Literature DB >> 32830874

Prospective Deployment of Deep Learning in MRI: A Framework for Important Considerations, Challenges, and Recommendations for Best Practices.

Akshay S Chaudhari1, Christopher M Sandino1,2, Elizabeth K Cole1,2, David B Larson1, Garry E Gold1,3,4, Shreyas S Vasanawala1, Matthew P Lungren1, Brian A Hargreaves1,2,5, Curtis P Langlotz1,5.   

Abstract

Artificial intelligence algorithms based on principles of deep learning (DL) have made a large impact on the acquisition, reconstruction, and interpretation of MRI data. Despite the large number of retrospective studies using DL, there are fewer applications of DL in the clinic on a routine basis. To address this large translational gap, we review the recent publications to determine three major use cases that DL can have in MRI, namely, that of model-free image synthesis, model-based image reconstruction, and image or pixel-level classification. For each of these three areas, we provide a framework for important considerations that consist of appropriate model training paradigms, evaluation of model robustness, downstream clinical utility, opportunities for future advances, as well recommendations for best current practices. We draw inspiration for this framework from advances in computer vision in natural imaging as well as additional healthcare fields. We further emphasize the need for reproducibility of research studies through the sharing of datasets and software. LEVEL OF EVIDENCE: 5 TECHNICAL EFFICACY STAGE: 2.
© 2020 International Society for Magnetic Resonance in Medicine.

Entities:  

Keywords:  MRI reconstruction; artificial intelligence; classification; convolutional neural networks; deep learning; segmentation

Mesh:

Year:  2020        PMID: 32830874      PMCID: PMC8639049          DOI: 10.1002/jmri.27331

Source DB:  PubMed          Journal:  J Magn Reson Imaging        ISSN: 1053-1807            Impact factor:   5.119


  65 in total

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2.  A Transfer-Learning Approach for Accelerated MRI Using Deep Neural Networks.

Authors:  Salman Ul Hassan Dar; Muzaffer Özbey; Ahmet Burak Çatlı; Tolga Çukur
Journal:  Magn Reson Med       Date:  2020-01-03       Impact factor: 4.668

3.  Norm-Preservation: Why Residual Networks Can Become Extremely Deep?

Authors:  Alireza Zaeemzadeh; Nazanin Rahnavard; Mubarak Shah
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2020-04-27       Impact factor: 6.226

4.  Advancing machine learning for MR image reconstruction with an open competition: Overview of the 2019 fastMRI challenge.

Authors:  Florian Knoll; Tullie Murrell; Anuroop Sriram; Nafissa Yakubova; Jure Zbontar; Michael Rabbat; Aaron Defazio; Matthew J Muckley; Daniel K Sodickson; C Lawrence Zitnick; Michael P Recht
Journal:  Magn Reson Med       Date:  2020-06-07       Impact factor: 4.668

5.  The efficacy of using computer-aided detection (CAD) for detection of breast cancer in mammography screening: a systematic review.

Authors:  Emilie L Henriksen; Jonathan F Carlsen; Ilse Mm Vejborg; Michael B Nielsen; Carsten A Lauridsen
Journal:  Acta Radiol       Date:  2018-04-17       Impact factor: 1.990

6.  Learning a variational network for reconstruction of accelerated MRI data.

Authors:  Kerstin Hammernik; Teresa Klatzer; Erich Kobler; Michael P Recht; Daniel K Sodickson; Thomas Pock; Florian Knoll
Journal:  Magn Reson Med       Date:  2017-11-08       Impact factor: 4.668

7.  Attention-Aware Discrimination for MR-to-CT Image Translation Using Cycle-Consistent Generative Adversarial Networks.

Authors:  Vasant Kearney; Benjamin P Ziemer; Alan Perry; Tianqi Wang; Jason W Chan; Lijun Ma; Olivier Morin; Sue S Yom; Timothy D Solberg
Journal:  Radiol Artif Intell       Date:  2020-03-25

8.  Clinical evaluation of fully automated thigh muscle and adipose tissue segmentation using a U-Net deep learning architecture in context of osteoarthritic knee pain.

Authors:  Jana Kemnitz; Christian F Baumgartner; Felix Eckstein; Akshay Chaudhari; Anja Ruhdorfer; Wolfgang Wirth; Sebastian K Eder; Ender Konukoglu
Journal:  MAGMA       Date:  2019-12-23       Impact factor: 2.310

9.  Handling missing MRI sequences in deep learning segmentation of brain metastases: a multicenter study.

Authors:  Endre Grøvik; Darvin Yi; Michael Iv; Elizabeth Tong; Line Brennhaug Nilsen; Anna Latysheva; Cathrine Saxhaug; Kari Dolven Jacobsen; Åslaug Helland; Kyrre Eeg Emblem; Daniel L Rubin; Greg Zaharchuk
Journal:  NPJ Digit Med       Date:  2021-02-22

Review 10.  Rapid Knee MRI Acquisition and Analysis Techniques for Imaging Osteoarthritis.

Authors:  Akshay S Chaudhari; Feliks Kogan; Valentina Pedoia; Sharmila Majumdar; Garry E Gold; Brian A Hargreaves
Journal:  J Magn Reson Imaging       Date:  2019-11-21       Impact factor: 4.813

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  5 in total

1.  Introduction to Deep Learning in Clinical Neuroscience.

Authors:  Eddie de Dios; Muhaddisa Barat Ali; Irene Yu-Hua Gu; Tomás Gomez Vecchio; Chenjie Ge; Asgeir S Jakola
Journal:  Acta Neurochir Suppl       Date:  2022

2.  Towards autonomous analysis of chemical exchange saturation transfer experiments using deep neural networks.

Authors:  Gogulan Karunanithy; Tairan Yuwen; Lewis E Kay; D Flemming Hansen
Journal:  J Biomol NMR       Date:  2022-05-27       Impact factor: 2.582

Review 3.  Identification of Tumor-Specific MRI Biomarkers Using Machine Learning (ML).

Authors:  Rima Hajjo; Dima A Sabbah; Sanaa K Bardaweel; Alexander Tropsha
Journal:  Diagnostics (Basel)       Date:  2021-04-21

4.  The International Workshop on Osteoarthritis Imaging Knee MRI Segmentation Challenge: A Multi-Institute Evaluation and Analysis Framework on a Standardized Dataset.

Authors:  Arjun D Desai; Francesco Caliva; Claudia Iriondo; Aliasghar Mortazi; Sachin Jambawalikar; Ulas Bagci; Mathias Perslev; Christian Igel; Erik B Dam; Sibaji Gaj; Mingrui Yang; Xiaojuan Li; Cem M Deniz; Vladimir Juras; Ravinder Regatte; Garry E Gold; Brian A Hargreaves; Valentina Pedoia; Akshay S Chaudhari
Journal:  Radiol Artif Intell       Date:  2021-02-10

5.  Diagnostic Accuracy of Quantitative Multicontrast 5-Minute Knee MRI Using Prospective Artificial Intelligence Image Quality Enhancement.

Authors:  Akshay S Chaudhari; Murray J Grissom; Zhongnan Fang; Bragi Sveinsson; Jin Hyung Lee; Garry E Gold; Brian A Hargreaves; Kathryn J Stevens
Journal:  AJR Am J Roentgenol       Date:  2020-08-05       Impact factor: 3.959

  5 in total

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