| Literature DB >> 32805626 |
Shuai Yuan1, Paul Carter2, Maria Bruzelius3, Mathew Vithayathil4, Siddhartha Kar5, Amy M Mason6, Ang Lin7, Stephen Burgess8, Susanna C Larsson9.
Abstract
BACKGROUND: Tumour necrosis factor (TNF) inhibitors are used in the treatment of certain autoimmune diseases but given the role of TNF in tumour biology and atherosclerosis, such therapies may influence the risk of cancer and cardiovascular disease. We conducted a Mendelian randomization study to explore whether TNF levels are causally related to cardiovascular disease and cancer.Entities:
Keywords: Cancer; Cardiovascular disease; Tumour necrosis factor
Mesh:
Substances:
Year: 2020 PMID: 32805626 PMCID: PMC7452586 DOI: 10.1016/j.ebiom.2020.102956
Source DB: PubMed Journal: EBioMedicine ISSN: 2352-3964 Impact factor: 8.143
Detailed information of instrumental variables for TNF levels.
| rsID | Chr | Position (hg19) | Nearby gene | EA | NEA | EAF | Beta | SE | P | Included in main analysis |
| rs2857602 | 6 | 31,533,378 | G | A | 0.38 | 0.032 | 0.006 | 3.30 × 10−12 | No | |
| rs10744774 | 12 | 112,090,022 | A | C | 0.83 | 0.044 | 0.007 | 6.94 × 10−11 | Yes | |
| rs3184504 | 12 | 111,884,608 | T | C | 0.48 | 0.030 | 0.005 | 3.96 × 10−10 | Yes | |
| rs7182229 | 15 | 58,765,183 | T | G | 0.11 | 0.050 | 0.009 | 1.07 × 10−9 | Yes |
Chr indicates chromosome; EA; effect allele; EAF, effect allele frequency; NEA, non-effect allele; SE, standard error; TNF, tumour necrosis factor. Rs2857602 was not included in the main analysis since the TNF-increasing allele was associated with lower odds of rheumatoid arthritis and inflammatory bowel disease.
Characteristics of included studies or consortia of inflammatory diseases, cardiovascular diseases, and cancers.
| Outcome | Source | Cases | Controls | Sample size | Population |
| Rheumatoid arthritis | GARNET consortium | 29 880 | 73 758 | 103 638 | Mix |
| Inflammatory bowel disease | UK IBD consortium | 25 042 | 34 915 | 59 957 | European |
| Cerebrovascular disease | |||||
| Overall stroke | MEGASTROKE consortium | 67 162 | 454 450 | 521 612 | Mix |
| Overall stroke | UKBB | 9652 | 357 991 | 367 643 | European |
| Any ischaemic stroke | MEGASTROKE consortium | 60 341 | NA | NA | Mix |
| Any ischaemic stroke | UKBB | 3554 | 364 089 | 367 643 | European |
| Large artery stroke | MEGASTROKE consortium | 6688 | 146 392 | 153 080 | Mix |
| Small vessel stroke | MEGASTROKE consortium | 11 710 | 192 662 | 204 372 | Mix |
| Cardioembolic stroke | MEGASTROKE consortium | 9006 | 204 570 | 213 576 | Mix |
| Intracerebral haemorrhage | UKBB | 1064 | 366 579 | 367 643 | European |
| Subarachnoid haemorrhage | UKBB | 1084 | 366 559 | 367 643 | European |
| Heart and valvular disease | |||||
| Coronary artery disease | CARDIoGRAMplusC4D consortium | 60 801 | 123 504 | 184 305 | Mix |
| Coronary artery disease | UKBB | 24 531 | 343 112 | 367 643 | European |
| Heart failure | UKBB | 7382 | 387 652 | 395 034 | European |
| Atrial fibrillation | AFGen | 65 446 | 522 000 | 587 446 | Mix |
| Atrial fibrillation | UKBB | 16 945 | 350 698 | 367 643 | European |
| Abdominal aortic aneurysm | UKBB | 1094 | 366 549 | 367 643 | European |
| Aortic valve stenosis | UKBB | 2244 | 365 399 | 367 643 | European |
| Vessel disease | |||||
| Peripheral artery disease | UKBB | 3415 | 364 228 | 367 643 | European |
| Venous thromboembolism | UKBB | 15 602 | 352 041 | 367 643 | European |
| Bladder cancer | UKBB | 2588 | 365 055 | 367 643 | European |
| Breast cancer | BCAC | 122 977 | 105 974 | 228 951 | Mix |
| Breast cancer ER- | BCAC | 21 468 | NA | NA | Mix |
| Breast cancer ER+ | BCAC | 69 501 | NA | NA | Mix |
| Breast cancer | UKBB | 13 666 | 353 977 | 198 838 | European |
| Cervical cancer | UKBB | 1928 | 365 715 | 198 838 | European |
| Colorectal cancer | UKBB | 5486 | 362 157 | 367 643 | European |
| Endometrial cancer | UKBB | 1520 | 366 123 | 198 838 | European |
| Head-neck cancer | UKBB | 1615 | 366 028 | 367 643 | European |
| Kidney cancer | UKBB | 1310 | 366 333 | 367 643 | European |
| Leukaemia | UKBB | 1403 | 366 240 | 367 643 | European |
| Lung cancer | ILCCO | 11 348 | 15,861 | 27 209 | European |
| Melanoma | UKBB | 4869 | 362 774 | 367 643 | European |
| Non-Hodgkin's lymphoma | UKBB | 2296 | 365 347 | 367 643 | European |
| Ovarian cancer | UKBB | 1520 | 366 123 | 198 838 | European |
| Ovarian cancer | OCAC | 22 406 | 40 941 | 63 347 | Mix |
| Overall cancer | UKBB | 75 037 | 292 606 | 367 643 | European |
| Pancreatic cancer | UKBB | 1264 | 366 379 | 367 643 | European |
| Prostate cancer | PRACTICAL | 79 194 | 61 112 | 140 306 | European |
| Prostate cancer | UKBB | 7872 | 359 771 | 168 748 | European |
AFGen indicates Atrial Fibrillation Consortium; BCAC, Breast Cancer Association Consortium; CARDIoGRAMplusC4D, Coronary ARtery DIsease Genome wide Replication and Meta-analysis plus The Coronary Artery Disease Genetics; GARNET, Genetics and Allied research in Rheumatic diseases Networking; ILCCO, The International Lung Cancer Consortium; NA, not available; OCAC, The Ovarian Cancer Association Consortium; PRACTICAL, The Prostate Cancer Association Group to Investigate Cancer Associated Alterations in the Genome consortium; UKBB, UK Biobank; UK IBD consortium, UK Inflammatory Bowel Disease Genetics Consortium.
Includes Crohn's disease and ulcerative colitis.
Fig. 1Overview of this MR study, including genetic instrument and data sources used, results, and conclusions. AFGen indicates Atrial Fibrillation Consortium; BCAC, Breast Cancer Association Consortium; Ca, cancer; CAD, coronary artery disease; CARDIoGRAMplusC4D, Coronary ARtery DIsease Genome wide Replication and Meta-analysis plus The Coronary Artery Disease Genetics; IBD, inflammatory bowel disease; ILCCO, International Lung Cancer Consortium; GWAS, genome-wide association study; MR, Mendelian randomization; OCAC, The Ovarian Cancer Association Consortium; PRACTICAL, Prostate Cancer Association Group to Investigate Cancer Associated Alterations in the Genome consortium; RA, rheumatoid arthritis; SNPs, single-nucleotide polymorphisms; TNF, tumour necrosis factor; VTE, venous thromboembolism.
Fig. 2Associations of genetically higher TNF levels with cardiovascular diseases and cancers. AFGen indicates Atrial Fibrillation Consortium; BCAC, Breast Cancer Association Consortium; CARDIoGRAMplusC4D, Coronary ARtery DIsease Genome wide Replication and Meta-analysis plus The Coronary Artery Disease Genetics; CI, confidence interval; ILCCO, International Lung Cancer Consortium; NA, not available; OCAC, The Ovarian Cancer Association Consortium; OR, odds ratio; PRACTICAL, Prostate Cancer Association Group to Investigate Cancer Associated Alterations in the Genome consortium; TNF, tumour necrosis factor; UKBB, UK Biobank.