Activation energies (blue),
interaction energies (purple), cyclopropene
distortion energy (red), and o-quinone distortion
energy (green) computed by means of B97D/6–311+G(d,p). All
energies are given in kcal/mol and distances in Å.The energy barrier is also the lowest for cyclopropene (5.5
kcal/mol)
in line with the activation by the ring strain in the reacting alkene.
This observation is indeed reflected in the energy associated with
the structural distortion of reagents to reach the transition state
geometry. In the case of cyclopropene 5 and o-quinone, distortion energies of 7.3 and 8.7 kcal/mol, respectively,
were computed for these two compounds (Figure ). For the rest of cycloalkenes 6–9, the distortion energies were almost 2-fold higher, and in those
TSs, the distortion energy of quinone 4 was also higher
(increasing from 8.7 kcal/mol for the reaction with 5 to 14.1 kcal/mol for the reaction with 6). To the degree
that the reaction rate would be enthalpy-controlled, this would imply
that the reaction rate of cyclopropenes will be orders of magnitude
faster than that of any other cyclic cis-alkene.Given the potential of this relatively novel reaction, we decided
to investigate both counterparts, i.e., the cyclopropene and the quinone,
in more detail. To this end, we studied a wide range of substituents
on both the cyclopropene and the o-quinone.Figure shows the
computed activation strain diagram (ASD) for the cycloaddition reactions
between o-quinone and cyclopropene (black), cyclobutene
(red), cyclopentene (blue), cyclohexene (green), and norbornene (magenta),
from the respective initial reactant complexes to the corresponding
transition states. Although all reactions exhibit rather similar diagrams,
it becomes clear that the interaction between the deformed reactants
is much stronger for the cycloaddition involving cyclohexene than
for the analogous processes involving other cycloalkenes along the
entire reaction coordinate. However, this stronger interaction is
unable to compensate for the lower destabilizing strain energy computed
for the reaction involving the cyclohexene and is therefore responsible
for the higher barrier computed for the cyclohexene system.
Figure 3
Comparative
activation strain diagrams of the cycloaddition reaction
involving o-quinone and cyclopropene (black), cyclobutene
(red), cyclopentene (blue), cyclohexene (green), and norbornene (magenta).
Activation energies (solid lines), distortion energies (dashed lines),
and interaction energies (dotted lines) along the reaction coordinate
projected onto the formed C···C bond distance. All
data have been computed at the B97D/6-311+G(d,p) level of theory.
Comparative
activation strain diagrams of the cycloaddition reaction
involving o-quinone and cyclopropene (black), cyclobutene
(red), cyclopentene (blue), cyclohexene (green), and norbornene (magenta).
Activation energies (solid lines), distortion energies (dashed lines),
and interaction energies (dotted lines) along the reaction coordinate
projected onto the formed C···C bond distance. All
data have been computed at the B97D/6-311+G(d,p) level of theory.
Reactivity of Different Cyclopropene Derivatives
Electronic
Effects on the Cyclopropene Ring
First,
we focused on one of the counterparts of the cycloaddition reaction:
the cyclopropene. For that, a wide variety of cyclopropene derivatives
were selected and evaluated in the cycloaddition reaction toward quinone 4 (see Figure S1 for an overview
of all compounds). In the basic reaction of cyclopropene 5, the cycloaddition proceeds with an activation enthalpy of 4.5 kcal/mol
through a synchronous transition state with a C···C
distance of 2.35 Å. The presence of a methyl group at 1-position
of the double bond in 10 increased the activation barrier
(5.3 kcal/mol). This increase is accompanied by an earlier and nonsynchronous
transition state with C···C distances of 2.11 and 2.71
Å. When analyzing these two TS geometries, a few trends can be
observed. Starting with quinone 4, the C2–C3 distance
(see Figure for atom
labeling) remains unchanged in TS-5 (1.47 Å in the
optimized geometry for quinone 4), but displays a slight
variation in TS-10 (1.45 and 1.49 Å for C2–C3
and C1–C6, respectively). It is noteworthy that the lengthened
bond is associated with the attack from C2 in cyclopropene 10. A look at the C3–C4 distance revealed a short lengthening
from 1.37 Å in quinone 4 to 1.40 Å in TS-5 and TS-10. On the other hand, the C4–C5
distance was slightly shortened from 1.47 Å in quinone 4 to 1.41 Å in both TS structures. More significant variations
were found when evaluating to which degree the quinone was bent, as
a distortion of 24° from the almost planar geometry (4°
of deviation for quinone 4) was calculated for the distorted
quinone in TS-5. Given the unsymmetrical geometry of TS-10, C3 and C6 were 27 and 18° out of the planar geometry,
respectively. When looking at the cyclopropene geometry, the C1–C2
double bond (1.31 Å) was lengthened in the TS structures for 5 and 10, with distances of 1.36 and 1.38 Å,
respectively. C1–C2–H changes from 150 to 142°
in TS-5, and from 150 to 144° and 136° for C2−C1−C4
and C1−C2−H, respectively. Both H atoms at positions
C1 and C2 in 5 are deviated 34° from the original
planar geometry; in contrast, for compound 10, H and
the CH3 group were bent 44 and 25°, respectively in
agreement with the nonsynchronous transition state with the earlier
formation of the C–C at the C2 position.
Figure 4
Labeling of atoms for
compounds 4, 5,
and 10.
A closer inspection
at the distortion energies showed almost similar distortion energies
for the o-quinone (8.7 vs 8.8 kcal/mol for 5 and 10, respectively) but a high difference
in the distortion energies for the cyclopropene (7.3 vs 9.7 kcal/mol
for 5 and 10, respectively), which is reflected
in the activation barrier. According to these B97D/6–311+G(d,p)-calculated
barriers, 5 would react almost four times faster than 10. Although cyclopropenes without substituents at the C1
position showed a higher reactivity with o-quinone,
they also showed a limited stability due to rapid degradation.[45] Consequently, we introduced a methyl group to
the 1-position of the cyclopropene (both experimentally in ref (39) and in most other cyclopropenes
under the current theoretical study) to improve their chemical stability
while still conserving a high reactivity.Labeling of atoms for
compounds 4, 5,
and 10.Next, we incorporated
a higher degree of substitution on the cyclopropene
via a range of 1,3-disubstituted cyclopropenes (see Figure ) and evaluated – first
by DFT – the effect of different groups at the C3 position;
this 3-position in cyclopropenes is typically the position for introduction
of diverse linker architectures with multiple applications in labeling
and bioconjugation.[46−49] Initially, we evaluated the effect of CH2-linked moieties
at the C3 position for compounds bearing an ester (11), an amide (12), and an ether (13). When
compared to the unsubstituted cyclopropene 10, higher
activation enthalpies were found for compounds 11 and 12; on the contrary, for the CH2-linked ether derivative 13, this barrier decreased by 0.3 kcal/mol. In all cases,
the cycloaddition proceeded through a nonsynchronous transition state
with C···C distances of 2.11 and 2.70 Å (for 11 and 13) and 2.09 and 2.77 Å (for 12), the latter having the highest activation energy. A deeper
analysis of the distortion/interaction energies revealed that the
cyclopropene bearing the CH2-linked ether had lower distortion
energies for cyclopropene and o-quinone when compared
to 10, which is supported by a less distorted geometry
in the TS structure. According to these calculations, compounds 10 and 13 would be expected to show a similar
reactivity in the cycloaddition to o-quinone.
Figure 5
Distortion/interaction
analysis for cycloaddition of 10–17 with 4 [B97D/6–311+G(d,p)
data]. Cyclopropene distortion energy (blue arrow), o-quinone distortion energy (green arrow), activation enthalpy (black
arrow), and interaction energy (red arrow). All energies are given
in kcal/mol.
Distortion/interaction
analysis for cycloaddition of 10–17 with 4 [B97D/6–311+G(d,p)
data]. Cyclopropene distortion energy (blue arrow), o-quinone distortion energy (green arrow), activation enthalpy (black
arrow), and interaction energy (red arrow). All energies are given
in kcal/mol.For compounds 14–17 (Figure ), we found that
moderately electron-withdrawing groups (EWG), such as carboxylic acid
(14) or amide (15), increased the barrier
by 2.6 and 1.7 kcal/mol, respectively. However, as shown by Devaraj
and co-workers, simple carboxyamidecyclopropene derivatives have
a limited use in chemical biology due to the lack of stability, as
they degraded quickly overnight at −20 °C.[50] Second, the presence of an adjacent alkene (16) or alkyne (17) increased the barrier by 0.8
and 1.7 kcal/mol, respectively. These were also highly asynchronous,
with C···C distances of 2.11 and 2.71 Å. Overall,
the distortion/interaction analysis showed that EWG groups diminish
the reactivity slightly, which is largely due to increased distortion
energies (see 14 and 15). The variation
in the activation enthalpies caused by the effects of substituents
at the 3-position are similar to the trends in reactivity previously
reported in inverse electron-demand Diels–Alder reactions with
tetrazines and triazines.[51]
Steric Effects
on the Cyclopropene
Next, the steric
effects at the 1-position of the double bond were investigated (Figure ). As mentioned above,
the presence of a methyl group at the 1–position of the internal
double bond (13) increased the activation enthalpy barrier
by 0.7 kcal/mol when compared to the homologous unsubstituted cyclopropene 18. For compound 18, the transition state showed
a synchronous structure with a C···C distance of 2.34
Å and symmetrically distorted structures for the cyclopropene
and o-quinone (21° distorted from the planar
geometry). Although the introduction of the methyl group has a negative
effect on the kinetics of the reaction (vide supra), the starting
1-methylcyclopropenes are much more stable, facilitating experimental
work. Consequently, we evaluated the steric effects on this position.
Interestingly, the presence of an ethyl (19), propyl
(20), or iso-propyl (21) group did not have a significant effect on the activation barrier
(Figure ). A closer
inspection of the TS structures reveals nonsynchronous transition
states for compounds 13, 19, 20, and 21, with C···C distances of 2.09
and 2.72 Å for 13 and 19, respectively,
being the shorter distance that corresponds to the unsubstituted 2-position.
It is noteworthy that for cyclopropenes 20 and 21, the C···C distance for the new bond corresponding
to the substituted 1-position increased to 2.82 Å. Given the
asynchronous character of the TS, the o-quinone showed
an unsymmetrically bended structure with deviations of 11 and 22°
from the planar geometry. On the other hand, the presence of methyl
groups at both 1- and 2-positions of the double bond (22) resulted in a synchronous transition state with a C···C
distance of 2.31 Å and symmetrically distorted structures for
cyclopropene and o-quinone (with a distortion of
22° from the planar geometry), which was reflected in an increase
in the activation barrier by 2.0 kcal/mol when compared to the unsubstituted
cyclopropene 18. We analyzed the activation barriers
for these reactions using the distortion/interaction model. In all
cases, the o-quinone distortion energies were almost
identical (between 8.4 kcal/mol for the propyl-substituted cyclopropenes 20 and 21 and 8.8 kcal/mol for the unsubstituted 18).
Figure 6
Distortion/interaction analysis for cycloaddition of 13 and 18–22 with 4 [B97D/6–311+G(d,p)
data]. Cyclopropene distortion energy (blue arrow), quinone distortion
energy (green arrow), activation enthalpy (black arrow), and interaction
energy (red arrow). All energies are given in kcal/mol.
Distortion/interaction analysis for cycloaddition of 13 and 18–22 with 4 [B97D/6–311+G(d,p)
data]. Cyclopropene distortion energy (blue arrow), quinone distortion
energy (green arrow), activation enthalpy (black arrow), and interaction
energy (red arrow). All energies are given in kcal/mol.Finally, the effect of EWG groups at the 1-position of the
double
bond was also analyzed at the B97D/6-311+G(d,p) level of theory (Figure ). Similar trends
were observed at the SCS-MP2/def2-TZVP level of theory (see Tables S2 and S3 in the Supporting Information).
For that purpose, the methyl group in this position (13) was replaced by a CH2F (23), CHF2F (24), or CF3 (25) group, which
had a stabilizing effect on the TS as activation barriers were lowered
by 0.4–1.1 kcal/mol. In this regard, the incorporation of the
1-fluoromethyl group lowered the activation barrier to 4.3 kcal/mol
compared to that of 1-methylcyclopropene (23). Incorporating
more F atoms increased the enthalpic barrier up again to 4.9 and 5.0
kcal/mol for the difluoromethyl (24) and trifluoromethyl
(25) derivatives, respectively. For this set of fluorinated
compounds, later and nonsynchronous transition states were observed
with C–C distances in the range of 2.2–2.5 Å. The
fluorination effect is analogous to the azide cycloaddition with cyclooctyne
and fluorinated compounds, namely, monofluorocyclooctyne (MOFO) and
monofluorocyclooctyne (DIFO), as studied by Gold et al.[52] As shown in Figure S2, monofluorination at the CH2 group adjacent to the triple
bond increased the cyclopropene HOMO energy (reducing the energy gap)
and might result in stabilization of the transition state through
increased hyperconjugative interactions of the in-plane and out-of-plane
π-bond of the cyclooctyne with the σ*C–F in the
transition-state geometry, as described for the SPAAC reaction. However,
in the case of cyclopropene derivatives, this effect is weaker relative
to azides because cyclopropene contains only one π-bond. The
incorporation of the second and third fluorine atoms provides only
a small amount of stabilization because of the less than ideal overlap
with the cyclopropene π-bond and the electron-withdrawing effects
that lower the cyclopropene HOMO energy counter to the hyperconjugative
stabilization, resulting in a lower reactivity compared to the methyl
group. A good correlation between the activation enthalpy and the
HOMO energy of the cyclopropene was observed (ΔHmethanol‡ = −2.71EHOMO – 20.93, R2 =
0.9563; see Figure S2).
Figure 7
Distortion/interaction
analysis for cycloaddition of 13, 23, 24, and 25 with 4 [B97D/6-311+G(d,p)
data]. Cyclopropene distortion energy
(blue arrow), o-quinone distortion energy (green
arrow), activation enthalpy (black arrow), and interaction energy
(red arrow). All energies are given in kcal/mol.
Distortion/interaction
analysis for cycloaddition of 13, 23, 24, and 25 with 4 [B97D/6-311+G(d,p)
data]. Cyclopropene distortion energy
(blue arrow), o-quinone distortion energy (green
arrow), activation enthalpy (black arrow), and interaction energy
(red arrow). All energies are given in kcal/mol.The distortion energies required for activation of the o-quinone are again very similar; however, increased fluorination
increases the distortion energies of the cyclopropene derivatives.
Here, the monofluoro CH2F substituent seems to hold the
sweet spot as its low cyclopropene distortion energy leads to an overall
reduction in the activation enthalpy, also when compared to 13, which makes this compound of interest for future experimental
studies.
Reactivity of Different o-Quinones
Next, we focused on electronic variations in the o-quinone, using 13 as the constant cyclopropene
(Scheme ). To that
end, we
evaluated and compared the parent o-quinone 4 with fluorine substitution at the 3- and 6-positions (3,6-difluoro o-quinone, 26), at the 4- and 5-positions (4,5-difluoro o-quinone, 27), and o-fluoranil
(tetrafluoro-o-benzoquinone, 28), which
has been previously studied by Lemal et al. in Diels–Alder
reactions.[53]
Scheme 2
Cyclopropene Cycloaddition
with Different o-Quinones
Activation enthalpies were calculated at B97D/6-311+G(d,p), SCS-MP2/def2-TZVP,
and CCSD(T)/cc-pVTZ//MP2/def2-TZVP levels of theory. TS optimization
(at the different levels of calculation) showed that the cycloaddition
proceeds through a nonsynchronous transition state with C···C
distances of 2.04 and 2.15 Å, as shown in Figure . According to B97D/6-311+G(d,p) calculations,
the incorporation of F atoms at the 3- and 6-positions lowered the
activation enthalpy slightly (0.6 kcal/mol) compared to 4, whereas the presence of F atoms at the 4- and 5-positions increased
the activation enthalpy (1.7 kcal/mol). In the case of the tetrafluorinated o-fluoranil, with the earliest TS, the activation enthalpy
was the highest in the series, being 10.1 kcal/mol. For SCS-MP2, similar
activation barriers were computed, while for the single-point CCSD(T)
calculations, the calculated barriers were 1.9–4.2 kcal/mol
higher than those obtained using the B97D functional. If the CCSD(T)
calculations are correct, then this would lead to a much larger dependence
on the quinone structure than if B97D or SCS-MP2 data are correct;
this clearly awaits CCSD(T) calculations in which the TS geometry
can also be optimized, as both the distortion and interaction parameters
are highly geometry dependent.
Figure 8
B97D/6-311+G(d,p)-optimized TS structures
of cyclopropene 13 and fluorinated quinones 26 and 27. Activation enthalpies (in kcal/mol) computed
at B97D/6-311+G(d,p).
Cyclopropene distortion energy (blue arrow), o-quinone
distortion energy (green arrow), activation enthalpy (black arrow),
and interaction energy (red arrow). LUMO energies for ground-state
quinones 4, 26, 27, and 28.
B97D/6-311+G(d,p)-optimized TS structures
of cyclopropene 13 and fluorinated quinones 26 and 27. Activation enthalpies (in kcal/mol) computed
at B97D/6-311+G(d,p).
Cyclopropene distortion energy (blue arrow), o-quinone
distortion energy (green arrow), activation enthalpy (black arrow),
and interaction energy (red arrow). LUMO energies for ground-state
quinones 4, 26, 27, and 28.A closer look at the activation strain diagrams
of the cycloaddition
reaction involving cyclopropene 17 and o-quinones 4, 26, 27, and 28 (Figure ) reveals that all cycloadditions exhibit rather similar ASDs; it
becomes clear that the interaction between the deformed reactants
is much stronger for the cycloaddition involving 26 than
for the analogous processes along the entire reaction coordinate.
Figure 9
Comparative
activation strain diagrams of the cycloaddition reaction
involving cyclopropene 17 and o-quinones 4 (black), 26 (red), 27 (blue),
and 28 (green). Activation energies (solid lines), distortion
energies (dashed lines), and interaction energies (dotted lines) along
the reaction coordinate projected onto the formed C···C
bond distance. All data have been computed at the B97D/6–311+G(d,p)
level of theory.
Comparative
activation strain diagrams of the cycloaddition reaction
involving cyclopropene 17 and o-quinones 4 (black), 26 (red), 27 (blue),
and 28 (green). Activation energies (solid lines), distortion
energies (dashed lines), and interaction energies (dotted lines) along
the reaction coordinate projected onto the formed C···C
bond distance. All data have been computed at the B97D/6–311+G(d,p)
level of theory.The difference in reactivity
can be rationalized through a closer
inspection of the distortion energies. On one hand, for the highly
reactive 3,6-fluorinated quinone 26, the total distortion
energy (B97D: 18.6 kcal/mol; SCS-MP2: 14.9 kcal/mol) is slightly higher
when compared to the non-fluorinated quinone (B97D: 18.0 kcal/mol;
SCS-MP2: 15.6 kcal/mol), which is associated with the lower distortion
energy of the cyclopropene. On the other hand, for the slower 4,5-fluorinated
quinone 27, the distortion energy increased (B97D: 19.8
kcal/mol; SCS-MP2: 19.2 kcal/mol), which was obtained from a higher
distortion energy of both the cyclopropene and the quinone. The electron-withdrawing
groups at positions 3 and 6 in compound 26 lower the
LUMO energy, decreasing the gap with the HOMO of cyclopropene, when
compared to compound 27 with F atoms at positions 4 and
5 (−0.42 vs −0.18 eV). For the tetrafluorinated o-fluoranil, the total distortion energy was found to be
higher (B97D: 21.7 kcal/mol) and the calculated LUMO energy was −0.66
eV. Accordingly, we envision that 3,6-fluorinated o-quinone 26 would be a good candidate to be synthesized
and studied experimentally in the cyclopropene cycloaddition due to
its fast kinetics.
Conclusions
A quantum chemical study
of the cycloaddition reaction between
strained cyclic alkenes and ortho-quinones indicates
that this novel click reaction proceeds concertedly with a rather
synchronous formation of C···C bonds. A detailed distortion–interaction
analysis reveals that for this type of reaction the distortion energy
required to reach the transition state is typically of the same order
as the overall interaction energy, yielding low reaction enthalpic
barriers throughout (typically 4–8 kcal/mol). Specifically,
the use of well-placed fluorine atoms in both the cyclopropene and
the ortho-quinone is evaluated to allow for an even
further reduction in this barrier, showing the potential of this reaction
within the tool box of click chemistries, especially given the small
size of the cyclopropene compared to, e.g., activated trans-cyclooctenes and cyclooctynes.
Experimental
Section
Computational Methods
All DFT geometry optimizations
were performed with the dispersion-corrected B97D functional and 6-311+G(d,p)
basis set as implemented within the Gaussian 16 series of programs.
Solvent effects were included with the conductor-like polarizable
continuum model (CPCM) to mimic methanol during both geometry optimizations
and vibrational analysis. All of the energies and enthalpies presented
for the reactant complex (RC), transition state (TS), and product
(P) are given in Hartree. All of the energies have been corrected
with zero-point energies (ZPE). Vibrational frequency calculations
were made at the same level of theory used for optimization. All transition
states were verified to have only one negative eigenvalue in the Hessian
matrix, describing the motion along the reaction coordinate. Furthermore,
the calculated activation enthalpies and reaction enthalpies are given
for every reaction in kcal/mol. Every geometry on the reaction coordinates
is separated into cycloalkene and quinone parts. Distortion energy
is calculated as the energy difference between the energy of distorted
cycloalkene and quinone parts and the energy of the fully optimized
cycloalkene and quinone parts. The interaction energy is calculated
as the energy difference between the energy of the geometry on the
reaction coordinate and the energy of the relative distorted cycloalkene
and quinone parts. When the distortion, interaction, and total energies
are plotted, the formed C···C bond is used to represent
the reaction coordinate.Ab initio calculations for geometry
optimization, frequency analysis, and thermodynamic calculations were
based on SCS-MP2/def2-TZVP and SCS-MP2/COSMO(PTE)/def2-TZVP calculations
using the ORCA[54] and Turbomole[55] programs. Using the optimized geometries, basis
set extrapolation to the complete basis set limit (CBS) was performed
for activation energy barriers ΔE⧧, which for SCS-MP2 and DLPNO-CCSD(T) were based on cc-pVTZ and cc-pVQZ
basis set calculations, respectively. These extrapolated ΔECBS⧧ values have been corrected
for ZPE and thermal contributions and solvent effects as obtained
using the SCS-MP2/def2-TZVP results.[56] The
resulting values are denoted ΔECBS,solv⧧ for the respective method.
Authors: Christopher D McNitt; Hazel Cheng; Susanne Ullrich; Vladimir V Popik; Matthew Bjerknes Journal: J Am Chem Soc Date: 2017-09-26 Impact factor: 15.419
Authors: Dong-Dong Liang; Dieuwertje E Streefkerk; Daan Jordaan; Jorden Wagemakers; Jacob Baggerman; Han Zuilhof Journal: Angew Chem Int Ed Engl Date: 2020-03-11 Impact factor: 15.336