| Literature DB >> 33063678 |
Hae-Sun Chung1, Jeong Su Park2, Bo-Moon Shin3.
Abstract
BACKGROUND: Various methods are used for the diagnosis of Clostridioides difficile infection (CDI). We systematically analyzed and investigated the performance of current laboratory diagnostic methods for CDI.Entities:
Keywords: Clostridioides difficile; Clostridioides difficile infection; Laboratory diagnostic methods; Meta-analysis; Systematic review
Mesh:
Substances:
Year: 2021 PMID: 33063678 PMCID: PMC7591293 DOI: 10.3343/alm.2021.41.2.171
Source DB: PubMed Journal: Ann Lab Med ISSN: 2234-3806 Impact factor: 3.464
Pooled sensitivities and specificities of index tests
| Index test | Studies (N) | Sensitivity (%) | 95% CI | Specificity (%) | 95% CI |
|---|---|---|---|---|---|
| Compared with TC | |||||
| Well-type GDH EIA | |||||
| C. diff Chek-60 | 3 | 93.1 | 88.0–96.5 | 99.1 | 98.5–99.5 |
| RIDA QUICK | 1 | 81.7 | 69.6–90.5 | 91.1 | 88.1–93.6 |
| RIDASCREEN GDH | 1 | 88.3 | 77.4–95.2 | 91.1 | 88.1–93.6 |
| Membrane-type GDH EIA | |||||
| C. Diff Quik Chek Complete | 6 | 92.5 | 88.8–95.3 | 91.8 | 90.1–93.4 |
| Automated GDH EIA | |||||
| LIAISON | 2 | 99.1 | 95.2–100.0 | 96.0 | 94.4–97.3 |
| VIDAS | 1 | 96.4 | 87.5–99.6 | 85.2 | 79.7–89.6 |
| Well-type toxin AB EIA | |||||
| 3 | 67.4 | 59.9–74.3 | 91.0 | 88.0–93.5 | |
| Remel ProSpecT | 1 | 60.9 | 40.8–77.8 | 91.3 | 82.3–96.0 |
| RIDASCREEN | 3 | 42.4 | 34.8–50.2 | 99.4 | 98.5–99.8 |
| Membrane-type toxin AB EIA | |||||
| C. Diff Quik Chek Complete | 5 | 48.5 | 41.5–55.6 | 98.4 | 97.4–99.0 |
| ImmunCard Toxins A & B | 1 | 40.0 | 22.7–59.4 | 99.1 | 95.1–100.0 |
| RIDA QUICK | 1 | 55.0 | 41.6–67.9 | 99.1 | 97.7–99.8 |
| X/Pect Toxin A/B | 1 | 27.3 | 13.3–45.5 | 100.0 | 95.8–100.0 |
| Automated toxin AB EIA | |||||
| LIAISON | 2 | 63.0 | 52.8–72.4 | 95.2 | 92.1–97.3 |
| VIDAS | 9 | 63.2 | 59.6–66.6 | 96.7 | 96.0–97.3 |
| NAAT | |||||
| AdvanSure CD | 2 | 89.2 | 74.6–97.0 | 98.3 | 96.1–99.4 |
| AmpliVue | 3 | 91.9 | 88.3–94.8 | 91.7 | 89.9–93.3 |
| artus | 2 | 98.8 | 93.5–100.0 | 91.7 | 88.4–94.3 |
| BD GeneOhm Cdiff | 2 | 96.6 | 91.4–99.1 | 97.3 | 95.4–98.5 |
| BD MAX Cdiff | 6 | 90.3 | 87.0–93.0 | 97.2 | 96.2–98.0 |
| Cobas Cdiff | 1 | 92.9 | 87.4–96.1 | 98.7 | 97.4–99.4 |
| GenomEra | 1 | 91.8 | 84.5–96.4 | 99.1 | 95.1–99.9 |
| GenoType Cdiff | 1 | 86.7 | 69.3–96.2 | 88.3 | 80.8–93.6 |
| Illumigene | 6 | 89.7 | 86.6–92.3 | 94.1 | 92.9–95.1 |
| IMDx | 2 | 73.6 | 66.4–79.9 | 96.4 | 94.2–98.0 |
| Lyra Direct | 2 | 85.9 | 81.9–89.3 | 98.3 | 97.6–98.9 |
| PCRFast | 1 | 76.3 | 59.8–88.5 | 98.1 | 95.6–99.7 |
| Seeplex Diarrhea-B1 ACE detection | 1 | 90.0 | 80.5–95.9 | 97.1 | 93.4–99.0 |
| Simplexa | 2 | 88.4 | 81.3–93.5 | 99.4 | 97.0–100.0 |
| Verigene CDF | 2 | 95.2 | 86.7–99.0 | 96.8 | 91.9–99.1 |
| Xpert | 11 | 93.6 | 91.3–95.4 | 95.2 | 94.2–96.1 |
| Compared with C. | |||||
| Well-type GDH EIA | |||||
| C. diff Chek-60 | 1 | 88.1 | 73.6–95.5 | 99.6 | 97.5–100.0 |
| RIDASCREEN GDH | 1 | 87.8 | 78.2–94.3 | 93.7 | 90.9–95.8 |
| Membrane-type GDH EIA | |||||
| C. Diff Quik Chek Complete | 1 | 94.1 | 85.6–98.3 | 94.6 | 91.7–96.7 |
| C. Diff Quik Chek-60 | 2 | 94.3 | 92.3–95.9 | 96.0 | 95.3–96.6 |
| Automated GDH EIA | |||||
| LIAISON C. | 1 | 100.0 | 89.6–100.0 | 96.5 | 93.3–98.3 |
| VIDAS C. | 4 | 95.4 | 93.9–96.7 | 90.9 | 89.9–91.7 |
*Multiplex PCR test that detects the genes of multiple pathogens that cause multiple diarrhea, including C. difficile toxin genes.
Abbreviations: CI, confidence interval; TC, toxigenic culture; GDH, glutamate dehydrogenase; EIA, enzyme immunoassay; NAAT, nucleic acid amplification test.
Fig. 1Summary of the selection process for studies in international databases (A) and Korean studies in international and Korean databases (B).
Pooled sensitivities and specificities of the different types of index tests in the 39 studies
| Type | Test | Compared with CCNA | Compared with TC | Compared with | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Studies (N) | Sensitivity (%) | 95% CI | Specificity (%) | 95% CI | Studies (N) | Sensitivity (%) | 95% CI | Specificity (%) | 95% CI | Studies (N) | Sensitivity (%) | 95% CI | Specificity (%) | 95% CI | ||
| GDH EIA | Total | 4 | 93.4 | 89.8–96.1 | 91.8 | 90.4–93.1 | 11 | 92.7 | 90.6–94.5 | 94.3 | 93.6–95.0 | 7 | 94.6 | 93.5–95.6 | 93.6 | 93.1–94.1 |
| Well-type | 1 | 100.0 | 86.2–100.0 | 95.3 | 92.1–97.5 | 4 | 89.6 | 85.4–92.9 | 96.0 | 95.1–96.7 | 2 | 87.9 | 80.6–93.2 | 95.9 | 94.1–97.3 | |
| Membrane-type | 2 | 92.0 | 87.6–95.2 | 91.2 | 89.3–92.9 | 6 | 92.5 | 88.8–95.3 | 91.8 | 90.1–93.4 | 3 | 94.3 | 92.4–95.8 | 95.8 | 95.2–96.4 | |
| Automated | 1 | 100.0 | 86.2–100.0 | 90.6 | 86.5–93.7 | 3 | 98.2 | 94.9–99.6 | 93.6 | 91.8–95.0 | 5 | 95.6 | 94.1–96.8 | 91.2 | 90.3–92.0 | |
| Toxin AB EIA | Total | 5 | 60.3 | 56.0–64.6 | 97.6 | 96.9–98.2 | 18 | 57.9 | 55.4–60.3 | 97.0 | 96.6–97.4 | |||||
| Well-type | 4 | 62.6 | 56.6–68.4 | 96.7 | 95.2–97.9 | 5 | 55.4 | 50.2–60.6 | 95.8 | 94.5–96.9 | ||||||
| Membrane-type | 2 | 54.5 | 47.7–61.1 | 99.1 | 98.3–99.6 | 7 | 46.8 | 41.3–52.4 | 98.7 | 98.0–99.1 | ||||||
| Automated | 1 | 88.0 | 68.8–97.3 | 94.9 | 91.6–97.2 | 11 | 63.2 | 59.8–66.4 | 96.6 | 95.9–97.2 | ||||||
| NAAT | Total | 3 | 90.1 | 86.5–93.0 | 94.4 | 93.2–95.4 | 24 | 90.0 | 88.9–91.0 | 95.8 | 95.4–96.2 | |||||
Abbreviations: CCNA, cell cytotoxicity neutralization assay; CI, confidence interval; NAAT, nucleic acid amplification test; TC, toxigenic culture.
Comparison of pooled sensitivities and specificities of categories of tests compared with TC between foreign and Korean studies
| Type | Test | Foreign | Korean | Foreign | Korean | Foreign | Korean | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Studies (N) | Sensitivity (%) | 95% CI | Sensitivity (%) | 95% CI | Specificity (%) | 95% CI | Specificity (%) | 95% CI | |||||
| GDH EIA | Total | 8 | 3 | 92.4 | 89.9–94.5 | 93.6 | 89.1–96.6 | 0.72 | 95.1 | 94.3–95.8 | 91.5 | 89.5–93.3 | < 0.01 |
| Well-type | 4 | 89.6 | 85.4–92.9 | 96.0 | 95.1–96.7 | ||||||||
| Membrane-type | 4 | 2 | 92.6 | 87.2–96.3 | 92.4 | 86.5–96.3 | 0.87 | 89.4 | 86.3–92.0 | 93.6 | 91.5–95.4 | 0.01 | |
| Automated | 2 | 1 | 99.1 | 95.2–100.0 | 96.4 | 87.5–99.6 | 0.25 | 96.0 | 94.4–97.3 | 85.2 | 79.7–89.6 | < 0.01 | |
| Toxin AB EIA | Total | 8 | 10 | 51.3 | 47.0–55.6 | 61.3 | 58.3–64.3 | < 0.01 | 98.2 | 97.6–98.7 | 96.3 | 95.7–96.8 | < 0.01 |
| Well-type | 3 | 2 | 56.7 | 48.8–64.4 | 54.4 | 47.3–61.4 | 0.74 | 98.4 | 97.3–99.1 | 87.4 | 82.9–91.1 | < 0.01 | |
| Membrane-type | 5 | 2 | 43.0 | 36.7–49.5 | 57.5 | 46.4–68.0 | 0.03 | 98.9 | 98.1–99.4 | 98.3 | 97.1–99.1 | 0.41 | |
| Automated | 3 | 8 | 60.0 | 51.0–68.5 | 63.7 | 60.1–67.2 | 0.48 | 96.3 | 93.9–97.9 | 96.6 | 95.9–97.2 | 0.83 | |
| NAAT | Total | 14 | 10 | 91.6 | 90.3–92.8 | 87.0 | 84.9–88.9 | < 0.01 | 95.9 | 95.5–96.4 | 95.5 | 94.8–96.2 | 0.37 |
P was calculated using Fisher’s exact test or the chi-square test, as appropriate.
Abbreviations: CI, confidence interval; GDH, glutamate dehydrogenase; EIA, enzyme immunoassay; NAAT, nucleic acid amplification test; TC, toxigenic culture.
Comparison of pooled sensitivities and specificities of the different types of index tests compared with TC between automated and non-automated methods
| Type | Test | Studies (N) | Sensitivity (%) | 95% CI | Specificity (%) | 95% CI | ||
|---|---|---|---|---|---|---|---|---|
| GDH EIA | Automated | 3 | 98.2 | 94.9–99.6 | < 0.01 | 93.6 | 91.8–95.0 | 0.23 |
| Non-automated | 10 | 91.1 | 88.4–93.3 | 94.6 | 93.7–95.3 | |||
| Toxin AB EIA | Automated | 11 | 63.2 | 59.8–66.4 | < 0.01 | 96.6 | 95.9–97.2 | 0.03 |
| Non-automated | 12 | 51.4 | 47.6–55.1 | 97.5 | 96.9–98.0 |
P was calculated using by Fisher’s exact test or the chi-square test, as appropriate.
Abbreviations: TC, toxigenic culture; GDH, glutamate dehydrogenase; EIA, enzyme immunoassay.
Hypothetical PPV and NPV for different types of index tests in 39 studies at CDI prevalence of 5%, 10%, 20%, and 50%
| Type | Test | CDI prevalence | |||||||
|---|---|---|---|---|---|---|---|---|---|
| 5% | 10% | 20% | 50% | ||||||
| PPV | NPV | PPV | NPV | PPV | NPV | PPV | NPV | ||
| GDH EIA | Total | 47.5 | 99.6 | 65.6 | 99.1 | 81.1 | 98.1 | 94.5 | 92.8 |
| Well-type | 54.1 | 99.4 | 71.3 | 98.8 | 84.8 | 97.4 | 95.7 | 90.2 | |
| Membrane-type | 37.3 | 99.6 | 55.6 | 99.1 | 73.8 | 98.0 | 91.9 | 92.4 | |
| Automated | 44.7 | 99.9 | 63.0 | 99.8 | 79.3 | 99.5 | 93.9 | 98.1 | |
| Toxin AB EIA | Total | 50.4 | 97.8 | 68.2 | 95.4 | 82.8 | 90.2 | 95.1 | 69.7 |
| Well-type | 41.0 | 97.6 | 59.4 | 95.1 | 76.7 | 89.6 | 93.0 | 68.2 | |
| Membrane-type | 65.5 | 97.2 | 80.0 | 94.3 | 90.0 | 88.1 | 97.3 | 65.0 | |
| Automated | 49.5 | 98.0 | 67.4 | 95.9 | 82.3 | 91.3 | 94.9 | 72.4 | |
| NAAT | Total | 53.0 | 99.5 | 70.4 | 98.9 | 84.3 | 97.5 | 95.5 | 90.5 |
Abbreviations: CDI, Clostridioides difficile infection; GDH, glutamate dehydrogenase; EIA, enzyme immunoassay; NAAT, nucleic acid amplification test; PPV, positive predictive value; NPV, negative predictive value.