Literature DB >> 32955491

Cryogenic Sample Loading into a Magic Angle Spinning Nuclear Magnetic Resonance Spectrometer that Preserves Cellular Viability.

Rupam Ghosh1, Jaka Kragelj1, Yiling Xiao1, Kendra K Frederick2.   

Abstract

Dynamic nuclear polarization (DNP) can dramatically increase the sensitivity of magic angle spinning (MAS) nuclear magnetic resonance (NMR) spectroscopy. These sensitivity gains increase as temperatures decrease and are large enough to enable the study of molecules at very low concentrations at the operating temperatures (~100 K) of most commercial DNP-equipped NMR spectrometers. This leads to the possibility of in-cell structural biology on cryopreserved cells for macromolecules at their endogenous levels in their native environments. However, the freezing rates required for cellular cryopreservation are exceeded during typical sample handling for DNP MAS NMR and this results in loss of cellular integrity and viability. This article describes a detailed protocol for the preparation and cryogenic transfer of a frozen sample of mammalian cells into a MAS NMR spectrometer.

Entities:  

Mesh:

Year:  2020        PMID: 32955491      PMCID: PMC7797162          DOI: 10.3791/61733

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  22 in total

1.  Biomolecular DNP-Supported NMR Spectroscopy using Site-Directed Spin Labeling.

Authors:  Elwin A W van der Cruijsen; Eline J Koers; Claire Sauvée; Raymond E Hulse; Markus Weingarth; Olivier Ouari; Eduardo Perozo; Paul Tordo; Marc Baldus
Journal:  Chemistry       Date:  2015-09-07       Impact factor: 5.236

2.  Cryogenic solid state NMR studies of fibrils of the Alzheimer's disease amyloid-β peptide: perspectives for DNP.

Authors:  Juan-Miguel Lopez del Amo; Dennis Schneider; Antoine Loquet; Adam Lange; Bernd Reif
Journal:  J Biomol NMR       Date:  2013-06-22       Impact factor: 2.835

3.  Principles of cryopreservation.

Authors:  David E Pegg
Journal:  Methods Mol Biol       Date:  2015

4.  Observing an Antisense Drug Complex in Intact Human Cells by in-Cell NMR Spectroscopy.

Authors:  Judith Schlagnitweit; Sarah Friebe Sandoz; Aleksander Jaworski; Ileana Guzzetti; Fabien Aussenac; Rodrigo J Carbajo; Elisabetta Chiarparin; Andrew J Pell; Katja Petzold
Journal:  Chembiochem       Date:  2019-09-17       Impact factor: 3.164

5.  Targetable Tetrazine-Based Dynamic Nuclear Polarization Agents for Biological Systems.

Authors:  Byung Joon Lim; Bryce E Ackermann; Galia T Debelouchina
Journal:  Chembiochem       Date:  2020-01-21       Impact factor: 3.164

Review 6.  What can solid state NMR contribute to our understanding of protein folding?

Authors:  Kan-Nian Hu; Robert Tycko
Journal:  Biophys Chem       Date:  2010-05-23       Impact factor: 2.352

7.  A rapid freeze-quench setup for multi-frequency EPR spectroscopy of enzymatic reactions.

Authors:  Roberta Pievo; Brigitta Angerstein; Alistair J Fielding; Christian Koch; Ivo Feussner; Marina Bennati
Journal:  Chemphyschem       Date:  2013-11-08       Impact factor: 3.102

8.  Detection of the covalent intermediate of UDP-N-acetylglucosamine enolpyruvyl transferase by solution-state and time-resolved solid-state NMR spectroscopy.

Authors:  C Ramilo; R J Appleyard; C Wanke; F Krekel; N Amrhein; J N Evans
Journal:  Biochemistry       Date:  1994-12-20       Impact factor: 3.162

9.  Sensitivity-enhanced NMR reveals alterations in protein structure by cellular milieus.

Authors:  Kendra K Frederick; Vladimir K Michaelis; Björn Corzilius; Ta-Chung Ong; Angela C Jacavone; Robert G Griffin; Susan Lindquist
Journal:  Cell       Date:  2015-10-08       Impact factor: 41.582

10.  KINETICS OF WATER LOSS FROM CELLS AT SUBZERO TEMPERATURES AND THE LIKELIHOOD OF INTRACELLULAR FREEZING.

Authors:  P MAZUR
Journal:  J Gen Physiol       Date:  1963-11       Impact factor: 4.086

View more
  4 in total

1.  Stability of the nitroxide biradical AMUPol in intact and lysed mammalian cells.

Authors:  Rupam Ghosh; Rania Dumarieh; Yiling Xiao; Kendra K Frederick
Journal:  J Magn Reson       Date:  2022-01-31       Impact factor: 2.229

Review 2.  Solid-State NMR Investigations of Extracellular Matrixes and Cell Walls of Algae, Bacteria, Fungi, and Plants.

Authors:  Nader Ghassemi; Alexandre Poulhazan; Fabien Deligey; Frederic Mentink-Vigier; Isabelle Marcotte; Tuo Wang
Journal:  Chem Rev       Date:  2021-12-08       Impact factor: 72.087

3.  In-Cell Sensitivity-Enhanced NMR of Intact Viable Mammalian Cells.

Authors:  Rupam Ghosh; Yiling Xiao; Jaka Kragelj; Kendra K Frederick
Journal:  J Am Chem Soc       Date:  2021-11-01       Impact factor: 15.419

4.  In-Cell NMR of Intact Mammalian Cells Preserved with the Cryoprotectants DMSO and Glycerol Have Similar DNP Performance.

Authors:  Yiling Xiao; Rupam Ghosh; Kendra K Frederick
Journal:  Front Mol Biosci       Date:  2022-01-25
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.