Literature DB >> 29962824

Optimal Mass Transport: Signal processing and machine-learning applications.

Soheil Kolouri, Serim Park, Matthew Thorpe, Dejan Slepčev, Gustavo K Rohde.   

Abstract

Transport-based techniques for signal and data analysis have received increased attention recently. Given their ability to provide accurate generative models for signal intensities and other data distributions, they have been used in a variety of applications including content-based retrieval, cancer detection, image super-resolution, and statistical machine learning, to name a few, and shown to produce state of the art results in several applications. Moreover, the geometric characteristics of transport-related metrics have inspired new kinds of algorithms for interpreting the meaning of data distributions. Here we provide a practical overview of the mathematical underpinnings of mass transport-related methods, including numerical implementation, as well as a review, with demonstrations, of several applications. Software accompanying this tutorial is available at [43].

Entities:  

Year:  2017        PMID: 29962824      PMCID: PMC6024256          DOI: 10.1109/MSP.2017.2695801

Source DB:  PubMed          Journal:  IEEE Signal Process Mag        ISSN: 1053-5888            Impact factor:   12.551


  6 in total

1.  AN EFFICIENT NUMERICAL METHOD FOR THE SOLUTION OF THE L(2) OPTIMAL MASS TRANSFER PROBLEM.

Authors:  Eldad Haber; Tauseef Rehman; Allen Tannenbaum
Journal:  SIAM J Sci Comput       Date:  2010       Impact factor: 2.373

2.  The Radon Cumulative Distribution Transform and Its Application to Image Classification.

Authors:  Soheil Kolouri; Se Rim Park; Gustavo K Rohde
Journal:  IEEE Trans Image Process       Date:  2015-12-17       Impact factor: 10.856

3.  Detecting and visualizing cell phenotype differences from microscopy images using transport-based morphometry.

Authors:  Saurav Basu; Soheil Kolouri; Gustavo K Rohde
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-18       Impact factor: 11.205

4.  A continuous linear optimal transport approach for pattern analysis in image datasets.

Authors:  Soheil Kolouri; Akif B Tosun; John A Ozolek; Gustavo K Rohde
Journal:  Pattern Recognit       Date:  2016-03-01       Impact factor: 7.740

5.  A linear optimal transportation framework for quantifying and visualizing variations in sets of images.

Authors:  Wei Wang; Dejan Slepčev; Saurav Basu; John A Ozolek; Gustavo K Rohde
Journal:  Int J Comput Vis       Date:  2013-01-01       Impact factor: 7.410

6.  Accurate diagnosis of thyroid follicular lesions from nuclear morphology using supervised learning.

Authors:  John A Ozolek; Akif Burak Tosun; Wei Wang; Cheng Chen; Soheil Kolouri; Saurav Basu; Hu Huang; Gustavo K Rohde
Journal:  Med Image Anal       Date:  2014-04-21       Impact factor: 8.545

  6 in total
  10 in total

1.  Radon Cumulative Distribution Transform Subspace Modeling for Image Classification.

Authors:  Mohammad Shifat-E-Rabbi; Xuwang Yin; Abu Hasnat Mohammad Rubaiyat; Shiying Li; Soheil Kolouri; Akram Aldroubi; Jonathan M Nichols; Gustavo K Rohde
Journal:  J Math Imaging Vis       Date:  2021-08-05       Impact factor: 1.627

2.  PARTITIONING SIGNAL CLASSES USING TRANSPORT TRANSFORMS FOR DATA ANALYSIS AND MACHINE LEARNING.

Authors:  Akram Aldroubi; Shiying Li; Gustavo K Rohde
Journal:  Sampl Theory Signal Process Data Anal       Date:  2021-05-11

3.  Parametric Signal Estimation Using the Cumulative Distribution Transform.

Authors:  Abu Hasnat Mohammad Rubaiyat; Kyla M Hallam; Jonathan M Nichols; Meredith N Hutchinson; Shiying Li; Gustavo K Rohde
Journal:  IEEE Trans Signal Process       Date:  2020-05-25       Impact factor: 4.931

4.  Enabling early detection of osteoarthritis from presymptomatic cartilage texture maps via transport-based learning.

Authors:  Shinjini Kundu; Beth G Ashinsky; Mustapha Bouhrara; Erik B Dam; Shadpour Demehri; Mohammad Shifat-E-Rabbi; Richard G Spencer; Kenneth L Urish; Gustavo K Rohde
Journal:  Proc Natl Acad Sci U S A       Date:  2020-09-21       Impact factor: 11.205

5.  Calibration and Uncertainty in Neural Time-to-Event Modeling.

Authors:  Paidamoyo Chapfuwa; Chenyang Tao; Chunyuan Li; Irfan Khan; Karen J Chandross; Michael J Pencina; Lawrence Carin; Ricardo Henao
Journal:  IEEE Trans Neural Netw Learn Syst       Date:  2020-10-29       Impact factor: 10.451

6.  Inferring spatial and signaling relationships between cells from single cell transcriptomic data.

Authors:  Zixuan Cang; Qing Nie
Journal:  Nat Commun       Date:  2020-04-29       Impact factor: 14.919

7.  Optimal Mass Transport with Lagrangian Workflow Reveals Advective and Diffusion Driven Solute Transport in the Glymphatic System.

Authors:  Sunil Koundal; Rena Elkin; Saad Nadeem; Yuechuan Xue; Stefan Constantinou; Simon Sanggaard; Xiaodan Liu; Brittany Monte; Feng Xu; William Van Nostrand; Maiken Nedergaard; Hedok Lee; Joanna Wardlaw; Helene Benveniste; Allen Tannenbaum
Journal:  Sci Rep       Date:  2020-02-06       Impact factor: 4.379

8.  A single-cell atlas of the mouse and human prostate reveals heterogeneity and conservation of epithelial progenitors.

Authors:  Laura Crowley; Francesco Cambuli; Luis Aparicio; Maho Shibata; Brian D Robinson; Shouhong Xuan; Weiping Li; Hanina Hibshoosh; Massimo Loda; Raul Rabadan; Michael M Shen
Journal:  Elife       Date:  2020-09-11       Impact factor: 8.140

9.  Dynamical machine learning volumetric reconstruction of objects' interiors from limited angular views.

Authors:  Iksung Kang; Alexandre Goy; George Barbastathis
Journal:  Light Sci Appl       Date:  2021-04-07       Impact factor: 17.782

10.  Assessment of Physical Fitness and Health Status of Athletes Based on Intelligent Medical Treatment under Machine Learning.

Authors:  Yunlong Tong
Journal:  Comput Intell Neurosci       Date:  2022-07-30
  10 in total

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