Literature DB >> 33049212

Emerging Roles for Phase Separation in Plants.

Ryan J Emenecker1, Alex S Holehouse2, Lucia C Strader3.   

Abstract

The plant cell internal environment is a dynamic, intricate landscape composed of many intracellular compartments. Cells organize some cellular components through formation of biomolecular condensates-non-stoichiometric assemblies of protein and/or nucleic acids. In many cases, phase separation appears to either underly or contribute to the formation of biomolecular condensates. Many canonical membraneless compartments within animal cells form in a manner that is at least consistent with phase separation, including nucleoli, stress granules, Cajal bodies, and numerous additional bodies, regulated by developmental and environmental stimuli. In this Review, we examine the emerging roles for phase separation in plants. Further, drawing on studies carried out in other organisms, we identify cellular phenomenon in plants that might also arise via phase separation. We propose that plants make use of phase separation to a much greater extent than has been previously appreciated, implicating phase separation as an evolutionarily ancient mechanism for cellular organization.
Copyright © 2020 Elsevier Inc. All rights reserved.

Keywords:  biomolecular condensates; condensates; phase separation; phase separation in plants

Year:  2020        PMID: 33049212      PMCID: PMC7577370          DOI: 10.1016/j.devcel.2020.09.010

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  154 in total

1.  Nuclear localization and in vivo dynamics of a plant-specific serine/arginine-rich protein.

Authors:  Gul Shad Ali; Maxim Golovkin; Anireddy S N Reddy
Journal:  Plant J       Date:  2003-12       Impact factor: 6.417

2.  Live Cell Imaging Reveals the Relocation of dsRNA Binding Proteins Upon Viral Infection.

Authors:  Deborah A Barton; Elke F Roovers; Quentin Gouil; Guilherme C da Fonseca; Rodrigo S Reis; Craig Jackson; Robyn L Overall; Adriana F Fusaro; Peter M Waterhouse
Journal:  Mol Plant Microbe Interact       Date:  2017-05-01       Impact factor: 4.171

3.  FCA mediates thermal adaptation of stem growth by attenuating auxin action in Arabidopsis.

Authors:  Hyo-Jun Lee; Jae-Hoon Jung; Lucas Cortés Llorca; Sang-Gyu Kim; Sangmin Lee; Ian T Baldwin; Chung-Mo Park
Journal:  Nat Commun       Date:  2014-11-17       Impact factor: 14.919

Review 4.  Organization and Function of Non-dynamic Biomolecular Condensates.

Authors:  Jeffrey B Woodruff; Anthony A Hyman; Elvan Boke
Journal:  Trends Biochem Sci       Date:  2017-12-16       Impact factor: 13.807

Review 5.  Paraspeckles: Where Long Noncoding RNA Meets Phase Separation.

Authors:  Archa H Fox; Shinichi Nakagawa; Tetsuro Hirose; Charles S Bond
Journal:  Trends Biochem Sci       Date:  2017-12-27       Impact factor: 13.807

6.  Composition-dependent thermodynamics of intracellular phase separation.

Authors:  Joshua A Riback; Lian Zhu; Mylene C Ferrolino; Michele Tolbert; Diana M Mitrea; David W Sanders; Ming-Tzo Wei; Richard W Kriwacki; Clifford P Brangwynne
Journal:  Nature       Date:  2020-05-06       Impact factor: 49.962

Review 7.  Composition and function of P bodies in Arabidopsis thaliana.

Authors:  Luis D Maldonado-Bonilla
Journal:  Front Plant Sci       Date:  2014-05-14       Impact factor: 5.753

8.  Polyubiquitin chain-induced p62 phase separation drives autophagic cargo segregation.

Authors:  Daxiao Sun; Rongbo Wu; Jingxiang Zheng; Pilong Li; Li Yu
Journal:  Cell Res       Date:  2018-03-05       Impact factor: 25.617

9.  Phase separation of 53BP1 determines liquid-like behavior of DNA repair compartments.

Authors:  Sinan Kilic; Aleksandra Lezaja; Marco Gatti; Eliana Bianco; Jone Michelena; Ralph Imhof; Matthias Altmeyer
Journal:  EMBO J       Date:  2019-07-01       Impact factor: 11.598

10.  Tudor-SN, a component of stress granules, regulates growth under salt stress by modulating GA20ox3 mRNA levels in Arabidopsis.

Authors:  Chunxia Yan; Zongyun Yan; Yizheng Wang; Xiaoyuan Yan; Yuzhen Han
Journal:  J Exp Bot       Date:  2014-09-09       Impact factor: 6.992

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  17 in total

1.  Phylogenetic convergence of phase separation and mitotic function in the disordered protein BuGZ.

Authors:  Alexander F Chin; Yixian Zheng; Vincent J Hilser
Journal:  Protein Sci       Date:  2022-02-12       Impact factor: 6.725

Review 2.  Malectin-like receptor kinases as protector deities in plant immunity.

Authors:  Fausto Andres Ortiz-Morea; Jun Liu; Libo Shan; Ping He
Journal:  Nat Plants       Date:  2021-12-20       Impact factor: 17.352

3.  The emerging role of biomolecular condensates in plant immunity.

Authors:  Wei Wang; Yangnan Gu
Journal:  Plant Cell       Date:  2022-04-26       Impact factor: 12.085

Review 4.  Co-Transcriptional RNA Processing in Plants: Exploring from the Perspective of Polyadenylation.

Authors:  Jing Yang; Ying Cao; Ligeng Ma
Journal:  Int J Mol Sci       Date:  2021-03-24       Impact factor: 5.923

Review 5.  Nucleocytoplasmic partitioning as a mechanism to regulate Arabidopsis signaling events.

Authors:  Jeffrey R Allen; Lucia C Strader
Journal:  Curr Opin Cell Biol       Date:  2021-02-20       Impact factor: 8.382

6.  Differing biophysical properties underpin the unique signaling potentials within the plant phytochrome photoreceptor families.

Authors:  E Sethe Burgie; Zachary T K Gannam; Katrice E McLoughlin; Christopher D Sherman; Alex S Holehouse; Robert J Stankey; Richard D Vierstra
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-01       Impact factor: 11.205

Review 7.  Biological Phase Separation and Biomolecular Condensates in Plants.

Authors:  Ryan J Emenecker; Alex S Holehouse; Lucia C Strader
Journal:  Annu Rev Plant Biol       Date:  2021-03-08       Impact factor: 28.310

8.  Membrane nanodomains modulate formin condensation for actin remodeling in Arabidopsis innate immune responses.

Authors:  Zhiming Ma; Yanbiao Sun; Xinlu Zhu; Liang Yang; Xu Chen; Yansong Miao
Journal:  Plant Cell       Date:  2022-01-20       Impact factor: 12.085

9.  Sequence determinants of in cell condensate morphology, dynamics, and oligomerization as measured by number and brightness analysis.

Authors:  Ryan J Emenecker; Alex S Holehouse; Lucia C Strader
Journal:  Cell Commun Signal       Date:  2021-06-05       Impact factor: 5.712

Review 10.  Roles of Plant Glycine-Rich RNA-Binding Proteins in Development and Stress Responses.

Authors:  Liqun Ma; Ke Cheng; Jinyan Li; Zhiqi Deng; Chunjiao Zhang; Hongliang Zhu
Journal:  Int J Mol Sci       Date:  2021-05-29       Impact factor: 5.923

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