Literature DB >> 32924031

Data Augmentation Based on Substituting Regional MRIs Volume Scores.

Tuo Leng1,2, Qingyu Zhao2, Chao Yang1, Zhufu Lu1, Ehsan Adeli2, Kilian M Pohl2,3.   

Abstract

Due to difficulties in collecting sufficient training data, recent advances in neural-network-based methods have not been fully explored in the analysis of brain Magnetic Resonance Imaging (MRI). A possible solution to the limited-data issue is to augment the training set with synthetically generated data. In this paper, we propose a data augmentation strategy based on regional feature substitution. We demonstrate the advantages of this strategy with respect to training a simple neural-network-based classifier in predicting when individual youth transition from no-to-low to medium-to-heavy alcohol drinkers solely based on their volumetric MRI measurements. Based on 20-fold cross-validation, we generate more than one million synthetic samples from less than 500 subjects for each training run. The classifier achieves an accuracy of 74.1% in correctly distinguishing non-drinkers from drinkers at baseline and a 43.2% weighted accuracy in predicting the transition over a three year period (5-group classification task). Both accuracy scores are significantly better than training the classifier on the original dataset.

Entities:  

Year:  2019        PMID: 32924031      PMCID: PMC7486010          DOI: 10.1007/978-3-030-33642-4_4

Source DB:  PubMed          Journal:  Large Scale Annot Biomed Data Export Label Synth Hardw Aware Learn Med Imaging Comput Assist Interv (2019)


  14 in total

Review 1.  Bayesian networks in neuroscience: a survey.

Authors:  Concha Bielza; Pedro Larrañaga
Journal:  Front Comput Neurosci       Date:  2014-10-16       Impact factor: 2.380

2.  Brain gray and white matter volume loss accelerates with aging in chronic alcoholics: a quantitative MRI study.

Authors:  A Pfefferbaum; K O Lim; R B Zipursky; D H Mathalon; M J Rosenbloom; B Lane; C N Ha; E V Sullivan
Journal:  Alcohol Clin Exp Res       Date:  1992-12       Impact factor: 3.455

Review 3.  The clinical use of structural MRI in Alzheimer disease.

Authors:  Giovanni B Frisoni; Nick C Fox; Clifford R Jack; Philip Scheltens; Paul M Thompson
Journal:  Nat Rev Neurol       Date:  2010-02       Impact factor: 42.937

4.  Differential Data Augmentation Techniques for Medical Imaging Classification Tasks.

Authors:  Zeshan Hussain; Francisco Gimenez; Darvin Yi; Daniel Rubin
Journal:  AMIA Annu Symp Proc       Date:  2018-04-16

5.  Chained regularization for identifying brain patterns specific to HIV infection.

Authors:  Ehsan Adeli; Dongjin Kwon; Qingyu Zhao; Adolf Pfefferbaum; Natalie M Zahr; Edith V Sullivan; Kilian M Pohl
Journal:  Neuroimage       Date:  2018-08-21       Impact factor: 6.556

6.  Convolutional Neural Networks for Medical Image Analysis: Full Training or Fine Tuning?

Authors:  Nima Tajbakhsh; Jae Y Shin; Suryakanth R Gurudu; R Todd Hurst; Christopher B Kendall; Michael B Gotway
Journal:  IEEE Trans Med Imaging       Date:  2016-03-07       Impact factor: 10.048

Review 7.  Deep Learning in Medical Image Analysis.

Authors:  Dinggang Shen; Guorong Wu; Heung-Il Suk
Journal:  Annu Rev Biomed Eng       Date:  2017-03-09       Impact factor: 9.590

8.  The National Consortium on Alcohol and NeuroDevelopment in Adolescence (NCANDA): A Multisite Study of Adolescent Development and Substance Use.

Authors:  Sandra A Brown; Ty Brumback; Kristin Tomlinson; Kevin Cummins; Wesley K Thompson; Bonnie J Nagel; Michael D De Bellis; Stephen R Hooper; Duncan B Clark; Tammy Chung; Brant P Hasler; Ian M Colrain; Fiona C Baker; Devin Prouty; Adolf Pfefferbaum; Edith V Sullivan; Kilian M Pohl; Torsten Rohlfing; B Nolan Nichols; Weiwei Chu; Susan F Tapert
Journal:  J Stud Alcohol Drugs       Date:  2015-11       Impact factor: 2.582

9.  On Pixel-Wise Explanations for Non-Linear Classifier Decisions by Layer-Wise Relevance Propagation.

Authors:  Sebastian Bach; Alexander Binder; Grégoire Montavon; Frederick Klauschen; Klaus-Robert Müller; Wojciech Samek
Journal:  PLoS One       Date:  2015-07-10       Impact factor: 3.240

10.  The autism brain imaging data exchange: towards a large-scale evaluation of the intrinsic brain architecture in autism.

Authors:  A Di Martino; C-G Yan; Q Li; E Denio; F X Castellanos; K Alaerts; J S Anderson; M Assaf; S Y Bookheimer; M Dapretto; B Deen; S Delmonte; I Dinstein; B Ertl-Wagner; D A Fair; L Gallagher; D P Kennedy; C L Keown; C Keysers; J E Lainhart; C Lord; B Luna; V Menon; N J Minshew; C S Monk; S Mueller; R-A Müller; M B Nebel; J T Nigg; K O'Hearn; K A Pelphrey; S J Peltier; J D Rudie; S Sunaert; M Thioux; J M Tyszka; L Q Uddin; J S Verhoeven; N Wenderoth; J L Wiggins; S H Mostofsky; M P Milham
Journal:  Mol Psychiatry       Date:  2013-06-18       Impact factor: 15.992

View more
  3 in total

1.  MIDeepSeg: Minimally interactive segmentation of unseen objects from medical images using deep learning.

Authors:  Xiangde Luo; Guotai Wang; Tao Song; Jingyang Zhang; Michael Aertsen; Jan Deprest; Sebastien Ourselin; Tom Vercauteren; Shaoting Zhang
Journal:  Med Image Anal       Date:  2021-05-18       Impact factor: 13.828

2.  Acne detection and severity evaluation with interpretable convolutional neural network models.

Authors:  Hao Wen; Wenjian Yu; Yuanqing Wu; Jun Zhao; Xiaolong Liu; Zhexiang Kuang; Rong Fan
Journal:  Technol Health Care       Date:  2022       Impact factor: 1.205

3.  Quantitative Measurement of Spinal Cerebrospinal Fluid by Cascade Artificial Intelligence Models in Patients with Spontaneous Intracranial Hypotension.

Authors:  Jachih Fu; Jyh-Wen Chai; Po-Lin Chen; Yu-Wen Ding; Hung-Chieh Chen
Journal:  Biomedicines       Date:  2022-08-22
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.