Literature DB >> 32852843

The crystal structure of AbsH3: A putative flavin adenine dinucleotide-dependent reductase in the abyssomicin biosynthesis pathway.

Jonathan A Clinger1, Xiachang Wang2,3, Wenlong Cai4, Yanyan Zhu3,4, Mitchell D Miller1, Chang-Guo Zhan3,4, Steven G Van Lanen4, Jon S Thorson3,4, George N Phillips1,5.   

Abstract

Natural products and natural product-derived compounds have been widely used for pharmaceuticals for many years, and the search for new natural products that may have interesting activity is ongoing. Abyssomicins are natural product molecules that have antibiotic activity via inhibition of the folate synthesis pathway in microbiota. These compounds also appear to undergo a required [4 + 2] cycloaddition in their biosynthetic pathway. Here we report the structure of an flavin adenine dinucleotide-dependent reductase, AbsH3, from the biosynthetic gene cluster of novel abyssomicins found in Streptomyces sp. LC-6-2.
© 2020 Wiley Periodicals LLC.

Entities:  

Keywords:  X-ray crystallography; antibiotics; ice rings; natural product; oxidoreductase

Mesh:

Substances:

Year:  2020        PMID: 32852843      PMCID: PMC7910320          DOI: 10.1002/prot.25994

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  35 in total

1.  Abyssomicins G and H and atrop-abyssomicin C from the marine Verrucosispora strain AB-18-032.

Authors:  Simone Keller; Graeme Nicholson; Carmen Drahl; Erik Sorensen; Hans-Peter Fiedler; Roderich D Süssmuth
Journal:  J Antibiot (Tokyo)       Date:  2007-06       Impact factor: 2.649

2.  Abyssomicin 2 reactivates latent HIV-1 by a PKC- and HDAC-independent mechanism.

Authors:  Brian León; Gabriel Navarro; Bailey J Dickey; George Stepan; Angela Tsai; Gregg S Jones; Monica E Morales; Tiffany Barnes; Shekeba Ahmadyar; Manuel Tsiang; Romas Geleziunas; Tomas Cihlar; Nikos Pagratis; Yang Tian; Helen Yu; Roger G Linington
Journal:  Org Lett       Date:  2015-01-05       Impact factor: 6.005

3.  The Catalytic Mechanism of a Natural Diels-Alderase Revealed in Molecular Detail.

Authors:  Matthew J Byrne; Nicholas R Lees; Li-Chen Han; Marc W van der Kamp; Adrian J Mulholland; James E M Stach; Christine L Willis; Paul R Race
Journal:  J Am Chem Soc       Date:  2016-05-06       Impact factor: 15.419

4.  Bi- and Tetracyclic Spirotetronates from the Coal Mine Fire Isolate Streptomyces sp. LC-6-2.

Authors:  Xiachang Wang; Sherif I Elshahawi; Wenlong Cai; Yinan Zhang; Larissa V Ponomareva; Xiabin Chen; Gregory C Copley; James C Hower; Chang-Guo Zhan; Sean Parkin; Jürgen Rohr; Steven G Van Lanen; Khaled A Shaaban; Jon S Thorson
Journal:  J Nat Prod       Date:  2017-03-30       Impact factor: 4.050

5.  Three-in-One Oxygen Vacancies: Whole Visible-Spectrum Absorption, Efficient Charge Separation, and Surface Site Activation for Robust CO2 Photoreduction.

Authors:  Hongjian Yu; Jieyuan Li; Yihe Zhang; Songqiu Yang; Keli Han; Fan Dong; Tianyi Ma; Hongwei Huang
Journal:  Angew Chem Int Ed Engl       Date:  2019-01-29       Impact factor: 15.336

6.  PHENIX: a comprehensive Python-based system for macromolecular structure solution.

Authors:  Paul D Adams; Pavel V Afonine; Gábor Bunkóczi; Vincent B Chen; Ian W Davis; Nathaniel Echols; Jeffrey J Headd; Li-Wei Hung; Gary J Kapral; Ralf W Grosse-Kunstleve; Airlie J McCoy; Nigel W Moriarty; Robert Oeffner; Randy J Read; David C Richardson; Jane S Richardson; Thomas C Terwilliger; Peter H Zwart
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

7.  Enzymatic Synthesis of the Ribosylated Glycyl-Uridine Disaccharide Core of Peptidyl Nucleoside Antibiotics.

Authors:  Zheng Cui; Xiaodong Liu; Jonathan Overbay; Wenlong Cai; Xiachang Wang; Anke Lemke; Daniel Wiegmann; Giuliana Niro; Jon S Thorson; Christian Ducho; Steven G Van Lanen
Journal:  J Org Chem       Date:  2018-05-24       Impact factor: 4.354

8.  Pyrroindomycins, novel antibiotics produced by Streptomyces rugosporus sp. LL-42D005. I. Isolation and structure determination.

Authors:  W Ding; D R Williams; P Northcote; M M Siegel; R Tsao; J Ashcroft; G O Morton; M Alluri; D Abbanat; W M Maiese
Journal:  J Antibiot (Tokyo)       Date:  1994-11       Impact factor: 2.649

Review 9.  Spirotetronate polyketides as leads in drug discovery.

Authors:  Michelle H Lacoske; Emmanuel A Theodorakis
Journal:  J Nat Prod       Date:  2014-12-01       Impact factor: 4.050

10.  Abyssomicins from the South China Sea deep-sea sediment Verrucosispora sp.: natural thioether Michael addition adducts as antitubercular prodrugs.

Authors:  Qian Wang; Fuhang Song; Xue Xiao; Pei Huang; Li Li; Aaron Monte; Wael M Abdel-Mageed; Jian Wang; Hui Guo; Wenni He; Feng Xie; Huanqin Dai; Miaomiao Liu; Caixia Chen; Hao Xu; Mei Liu; Andrew M Piggott; Xueting Liu; Robert J Capon; Lixin Zhang
Journal:  Angew Chem Int Ed Engl       Date:  2012-12-06       Impact factor: 15.336

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