Literature DB >> 28301734

Deep Learning in Medical Image Analysis.

Dinggang Shen1,2, Guorong Wu1, Heung-Il Suk2.   

Abstract

This review covers computer-assisted analysis of images in the field of medical imaging. Recent advances in machine learning, especially with regard to deep learning, are helping to identify, classify, and quantify patterns in medical images. At the core of these advances is the ability to exploit hierarchical feature representations learned solely from data, instead of features designed by hand according to domain-specific knowledge. Deep learning is rapidly becoming the state of the art, leading to enhanced performance in various medical applications. We introduce the fundamentals of deep learning methods and review their successes in image registration, detection of anatomical and cellular structures, tissue segmentation, computer-aided disease diagnosis and prognosis, and so on. We conclude by discussing research issues and suggesting future directions for further improvement.

Entities:  

Keywords:  deep learning; medical image analysis; unsupervised feature learning

Mesh:

Year:  2017        PMID: 28301734      PMCID: PMC5479722          DOI: 10.1146/annurev-bioeng-071516-044442

Source DB:  PubMed          Journal:  Annu Rev Biomed Eng        ISSN: 1523-9829            Impact factor:   9.590


  66 in total

1.  Adaptive, template moderated, spatially varying statistical classification.

Authors:  S K Warfield; M Kaus; F A Jolesz; R Kikinis
Journal:  Med Image Anal       Date:  2000-03       Impact factor: 8.545

2.  Training products of experts by minimizing contrastive divergence.

Authors:  Geoffrey E Hinton
Journal:  Neural Comput       Date:  2002-08       Impact factor: 2.026

3.  The perceptron: a probabilistic model for information storage and organization in the brain.

Authors:  F ROSENBLATT
Journal:  Psychol Rev       Date:  1958-11       Impact factor: 8.934

4.  Automatic segmentation of MR images of the developing newborn brain.

Authors:  Marcel Prastawa; John H Gilmore; Weili Lin; Guido Gerig
Journal:  Med Image Anal       Date:  2005-10       Impact factor: 8.545

5.  A fast learning algorithm for deep belief nets.

Authors:  Geoffrey E Hinton; Simon Osindero; Yee-Whye Teh
Journal:  Neural Comput       Date:  2006-07       Impact factor: 2.026

6.  Reducing the dimensionality of data with neural networks.

Authors:  G E Hinton; R R Salakhutdinov
Journal:  Science       Date:  2006-07-28       Impact factor: 47.728

7.  Learning-based deformable registration of MR brain images.

Authors:  Guorong Wu; Feihu Qi; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2006-09       Impact factor: 10.048

8.  Diffeomorphic demons: efficient non-parametric image registration.

Authors:  Tom Vercauteren; Xavier Pennec; Aymeric Perchant; Nicholas Ayache
Journal:  Neuroimage       Date:  2008-11-07       Impact factor: 6.556

9.  Automatic segmentation of newborn brain MRI.

Authors:  Neil I Weisenfeld; Simon K Warfield
Journal:  Neuroimage       Date:  2009-05-03       Impact factor: 6.556

10.  Automatic segmentation and reconstruction of the cortex from neonatal MRI.

Authors:  Hui Xue; Latha Srinivasan; Shuzhou Jiang; Mary Rutherford; A David Edwards; Daniel Rueckert; Joseph V Hajnal
Journal:  Neuroimage       Date:  2007-08-07       Impact factor: 6.556

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  488 in total

1.  IMPROVING TUMOR CO-SEGMENTATION ON PET-CT IMAGES WITH 3D CO-MATTING.

Authors:  Zisha Zhong; Yusung Kim; Leixin Zhou; Kristin Plichta; Bryan Allen; John Buatti; Xiaodong Wu
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2018-05-24

2.  Zero-Echo-Time and Dixon Deep Pseudo-CT (ZeDD CT): Direct Generation of Pseudo-CT Images for Pelvic PET/MRI Attenuation Correction Using Deep Convolutional Neural Networks with Multiparametric MRI.

Authors:  Andrew P Leynes; Jaewon Yang; Florian Wiesinger; Sandeep S Kaushik; Dattesh D Shanbhag; Youngho Seo; Thomas A Hope; Peder E Z Larson
Journal:  J Nucl Med       Date:  2017-10-30       Impact factor: 10.057

Review 3.  Deep learning-based digital subtraction angiography image generation.

Authors:  Yufeng Gao; Yu Song; Xiangrui Yin; Weiwen Wu; Lu Zhang; Yang Chen; Wanyin Shi
Journal:  Int J Comput Assist Radiol Surg       Date:  2019-07-31       Impact factor: 2.924

4.  Dynamic Routing Capsule Networks for Mild Cognitive Impairment Diagnosis.

Authors:  Zhicheng Jiao; Pu Huang; Tae-Eui Kam; Li-Ming Hsu; Ye Wu; Han Zhang; Dinggang Shen
Journal:  Med Image Comput Comput Assist Interv       Date:  2019-10-10

5.  Deep Learning for Prediction of Obstructive Disease From Fast Myocardial Perfusion SPECT: A Multicenter Study.

Authors:  Julian Betancur; Frederic Commandeur; Mahsaw Motlagh; Tali Sharir; Andrew J Einstein; Sabahat Bokhari; Mathews B Fish; Terrence D Ruddy; Philipp Kaufmann; Albert J Sinusas; Edward J Miller; Timothy M Bateman; Sharmila Dorbala; Marcelo Di Carli; Guido Germano; Yuka Otaki; Balaji K Tamarappoo; Damini Dey; Daniel S Berman; Piotr J Slomka
Journal:  JACC Cardiovasc Imaging       Date:  2018-03-14

6.  Curved planar reformatting and convolutional neural network-based segmentation of the small bowel for visualization and quantitative assessment of pediatric Crohn's disease from MRI.

Authors:  Yechiel Lamash; Sila Kurugol; Moti Freiman; Jeannette M Perez-Rossello; Michael J Callahan; Athos Bousvaros; Simon K Warfield
Journal:  J Magn Reson Imaging       Date:  2018-10-24       Impact factor: 4.813

7.  Automated high content image analysis of dendritic arborization in primary mouse hippocampal and rat cortical neurons in culture.

Authors:  Martin R Schmuck; Kimberly P Keil; Sunjay Sethi; Rhianna K Morgan; Pamela J Lein
Journal:  J Neurosci Methods       Date:  2020-05-24       Impact factor: 2.390

8.  Multi-Channel 3D Deep Feature Learning for Survival Time Prediction of Brain Tumor Patients Using Multi-Modal Neuroimages.

Authors:  Dong Nie; Junfeng Lu; Han Zhang; Ehsan Adeli; Jun Wang; Zhengda Yu; LuYan Liu; Qian Wang; Jinsong Wu; Dinggang Shen
Journal:  Sci Rep       Date:  2019-01-31       Impact factor: 4.379

9.  Semi-Automated Extraction of Crohns Disease MR Imaging Markers using a 3D Residual CNN with Distance Prior.

Authors:  Yechiel Lamash; Sila Kurugol; Simon K Warfield
Journal:  Deep Learn Med Image Anal Multimodal Learn Clin Decis Support (2018)       Date:  2018-09-20

10.  4D-CT deformable image registration using multiscale unsupervised deep learning.

Authors:  Yang Lei; Yabo Fu; Tonghe Wang; Yingzi Liu; Pretesh Patel; Walter J Curran; Tian Liu; Xiaofeng Yang
Journal:  Phys Med Biol       Date:  2020-04-20       Impact factor: 3.609

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