| Literature DB >> 32959497 |
Gerard M O'Reilly1,2,3, Rob D Mitchell1,2, Biswadev Mitra1,2,3, Hamed Akhlaghi4, Viet Tran5,6, Jeremy S Furyk7,8, Paul Buntine9,10, Holly Bannon-Murphy1, Timothy Amos1, Maushmi Udaya Kumar10, Emma Perkins10, Alexandra Prentice4, Olivia Szwarcberg4, Ashley Loughman5,11, Nicole Lowry7, Steven Colwell9, Michael P Noonan1,3,12, Ryan Hiller1, Andrew Paton1,13, De Villiers Smit1,2,3, Peter A Cameron1,2.
Abstract
OBJECTIVE: The aim of the present study was to describe the epidemiology and clinical features of patients presenting to the ED with suspected and confirmed COVID-19.Entities:
Keywords: COVID-19; emergency; isolation; quality improvement; registry
Mesh:
Year: 2020 PMID: 32959497 PMCID: PMC7536936 DOI: 10.1111/1742-6723.13651
Source DB: PubMed Journal: Emerg Med Australas ISSN: 1742-6723 Impact factor: 2.279
Submitted cases for analysis and report by site
| Site | Total number of ED presentations | Total adult cases tested for SARS‐CoV‐2, | SARS‐CoV‐2 positive, | SARS‐CoV‐2 negative, | Case data included in Tables | Case data included in Table |
|---|---|---|---|---|---|---|
| The Alfred Hospital | 4420 | 1111 (25) | 12 (1) | 1099 (99) | All | All |
| University Hospital Geelong | 5614 | 283 (5) | 6 (2) | 277 (98) | All | SARS‐CoV‐2 positive |
| Box Hill Hospital | 4510 | 983 (22) | 12 (1) | 971 (99) | SARS‐CoV‐2 positive | SARS‐CoV‐2 positive |
| Launceston General Hospital | 3512 | 97 (3) | 0 (0) | 97 (100) | All | SARS‐CoV‐2 positive |
| Mersey Community Hospital | 1504 | 23 (2) | 0 (0) | 23 (100) | All | SARS‐CoV‐2 positive |
| North West Regional Hospital | 2264 | 33 (1) | 0 (0) | 33 (100) | All | SARS‐CoV‐2 positive |
| Royal Hobart Hospital | 5309 | 183 (3) | 1 (1) | 182 (99) | All | SARS‐CoV‐2 positive |
| St Vincent's Hospital Melbourne | 3245 | 204 (6) | 19 (9) | 185 (91) | All | All |
| Total | 30 378 | 2917 (10) | 50 (2) | 2867 (98) |
All ages.
Testing criteria as per Box 1, plus any patient transferred to a private hospital.
No patient who tested positive for SARS‐CoV‐2 at Box Hill Hospital was tested based on the expanded local criteria.
No SARS‐CoV‐2 positive cases in study period.
Baseline demographic and ED arrival details by SARS‐CoV‐2 result from ED polymerase chain reaction
| Variable | SARS‐CoV‐2 test positive | SARS‐CoV‐2 test negative | OR (95% CI) |
|
|---|---|---|---|---|
| Age (years), mean (SD) | 53 (22) | 56 (22) | 1.0 (1.0–1.0) | 0.38 |
| Sex, | ||||
| Male | 24 (48) | 950 (50) | 0.9 (0.5–1.6) | 0.76 |
| Mode of transport, | ||||
| Private transport/other | 7 (14) | 742 (39) | Reference group | |
| Ambulance – road | 38 (76) | 1042 (55) | 3.9 (1.7–8.7) | 0.001 |
| Ambulance – helicopter | 0 (0) | 12 (1) | – | – |
| Public transport | 5 (10) | 97 (5) | 5.5 (1.7–17.6) | 0.004 |
| Triage category, median (IQR) | 3 (3,4) | 3 (3,3) | NA | 0.16 |
| Triage category, | ||||
| 1 | 0 (0) | 45 (2) | Reference group | |
| 2 | 6 (12) | 400 (21) | 0.4 (0.2–1.1) | 0.09 |
| 3 | 30 (60) | 983 (52) | 0.9 (0.5–1.7) | 0.72 |
| 4 | 14 (27) | 408 (22) | – | – |
| 5 | 0 (0) | 57 (3) | – | – |
For Box Hill Hospital, only SARS‐CoV‐2 positive cases included.
CI, confidence interval; IQR, interquartile range; NA, not applicable; OR, odds ratio; SD, standard deviation; – , category omitted from estimation because of perfect prediction (empty cell) or collinearity.
Outcomes by result of ED SARS‐CoV‐2 test
| Variable | SARS‐CoV‐2 test positive | SARS‐CoV‐2 test negative | OR (95% CI) |
|
|---|---|---|---|---|
| Invasive mechanical ventilation in ED, | ||||
| Yes | 0 (0) | 33 (2) | – | – |
| Disposition destination from ED, | ||||
| Home | 22 (44) | 636 (34) | Reference group | |
| Died in ED | 0 (0) | 2 (0) | – | – |
| ICU | 2 (4) | 63 (3) | 0.9 (0.2–4.0) | 0.91 |
| OT | 0 (0) | 16 (1) | – | – |
| Ward (not ICU) | 24 (48) | 773 (41) | 0.9 (0.5–1.6) | 0.73 |
| ED short stay unit | 2 (4) | 323 (17) | 0.2 (0.0–0.8) | 0.02 |
| Transfer to other hospital | 0 (0) | 52 (3) | – | – |
| DAMA | 0 (0) | 20 (1) | – | – |
| Other | 0 (0) | 7 (0) | – | – |
| Invasive mechanical ventilation in hospital, | ||||
| Yes | 2 (4) | 45 (2) | 1.7 (0.4–7.3) | 0.47 |
| Discharge destination from hospital, | ||||
| Home | 41 (82) | 1547 (82) | Reference group | – |
| Died in hospital | 2 (4) | 46 (2) | 1.6 (0.4–7.0) | 0.50 |
| Residential aged care facility | 2 (4) | 57 (3) | 1.3 (0.3–5.6) | 0.70 |
| Transfer to other hospital | 2 (4) | 149 (8) | 0.5 (0.1–2.1) | 0.35 |
| Discharge against medical advice | 0 (0) | 54 (3) | – | – |
| Hospital in the home | 0 (0) | 8 (0) | – | – |
| Other (includes current inpatients) | 3 (6) | 27 (1) | 4.2 (1.2–14.4) | 0.02 |
For Box Hill Hospital, only SARS‐CoV‐2 positive cases included.
CI, confidence interval; ICU, intensive care unit; OR, odds ratio; OT, operating theatre; –, category omitted from estimation because of perfect prediction (empty cell).
Results of analysis to determine univariable association and predictive performance of variables with being SARS‐CoV‐2 positive among patients tested for SARS‐CoV‐2 in the ED
| Variable | Missing >20% (yes/no) | Subgroups | SARS‐CoV‐2 test positive | SARS‐CoV‐2 test negative | OR (95% CI), | Positive likelihood ratio | Negative likelihood ratio | Parsimonious model OR (95% CI), |
|---|---|---|---|---|---|---|---|---|
| Presenting complaint | ||||||||
| Shortness of breath | No | Yes | 26 (57) | 529 (47) | 1.5 (0.8–2.6), 0.22 | – | – | – |
| Cough | No | Yes | 32 (68) | 421 (38) | 3.5 (1.9–6.6), <0.001 | 1.8 | 0.5 | – |
| Anosmia or dysgeusia | Yes | Yes | 10 (29) | 32 (4) | 11.4 (5.0–25.9), <0.001 | 8.4 | 0.7 | – |
| Sore throat | No | Yes | 15 (42) | 270 (26) | 2.1 (1.1–4.1), 0.03 | 1.6 | 0.8 | – |
| Runny nose | No | Yes | 12 (32) | 276 (26) | 1.3 (0.6–2.6), 0.48 | – | – | – |
| Fever | No | Yes | 39 (78) | 383 (34) | 6.8 (3.5–13.5), <0.001 | 2.3 | 0.3 | 14.5 (3.0–69.2), 0.001 |
| Fatigue | Yes | Yes | 22 (58) | 271 (29) | 3.4 (1.8–6.6), <0.001 | 2.0 | 0.6 | – |
| Myalgia | Yes | Yes | 13 (34) | 139 (15) | 3.0 (1.5–5.9), 0.002 | 2.3 | 0.8 | – |
| Diarrhoea | No | Yes | 5 (13) | 99 (10) | 1.3 (0.5–3.4), 0.59 | – | – | – |
| Number of days since first symptom, median (IQR) | No | 3 (2,5) | 2 (1,5) | 0.10 | ||||
| Other relevant history | ||||||||
|
Overseas | Yes | Yes | 0 (0) | 1 (0) | – | |||
| Contact with a confirmed case | Yes | Yes | 23 (50) | 35 (4) | 26.6 (13.6–52.0), <0.001 | 13.8 | 0.5 | – |
| Residential aged care facility | No | Yes | 4 (8) | 98 (9) | 0.9 (0.3–2.6), 0.87 | – | – | – |
| Healthcare worker | No | Yes | 2 (4) | 52 (5) | 0.8 (0.2–3.5), 0.80 | – | – | – |
| Previous SARS‐CoV‐2 swab (within 14 days prior to the ED presentation) | No | SARS‐CoV‐2 negative | 3 (7) | 137 (11) | Reference | |||
| SARS‐CoV‐2 positive | 15 (36) | 18 (1) | 38.1 (10.0–144.4), <0.001 | 25.3 | 0.7 | – | ||
| Swab result unknown | 3 (7) | 34 (3) | 4.0 (0.8–20.9), 0.10 | – | – | – | ||
| No prior swab | 21 (50) | 1087 (85) | 0.9 (0.3–3.0), 0.84 | – | – | – | ||
| Comorbidities | ||||||||
| Chronic respiratory | No | Yes | 12 (25) | 292 (27) | 0.9 (0.5–1.8), 0.77 | – | – | – |
| Obesity | No | Yes | 4 (9) | 154 (17) | 0.5 (0.2–1.4), 0.20 | – | – | – |
| Smoker | Yes | Yes | 4 (10) | 376 (38) | 0.2 (0.1–0.5), 0.002 | 0.3 | 1.5 | 0.1 (0.0–1.0), 0.05 |
| Chronic cardiac | No | Yes | 7 (15) | 281 (26) | 0.5 (0.2–1.1), 0.10 | – | – | – |
| Hypertension | No | Yes | 9 (19) | 376 (35) | 0.4 (0.2–0.9), 0.03 | 0.5 | 1.2 | – |
| Diabetes mellitus | No | Yes | 10 (21) | 186 (17) | 1.3 (0.6–2.6), 0.54 | – | – | – |
| Malignant neoplasm | No | Yes | 1 (2) | 91 (9) | 0.2 (0.0–1.7), 0.15 | – | – | – |
| Immunosuppressive pharmacotherapy | No | Yes | 2 (4) | 104 (10) | 0.4 (0.1–1.7), 0.23 | – | – | – |
| Examination – first vital signs in ED | ||||||||
| Temperature | No | NA | 37.1 (0.9) | 36.6 (0.9) | 2.3 (1.6–3.2), <0.001 | – | – | – |
|
Fever recorded | Yes | 6 (12) | 58 (5) | 2.8 (1.1–6.7), 0.03 | 2.5 | 0.9 | – | |
| SaO2 (%), mean (SD) | No | NA | 96 (5) | 97 (3) | 0.9 (0.9–1.0), 0.002 | – | – | – |
| Hypoxia (SaO2 <92%), | Yes | 4 (8) | 58 (5) | 1.8 (0.6–5.2), 0.28 | – | – | – | |
| Systolic blood pressure (mmHg), mean (SD) | No | NA | 130 (20) | 137 (26) | 1.0 (1.0–1.0), 0.07 | – | – | – |
| Hypotension (SBP <100 mmHg), | Yes | 2 (4) | 59 (5) | 0.9 (0.2–3.6), 0.84 | – | – | – | |
| Examination – other | ||||||||
| Abnormality on chest auscultation, | Yes | Yes | 16 (35) | 293 (29) | 1.3 (0.7–2.4), 0.39 | – | – | – |
| Investigations – imaging | ||||||||
| CXR report, | Yes | No | 14 (37) | 502 (60) | Reference | |||
| Yes – bilateral infiltrates | 14 (37) | 47 (6) | 10.7 (4.8–23.7), <0.001 | 6.6 | 0.7 | 11.3 (2.7–47.7), <0.001 | ||
| Yes – other abnormality | 10 (26) | 295 (35) | 1.2 (0.5–2.8), 0.64 | – | – | – | ||
| Investigations – blood tests | ||||||||
| WCC (×109/L), mean (SD) | No | NA | 6 (3) | 10 (7) | 0.7 (0.6–0.8), <0.001 | – | – | – |
|
Leucocytosis (WCC >11.0 (×109/L)), | Yes | 2 (4) | 339 (29) | 0.1 (0.0–0.5), 0.003 | 0.2 | 1.3 | 0.1 (0.0–0.8), 0.03 | |
| Platelet count (×109/L), mean (SD) | No | NA | 218 (94) | 245 (91) | 1.0 (1.0–1.0), 0.05 | – | – | – |
| Thrombocytopenia (platelet count <150 × 109/L), | Yes | 6 (14) | 141 (12) | 1.1 (0.5–2.7), 0.78 | – | – | – | |
| AIC | 106 | |||||||
| AUROC | 0.86 (0.78–0.95) | |||||||
SARS‐CoV‐2 positive cases are defined in this COVED report as having a SARS‐CoV‐2 test during their ED presentation for which the result is positive for SARS‐CoV‐2.
Includes only SARS‐CoV‐2‐positive case data from Barwon Health, Box Hill Hospital and Tasmanian Health Services.
Clinical variables with a statistically significant univariable association with a SARS‐CoV‐2 positive test in ED (i.e. excluding patients with a positive SARS‐CoV‐2 test in the previous 14 days or contact with a person confirmed as SARS‐CoV‐2 positive).
One of the criteria for testing (i.e. inclusion in the present study).
May not have been performed.
AIC, Akaike information criteria; AUROC, area under the receiver operating characteristic curve; CI, confidence interval; IQR, interquartile range; NA, not applicable; OR, odds ratio; SBP, systolic blood pressure; WCC, white blood cell count; –, not meeting criteria for calculation of likelihood ratios (no statistically significant association with SARS‐CoV‐2 test result) and/or not included in final parsimonious prediction model.
|
Any patient meeting the following criteria: Fever OR chills in the absence of an alternative diagnosis that explains the clinical presentation OR Acute respiratory infection (e.g. cough, sore throat, shortness of breath, runny nose, loss or change in sense of smell or taste). OR Onset of other clinical symptoms associated with COVID‐19 (e.g. headache, myalgia, stuffy nose, nausea, vomiting, diarrhoea) AND any of the following epidemiological criteria: Close contacts of a confirmed case of coronavirus (COVID‐19) Returned overseas travel in the past 14 days Healthcare or aged care workers
Additional testing criteria for Box Hill ED in July 2020 included any patient transferred to a private hospital. However, this was not the indication for SAR‐CoV‐2 testing for any of the SAR‐CoV‐2 positive patients included in this analysis. Patients meeting the above testing criteria in St Vincent's Hospital ED were included in this analysis if they were triaged to the designated primary suspected COVID‐19 area in ED.
Any patient with the following symptoms at any point in the last 7 days: fever or history of fever (e.g. night sweats, chills), rhinorrhoea, cough, sore throat, shortness of breath or loss of smell or taste. |