Literature DB >> 32895498

Optogenetic control of the lac operon for bacterial chemical and protein production.

Samantha S Ip1, César Carrasco-López1, Makoto A Lalwani1, Catherine Day2, Evan M Zhao1, Hinako Kawabe1, José L Avalos3,4,5.   

Abstract

Control of the lac operon with isopropyl β-D-1-thiogalactopyranoside (IPTG) has been used to regulate gene expression in Escherichia coli for countless applications, including metabolic engineering and recombinant protein production. However, optogenetics offers unique capabilities, such as easy tunability, reversibility, dynamic induction strength and spatial control, that are difficult to obtain with chemical inducers. We have developed a series of circuits for optogenetic regulation of the lac operon, which we call OptoLAC, to control gene expression from various IPTG-inducible promoters using only blue light. Applying them to metabolic engineering improves mevalonate and isobutanol production by 24% and 27% respectively, compared to IPTG induction, in light-controlled fermentations scalable to at least two-litre bioreactors. Furthermore, OptoLAC circuits enable control of recombinant protein production, reaching yields comparable to IPTG induction but with easier tunability of expression. OptoLAC circuits are potentially useful to confer light control over other cell functions originally designed to be IPTG-inducible.

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Year:  2020        PMID: 32895498     DOI: 10.1038/s41589-020-0639-1

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  52 in total

1.  Genetic regulatory mechanisms in the synthesis of proteins.

Authors:  F JACOB; J MONOD
Journal:  J Mol Biol       Date:  1961-06       Impact factor: 5.469

2.  From dusk till dawn: one-plasmid systems for light-regulated gene expression.

Authors:  Robert Ohlendorf; Roee R Vidavski; Avigdor Eldar; Keith Moffat; Andreas Möglich
Journal:  J Mol Biol       Date:  2012-01-08       Impact factor: 5.469

Review 3.  Scaling up of renewable chemicals.

Authors:  Karl Sanford; Gopal Chotani; Nathan Danielson; James A Zahn
Journal:  Curr Opin Biotechnol       Date:  2016-02-10       Impact factor: 9.740

4.  Multichromatic control of gene expression in Escherichia coli.

Authors:  Jeffrey J Tabor; Anselm Levskaya; Christopher A Voigt
Journal:  J Mol Biol       Date:  2010-10-28       Impact factor: 5.469

5.  Synthetic biology: engineering Escherichia coli to see light.

Authors:  Anselm Levskaya; Aaron A Chevalier; Jeffrey J Tabor; Zachary Booth Simpson; Laura A Lavery; Matthew Levy; Eric A Davidson; Alexander Scouras; Andrew D Ellington; Edward M Marcotte; Christopher A Voigt
Journal:  Nature       Date:  2005-11-24       Impact factor: 49.962

Review 6.  Review: optimizing inducer and culture conditions for expression of foreign proteins under the control of the lac promoter.

Authors:  R S Donovan; C W Robinson; B R Glick
Journal:  J Ind Microbiol       Date:  1996-03

Review 7.  Current and future modalities of dynamic control in metabolic engineering.

Authors:  Makoto A Lalwani; Evan M Zhao; José L Avalos
Journal:  Curr Opin Biotechnol       Date:  2018-03-22       Impact factor: 9.740

Review 8.  Escherichia coli as a host for metabolic engineering.

Authors:  Sammy Pontrelli; Tsan-Yu Chiu; Ethan I Lan; Frederic Y-H Chen; Peiching Chang; James C Liao
Journal:  Metab Eng       Date:  2018-04-22       Impact factor: 9.783

Review 9.  Development of a commercial scale process for production of 1,4-butanediol from sugar.

Authors:  Anthony Burgard; Mark J Burk; Robin Osterhout; Stephen Van Dien; Harry Yim
Journal:  Curr Opin Biotechnol       Date:  2016-04-28       Impact factor: 9.740

10.  Optogenetic regulation of engineered cellular metabolism for microbial chemical production.

Authors:  Evan M Zhao; Yanfei Zhang; Justin Mehl; Helen Park; Makoto A Lalwani; Jared E Toettcher; José L Avalos
Journal:  Nature       Date:  2018-03-21       Impact factor: 49.962

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  14 in total

Review 1.  Biosensor-enabled pathway optimization in metabolic engineering.

Authors:  Yuxi Teng; Jianli Zhang; Tian Jiang; Yusong Zou; Xinyu Gong; Yajun Yan
Journal:  Curr Opin Biotechnol       Date:  2022-02-11       Impact factor: 10.279

Review 2.  Optogenetic approaches in biotechnology and biomaterials.

Authors:  Vasily V Reshetnikov; Sviatlana V Smolskaya; Sofia G Feoktistova; Vladislav V Verkhusha
Journal:  Trends Biotechnol       Date:  2022-01-11       Impact factor: 21.942

3.  Optogenetic Amplification Circuits for Light-Induced Metabolic Control.

Authors:  Evan M Zhao; Makoto A Lalwani; Jhong-Min Chen; Paulina Orillac; Jared E Toettcher; José L Avalos
Journal:  ACS Synth Biol       Date:  2021-04-09       Impact factor: 5.110

4.  Engineering AraC to make it responsive to light instead of arabinose.

Authors:  Edoardo Romano; Armin Baumschlager; Emir Bora Akmeriç; Navaneethan Palanisamy; Moustafa Houmani; Gregor Schmidt; Mehmet Ali Öztürk; Leonard Ernst; Mustafa Khammash; Barbara Di Ventura
Journal:  Nat Chem Biol       Date:  2021-04-26       Impact factor: 15.040

5.  Reversible thermal regulation for bifunctional dynamic control of gene expression in Escherichia coli.

Authors:  Xuan Wang; Jia-Ning Han; Xu Zhang; Yue-Yuan Ma; Yina Lin; Huan Wang; Dian-Jie Li; Tao-Ran Zheng; Fu-Qing Wu; Jian-Wen Ye; Guo-Qiang Chen
Journal:  Nat Commun       Date:  2021-03-03       Impact factor: 14.919

6.  Light-induced production of isobutanol and 3-methyl-1-butanol by metabolically engineered cyanobacteria.

Authors:  Shunichi Kobayashi; Shota Atsumi; Kazunori Ikebukuro; Koji Sode; Ryutaro Asano
Journal:  Microb Cell Fact       Date:  2022-01-06       Impact factor: 5.328

Review 7.  Toward Multiplexed Optogenetic Circuits.

Authors:  Ari Dwijayanti; Congqiang Zhang; Chueh Loo Poh; Thomas Lautier
Journal:  Front Bioeng Biotechnol       Date:  2022-01-05

Review 8.  Optogenetics in bacteria - applications and opportunities.

Authors:  Florian Lindner; Andreas Diepold
Journal:  FEMS Microbiol Rev       Date:  2022-03-03       Impact factor: 16.408

9.  Bifunctional optogenetic switch for improving shikimic acid production in E. coli.

Authors:  Irene Komera; Cong Gao; Liang Guo; Guipeng Hu; Xiulai Chen; Liming Liu
Journal:  Biotechnol Biofuels Bioprod       Date:  2022-02-07

Review 10.  Microbial Biocontainment Systems for Clinical, Agricultural, and Industrial Applications.

Authors:  Aaron Pantoja Angles; Alexander U Valle-Pérez; Charlotte Hauser; Magdy M Mahfouz
Journal:  Front Bioeng Biotechnol       Date:  2022-02-02
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