Literature DB >> 32958644

Enabling early detection of osteoarthritis from presymptomatic cartilage texture maps via transport-based learning.

Shinjini Kundu1,2, Beth G Ashinsky3, Mustapha Bouhrara3, Erik B Dam4, Shadpour Demehri5, Mohammad Shifat-E-Rabbi6, Richard G Spencer3, Kenneth L Urish7,8,9,10,11, Gustavo K Rohde6,12.   

Abstract

Many diseases have no visual cues in the early stages, eluding image-based detection. Today, osteoarthritis (OA) is detected after bone damage has occurred, at an irreversible stage of the disease. Currently no reliable method exists for OA detection at a reversible stage. We present an approach that enables sensitive OA detection in presymptomatic individuals. Our approach combines optimal mass transport theory with statistical pattern recognition. Eighty-six healthy individuals were selected from the Osteoarthritis Initiative, with no symptoms or visual signs of disease on imaging. On 3-y follow-up, a subset of these individuals had progressed to symptomatic OA. We trained a classifier to differentiate progressors and nonprogressors on baseline cartilage texture maps, which achieved a robust test accuracy of 78% in detecting future symptomatic OA progression 3 y prior to symptoms. This work demonstrates that OA detection may be possible at a potentially reversible stage. A key contribution of our work is direct visualization of the cartilage phenotype defining predictive ability as our technique is generative. We observe early biochemical patterns of fissuring in cartilage that define future onset of OA. In the future, coupling presymptomatic OA detection with emergent clinical therapies could modify the outcome of a disease that costs the United States healthcare system $16.5 billion annually. Furthermore, our technique is broadly applicable to earlier image-based detection of many diseases currently diagnosed at advanced stages today.

Entities:  

Keywords:  3D transport-based morphometry; T2 imaging; classification; early diagnosis; osteoarthritis

Mesh:

Year:  2020        PMID: 32958644      PMCID: PMC7547154          DOI: 10.1073/pnas.1917405117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  41 in total

1.  Penalized Fisher Discriminant Analysis and Its Application to Image-Based Morphometry.

Authors:  Wei Wang; Yilin Mo; John A Ozolek; Gustavo K Rohde
Journal:  Pattern Recognit Lett       Date:  2011-11-01       Impact factor: 3.756

2.  Radiological assessment of osteo-arthrosis.

Authors:  J H KELLGREN; J S LAWRENCE
Journal:  Ann Rheum Dis       Date:  1957-12       Impact factor: 19.103

3.  Validation study of WOMAC: a health status instrument for measuring clinically important patient relevant outcomes to antirheumatic drug therapy in patients with osteoarthritis of the hip or knee.

Authors:  N Bellamy; W W Buchanan; C H Goldsmith; J Campbell; L W Stitt
Journal:  J Rheumatol       Date:  1988-12       Impact factor: 4.666

4.  A continuous linear optimal transport approach for pattern analysis in image datasets.

Authors:  Soheil Kolouri; Akif B Tosun; John A Ozolek; Gustavo K Rohde
Journal:  Pattern Recognit       Date:  2016-03-01       Impact factor: 7.740

5.  Machine learning classification of OARSI-scored human articular cartilage using magnetic resonance imaging.

Authors:  B G Ashinsky; C E Coletta; M Bouhrara; V A Lukas; J M Boyle; D A Reiter; C P Neu; I G Goldberg; R G Spencer
Journal:  Osteoarthritis Cartilage       Date:  2015-06-09       Impact factor: 6.576

6.  T1rho, T2 and focal knee cartilage abnormalities in physically active and sedentary healthy subjects versus early OA patients--a 3.0-Tesla MRI study.

Authors:  Robert Stahl; Anthony Luke; Xiaojuan Li; Julio Carballido-Gamio; C Benjamin Ma; Sharmila Majumdar; Thomas M Link
Journal:  Eur Radiol       Date:  2008-08-16       Impact factor: 5.315

7.  A linear optimal transportation framework for quantifying and visualizing variations in sets of images.

Authors:  Wei Wang; Dejan Slepčev; Saurav Basu; John A Ozolek; Gustavo K Rohde
Journal:  Int J Comput Vis       Date:  2013-01-01       Impact factor: 7.410

8.  Optimal Mass Transport: Signal processing and machine-learning applications.

Authors:  Soheil Kolouri; Serim Park; Matthew Thorpe; Dejan Slepčev; Gustavo K Rohde
Journal:  IEEE Signal Process Mag       Date:  2017-07-11       Impact factor: 12.551

Review 9.  Machine-learning-based patient-specific prediction models for knee osteoarthritis.

Authors:  Afshin Jamshidi; Jean-Pierre Pelletier; Johanne Martel-Pelletier
Journal:  Nat Rev Rheumatol       Date:  2019-01       Impact factor: 20.543

10.  Wndchrm - an open source utility for biological image analysis.

Authors:  Lior Shamir; Nikita Orlov; D Mark Eckley; Tomasz Macura; Josiah Johnston; Ilya G Goldberg
Journal:  Source Code Biol Med       Date:  2008-07-08
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  10 in total

1.  Reply to Roemer and Guermazi: Early biochemical changes on MRI can predict risk of symptomatic progression.

Authors:  Shinjini Kundu; Beth G Ashinsky; Mustapha Bouhrara; Erik B Dam; Shadpour Demehri; M Shifat-E-Rabbi; Richard G Spencer; Kenneth L Urish; Gustavo K Rohde
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-16       Impact factor: 11.205

2.  Biochemical cartilage changes based on MRI-defined T2 relaxation times do not equal OA detection.

Authors:  Frank W Roemer; Ali Guermazi
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-16       Impact factor: 11.205

Review 3.  Artificial intelligence: A new tool in surgeon's hand.

Authors:  Amit Gupta; Tanuj Singla; Jaine John Chennatt; Lena Elizabath David; Shaik Sameer Ahmed; Deepak Rajput
Journal:  J Educ Health Promot       Date:  2022-03-23

Review 4.  Epigenetic Regulation of Chondrocytes and Subchondral Bone in Osteoarthritis.

Authors:  Hope C Ball; Andrew L Alejo; Trinity K Samson; Amanda M Alejo; Fayez F Safadi
Journal:  Life (Basel)       Date:  2022-04-14

Review 5.  Artificial intelligence in arthroplasty.

Authors:  Glen Purnomo; Seng-Jin Yeo; Ming Han Lincoln Liow
Journal:  Arthroplasty       Date:  2021-11-02

6.  Use of machine learning in osteoarthritis research: a systematic literature review.

Authors:  Encarnita Mariotti-Ferrandiz; Jérémie Sellam; Marie Binvignat; Valentina Pedoia; Atul J Butte; Karine Louati; David Klatzmann; Francis Berenbaum
Journal:  RMD Open       Date:  2022-03

Review 7.  Discovering Knee Osteoarthritis Imaging Features for Diagnosis and Prognosis: Review of Manual Imaging Grading and Machine Learning Approaches.

Authors:  Yun Xin Teoh; Khin Wee Lai; Juliana Usman; Siew Li Goh; Hamidreza Mohafez; Khairunnisa Hasikin; Pengjiang Qian; Yizhang Jiang; Yuanpeng Zhang; Samiappan Dhanalakshmi
Journal:  J Healthc Eng       Date:  2022-02-18       Impact factor: 2.682

8.  Feasibility and application of machine learning enabled fast screening of poly-beta-amino-esters for cartilage therapies.

Authors:  Stefano Perni; Polina Prokopovich
Journal:  Sci Rep       Date:  2022-08-20       Impact factor: 4.996

9.  Single nucleotide polymorphism genes and mitochondrial DNA haplogroups as biomarkers for early prediction of knee osteoarthritis structural progressors: use of supervised machine learning classifiers.

Authors:  Hossein Bonakdari; Jean-Pierre Pelletier; Francisco J Blanco; Ignacio Rego-Pérez; Alejandro Durán-Sotuela; Dawn Aitken; Graeme Jones; Flavia Cicuttini; Afshin Jamshidi; François Abram; Johanne Martel-Pelletier
Journal:  BMC Med       Date:  2022-09-12       Impact factor: 11.150

10.  Optimization of spin-lock times for T mapping of human knee cartilage with bi- and stretched-exponential models.

Authors:  Hector L de Moura; Rajiv G Menon; Marcelo V W Zibetti; Ravinder R Regatte
Journal:  Sci Rep       Date:  2022-10-07       Impact factor: 4.996

  10 in total

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