Literature DB >> 33049216

Modeling Fibrillogenesis of Collagen-Mimetic Molecules.

Anne E Hafner1, Noemi G Gyori2, Ciaran A Bench2, Luke K Davis3, Anđela Šarić4.   

Abstract

One of the most robust examples of self-assembly in living organisms is the formation of collagen architectures. Collagen type I molecules are a crucial component of the extracellular matrix, where they self-assemble into fibrils of well-defined axial striped patterns. This striped fibrillar pattern is preserved across the animal kingdom and is important for the determination of cell phenotype, cell adhesion, and tissue regulation and signaling. The understanding of the physical processes that determine such a robust morphology of self-assembled collagen fibrils is currently almost completely missing. Here, we develop a minimal coarse-grained computational model to identify the physical principles of the assembly of collagen-mimetic molecules. We find that screened electrostatic interactions can drive the formation of collagen-like filaments of well-defined striped morphologies. The fibril axial pattern is determined solely by the distribution of charges on the molecule and is robust to the changes in protein concentration, monomer rigidity, and environmental conditions. We show that the striped fibrillar pattern cannot be easily predicted from the interactions between two monomers but is an emergent result of multibody interactions. Our results can help address collagen remodeling in diseases and aging and guide the design of collagen scaffolds for biotechnological applications.
Copyright © 2020 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2020        PMID: 33049216      PMCID: PMC7677131          DOI: 10.1016/j.bpj.2020.09.013

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  29 in total

1.  D-periodic collagen-mimetic microfibers.

Authors:  Shyam Rele; Yuhua Song; Robert P Apkarian; Zheng Qu; Vincent P Conticello; Elliot L Chaikof
Journal:  J Am Chem Soc       Date:  2007-11-07       Impact factor: 15.419

2.  Thermal memory in self-assembled collagen fibril networks.

Authors:  Martijn de Wild; Wim Pomp; Gijsje H Koenderink
Journal:  Biophys J       Date:  2013-07-02       Impact factor: 4.033

3.  Electrostatic effects in collagen fibril formation.

Authors:  Svetlana Morozova; Murugappan Muthukumar
Journal:  J Chem Phys       Date:  2018-10-28       Impact factor: 3.488

4.  How electrostatic networks modulate specificity and stability of collagen.

Authors:  Hongning Zheng; Cheng Lu; Jun Lan; Shilong Fan; Vikas Nanda; Fei Xu
Journal:  Proc Natl Acad Sci U S A       Date:  2018-05-29       Impact factor: 11.205

5.  Variation in type I collagen fibril nanomorphology: the significance and origin.

Authors:  Ming Fang; Mark M Banaszak Holl
Journal:  Bonekey Rep       Date:  2013-08-21

6.  Origins and implications of the D stagger in collagen.

Authors:  B B Doyle; D W Hukins; D J Hulmes; A Miller; C J Rattew; J Woodhead-Galloway
Journal:  Biochem Biophys Res Commun       Date:  1974-09-23       Impact factor: 3.575

7.  Analysis of the primary structure of collagen for the origins of molecular packing.

Authors:  D J Hulmes; A Miller; D A Parry; K A Piez; J Woodhead-Galloway
Journal:  J Mol Biol       Date:  1973-09-05       Impact factor: 5.469

8.  Periodic charge distributions in the myosin rod amino acid sequence match cross-bridge spacings in muscle.

Authors:  A D McLachlan; J Karn
Journal:  Nature       Date:  1982-09-16       Impact factor: 49.962

9.  Collagen fibril surface displays a constellation of sites capable of promoting fibril assembly, stability, and hemostasis.

Authors:  J P R O Orgel; O Antipova; I Sagi; A Bitler; D Qiu; R Wang; Y Xu; J D San Antonio
Journal:  Connect Tissue Res       Date:  2010-11-30       Impact factor: 3.417

10.  In vitro fibrillogenesis of collagen type I in varying ionic and pH conditions.

Authors:  J Robin Harris; Andrei Soliakov; Richard J Lewis
Journal:  Micron       Date:  2013-03-31       Impact factor: 2.251

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  2 in total

1.  Effects of size, cooperativity, and competitive binding on protein positioning on DNA.

Authors:  Leo S McCormack; Artem K Efremov; Jie Yan
Journal:  Biophys J       Date:  2021-03-23       Impact factor: 4.033

2.  Collagen fibril assembly: New approaches to unanswered questions.

Authors:  Christopher K Revell; Oliver E Jensen; Tom Shearer; Yinhui Lu; David F Holmes; Karl E Kadler
Journal:  Matrix Biol Plus       Date:  2021-07-13
  2 in total

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