Literature DB >> 21117898

Collagen fibril surface displays a constellation of sites capable of promoting fibril assembly, stability, and hemostasis.

J P R O Orgel1, O Antipova, I Sagi, A Bitler, D Qiu, R Wang, Y Xu, J D San Antonio.   

Abstract

Fibrillar collagens form the structural basis of organs and tissues including the vasculature, bone, and tendon. They are also dynamic, organizational scaffolds that present binding and recognition sites for ligands, cells, and platelets. We interpret recently published X-ray diffraction findings and use atomic force microscopy data to illustrate the significance of new insights into the functional organization of the collagen fibril. These data indicate that collagen's most crucial functional domains localize primarily to the overlap region, comprising a constellation of sites we call the "master control region." Moreover, the collagen's most exposed aspect contains its most stable part-the C-terminal region that controls collagen assembly, cross-linking, and blood clotting. Hidden beneath the fibril surface exists a constellation of "cryptic" sequences poised to promote hemostasis and cell-collagen interactions in tissue injury and regeneration. These findings begin to address several important, and previously unresolved, questions: How functional domains are organized in the fibril, which domains are accessible, and which require proteolysis or structural trauma to become exposed? Here we speculate as to how collagen fibrillar organization impacts molecular processes relating to tissue growth, development, and repair.

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Year:  2010        PMID: 21117898      PMCID: PMC3244825          DOI: 10.3109/03008207.2010.511354

Source DB:  PubMed          Journal:  Connect Tissue Res        ISSN: 0300-8207            Impact factor:   3.417


  36 in total

1.  Collagen fibril architecture, domain organization, and triple-helical conformation govern its proteolysis.

Authors:  Shiamalee Perumal; Olga Antipova; Joseph P R O Orgel
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-14       Impact factor: 11.205

2.  The structure of collagen fibrils.

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Authors:  J A Werkmeister; J A Ramshaw; G Ellender
Journal:  Eur J Biochem       Date:  1990-01-26

4.  Algorithms for finding the axis of a helix: fast rotational and parametric least-squares methods.

Authors:  J A Christopher; R Swanson; T O Baldwin
Journal:  Comput Chem       Date:  1996-09

5.  Collagen fibril surface: TMAFM, FEG-SEM and freeze-etching observations.

Authors:  M Raspanti; A Alessandrini; P Gobbi; A Ruggeri
Journal:  Microsc Res Tech       Date:  1996-09-01       Impact factor: 2.769

6.  Electron microscopy shows periodic structure in collagen fibril cross sections.

Authors:  D J Hulmes; J C Jesior; A Miller; C Berthet-Colominas; C Wolff
Journal:  Proc Natl Acad Sci U S A       Date:  1981-06       Impact factor: 11.205

7.  Radial packing, order, and disorder in collagen fibrils.

Authors:  D J Hulmes; T J Wess; D J Prockop; P Fratzl
Journal:  Biophys J       Date:  1995-05       Impact factor: 4.033

8.  Direct visualization of protease action on collagen triple helical structure.

Authors:  Gabriel Rosenblum; Philippe E Van den Steen; Sidney R Cohen; Arkady Bitler; David D Brand; Ghislain Opdenakker; Irit Sagi
Journal:  PLoS One       Date:  2010-06-16       Impact factor: 3.240

9.  Proteodermatan and proteokeratan sulfate (decorin, lumican/fibromodulin) proteins are horseshoe shaped. Implications for their interactions with collagen.

Authors:  J E Scott
Journal:  Biochemistry       Date:  1996-07-09       Impact factor: 3.162

10.  Backbone dynamics of (Pro-Hyp-Gly)10 and a designed collagen-like triple-helical peptide by 15N NMR relaxation and hydrogen-exchange measurements.

Authors:  P Fan; M H Li; B Brodsky; J Baum
Journal:  Biochemistry       Date:  1993-12-07       Impact factor: 3.162

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  14 in total

Review 1.  Finding the weakest link: exploring integrin-mediated mechanical molecular pathways.

Authors:  Pere Roca-Cusachs; Thomas Iskratsch; Michael P Sheetz
Journal:  J Cell Sci       Date:  2012-07-13       Impact factor: 5.285

2.  Internal strain drives spontaneous periodic buckling in collagen and regulates remodeling.

Authors:  Andrew Dittmore; Jonathan Silver; Susanta K Sarkar; Barry Marmer; Gregory I Goldberg; Keir C Neuman
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-11       Impact factor: 11.205

3.  Modeling Fibrillogenesis of Collagen-Mimetic Molecules.

Authors:  Anne E Hafner; Noemi G Gyori; Ciaran A Bench; Luke K Davis; Anđela Šarić
Journal:  Biophys J       Date:  2020-09-23       Impact factor: 4.033

4.  Crystallographic texture and elemental composition mapped in bovine root dentin at the 200 nm level.

Authors:  A C Deymier-Black; A Veis; Z Cai; S R Stock
Journal:  Scanning       Date:  2013-04-29       Impact factor: 1.932

5.  Cell regulation of collagen fibril macrostructure during corneal morphogenesis.

Authors:  Elena Koudouna; Eric Mikula; Donald J Brown; Robert D Young; Andrew J Quantock; James V Jester
Journal:  Acta Biomater       Date:  2018-08-29       Impact factor: 8.947

Review 6.  The dentin organic matrix - limitations of restorative dentistry hidden on the nanometer scale.

Authors:  Luiz E Bertassoni; Joseph P R Orgel; Olga Antipova; Michael V Swain
Journal:  Acta Biomater       Date:  2012-03-10       Impact factor: 8.947

7.  Proline provides site-specific flexibility for in vivo collagen.

Authors:  Wing Ying Chow; Chris J Forman; Dominique Bihan; Anna M Puszkarska; Rakesh Rajan; David G Reid; David A Slatter; Lucy J Colwell; David J Wales; Richard W Farndale; Melinda J Duer
Journal:  Sci Rep       Date:  2018-09-14       Impact factor: 4.379

Review 8.  Tumour Initiation: a Discussion on Evidence for a "Load-Trigger" Mechanism.

Authors:  John J Evans; Maan M Alkaisi; Peter H Sykes
Journal:  Cell Biochem Biophys       Date:  2019-10-09       Impact factor: 2.194

9.  Variation in the helical structure of native collagen.

Authors:  Joseph P R O Orgel; Anton V Persikov; Olga Antipova
Journal:  PLoS One       Date:  2014-02-24       Impact factor: 3.240

Review 10.  Revealing Accessibility of Cryptic Protein Binding Sites within the Functional Collagen Fibril.

Authors:  Cody L Hoop; Jie Zhu; Ana Monica Nunes; David A Case; Jean Baum
Journal:  Biomolecules       Date:  2017-11-01
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