| Literature DB >> 32797641 |
Reza Soleimani1, Mehdi Khourssaji1, Damien Gruson1,2, Hector Rodriguez-Villalobos1,3, Mathilde Berghmans4, Leila Belkhir4, Jean-Cyr Yombi4, Benoît Kabamba-Mukadi1,3.
Abstract
Since December 2019, we have been in the battlefield with a new threat to the humanity, known as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), which causes coronavirus disease 2019 (COVID-19), characterized by viral pneumonia. It may be asymptomatic or cause various symptoms, ranging from flu-like symptoms to acute respiratory distress syndrome and eventually death. At present, the only reliable test for COVID-19 diagnosis is quantitative reverse transcriptase-polymerase chain reaction. Assessing the immune response against SARS-CoV-2 could increase the detection sensitivity of infected population. Hereby, we report the performances of a fully automated chemiluminescent immunoassay (CLIA) on 276 serum samples. One hundred samples obtained from COVID-19 negative subjects (COVID-19 free) were analyzed to evaluate the diagnostic specificity of antibody (Ab) detection. Thereafter, 176 samples obtained from 125 patients with confirmed COVID-19 (COVID-19 patients) were selected to assess the diagnostic sensitivity of the CLIA. All samples were analyzed on MAGLUMI 800 platform. All COVID-19 free samples had Ab levels below the cutoff values. Hence, the diagnostic specificity was estimated at 100% (95% confidence interval [CI] = 96.3-100.0; positive predictive value = 100%). By the 18th day from the onset of symptoms, we reached an optimal diagnostic sensitivity (more than 95.0%) In fact, the diagnostic sensitivity increased over time and between 15 and 25 days after symptoms onset, reached 95.5% (95% CI = 84.9-99.2). The new automated CLIA analyzer appeared to be a robust and reliable method to measure specific Ab against COVID-19 at high throughput. Our data suggest that combining Ab and nucleic acid detection could increase diagnostic sensitivity.Entities:
Keywords: COVID-19; Euroimmun; MAGLUMI; SARS-CoV-2; immunoassay; serology
Mesh:
Substances:
Year: 2020 PMID: 32797641 PMCID: PMC7436871 DOI: 10.1002/jmv.26430
Source DB: PubMed Journal: J Med Virol ISSN: 0146-6615 Impact factor: 20.693
Associations and discrepancies according to the diagnosis criteria (positive RT‐qPCR and suggestive chest CT scan and/or X‐ray) used for including positive COVID‐19 patients, their laboratory results, clinical information, and treatments
| COVID‐19 patients (n = 125; F = 58) | Deceased (n = 17; F = 9) | Remained at hospital by 30 April 2020 (n = 7; F = 0) | Recovered patients (n = 101; F = 49) |
|---|---|---|---|
| Demographics | |||
| Mean age (95% CI) | Male = 79.0 (67.9‐90.1); female = 84.9 (75.3‐94.5); overall = 82.1 (75.5‐88.7) | Male and overall = 62.6 (55.1‐70.0); female = NA | Male = 61.2 (57.5‐64.9); female = 64.0 (58.9‐69.0); overall = 62.5 (59.5‐65.9) |
| Male = 63.5 (60.1‐66.8) | |||
| Female = 67.2 (62.4‐72.1) | |||
| Overall = 65.2 (62.3‐68.1) y | |||
| 18‐39 y (F) | 0 (0) | 0 (0) | 3 (5) |
| 40‐59 y (F) | 1 (0) | 3 (0) | 22 (15) |
| 60‐79 y (F) | 4 (3) | 4 (0) | 23 (17) |
| ≥80 y (F) | 3 (6) | 0 (0) | 4 (12) |
| Time from symptoms onset to hospital admission, d | |||
| Mean (95% CI) | 3.8 (1.6‐6.0) | 6.6 (5.7‐7.5) | 6.6 (5.9‐7.4) |
| Median (IQR) | 2.0 (1.0‐7.0) | 7.0 (6.0‐7.0) | 6.0 (3.0‐8.0) |
| Time from hospital admission to final outcome, d | |||
| Mean (95% CI) | 11.1 (7.8‐14.5) | >29.4 (26.2‐32.7) | 9.6 (8.5‐10.6) |
| Median (IQR) | 11.0 (6.0‐18.5) | >28.0 (27.0‐31.0) | 8.0 (5.0‐12.5) |
| Time from symptom onset to final outcome, d | |||
| Mean (95% CI) | 14.9 (11.3‐18.6) | >36.0 (32.9‐39.1) | 16.0 (14.9‐17.1) |
| Median (IQR) | 15.0 (8.5‐20.0) | 35.0 (33.0‐39.0) | 15.0 (12.0‐20.0) |
| Serological profile (n = 176 serum samples) | |||
| IgG levels (AU/mL) | |||
| Mean (95% CI) | 24.1 (6.0‐42.2) | 41.3 (2.8‐85.4) | 23.9 (17.4‐30.3) |
| Median (IQR) | 0.3 (0.04‐29.4) | 15.3 (1.7‐32.9) | 5.0 (0.3‐32.6) |
| IgM levels (AU/mL) | |||
| Mean (95% CI) | 1.4 (0.7‐2.0) | 2.4 (1.4‐3.5) | 4.7 (2.3‐7.1) |
| Median (IQR) | 0.5 (0.26‐2.1) | 2.4 (1.2‐3.1) | 1.7 (0.6‐4.6) |
| Time from symptom onset to immune response (days) | |||
| Mean (95% CI) | 12.9 (6.9‐18.9) | 12.0 (9.0‐15.0) | 12.4 (11.4‐13.4) |
| Median (IQR) | 13 (7.3‐15.0) | 12.0 (8.0‐16.0) | 12.0 (9.0‐15.0) |
| Other laboratory findings at admission | |||
| Hemoglobin (12‐16 g/dL): n (%) | N = 9 (53.0); I = 0 (0.0); D = 8 (47.0) | N = 6 (85.7); I = 0 (0.0); D = 1 (14.3) | N = 64 (63.4); I = 0 (0.0); D = 37 (36.6) |
| White blood cells count (4‐10×109/L): n (%) | N = 12 (70.6); I = 3 (17.6); D = 2 (11.8) | N = 6 (85.7); I = 1 (14.3); D = 0 (0.0) | N = 66 (65.3); I = 21 (20.8); D = 14 (13.9) |
| Neutrophil count (1.6‐7 × 109/L): n (%) | N = 11 (64.7); I = 5 (29.4); D = 1 (5.9) | N = 5 (71.4); I = 2 (28.6); D = 0 (0.0) | N = 64 (63.4); I = 28 (27.7); D = 9 (8.9) |
| Lymphocyte count (0.8‐5 × 109/L): n (%) | N = 5 (29.4); I = 1 (5.9); D = 11 (64.7) | N = 4 (57.1); I = 0 (0.0); D = 3 (42.9) | N = 58 (57.4); I = 0 (0.0); D = 43 (42.6) |
| Platelet count (150‐450 × 109/L): n (%) | N = 10 (58.8); I = 3 (17.6); D = 4 (23.6) | N = 2 (28.6); I = 1 (14.3); D = 4 (57.1) | N = 88 (87.1); I = 4 (4.0); D = 9 (8.9) |
| CRP (<50 mg/L): n (%) | N = 0 (0.0); I = 17 (100.0) | N = 0 (0.0); I = 7 (100.0) | N = 1 (1.0); I = 100 (99.0) |
| LDH (<250 U/L): n (%) | N = 1 (5.9); I = 16 (94.1) | N = 0 (0.0); I = 7 (100.0) | N = 16 (15.8); I = 85 (84.2) |
| ALT (N < 36 U/L), and/or AST (N < 48 U/L) and/or GGT (N < 49 U/L), and/or T.Bili (N < 17 umol/L) and/or ALP (N = 40‐145 U/L): n (%) | N = 4 (23.5); I = 13 (76.5) | N = 4 (57.1); I = 3 (42.9) | N = 41 (40.6); I = 60 (59.4) |
| Urea (N = 2‐9 mmol/L) and/or SCr (N = 53‐106 µmol/L): n (%) | N = 9 (52.9); I = 8 (47.1) | N = 5 (71.4); I = 2 (28.6) | N = 67 (66.3); I = 34 (33.7) |
| Hs‐Tpn‐T (N < 10 ng/L): n (%) | N = 4; I = 3 (42.9; NR in 10 patients) | N = 1; I = 2 (66.7; NR in 4 patients) | N = 14; I = 10 (41.7; NR in 76 patients) |
| Symptoms at admission | |||
| Fever (>38‐38.5°C; temporal temperature): n (%) | 17 (100.0) | 7 (100.0) | 101 (100.0) |
| Cough: n (%) | 16 (94.1) | 7 (100.0) | 96 (95.0) |
| Dyspnea: n (%) | 16 (94.1) | 7 (100.0) | 97 (96.0) |
| Myalgia and or fatigue: n (%) | 17 (100.0) | 7 (100.0) | 24 (23.8) |
| Rhinorrhea and sore throat: n (%) | 2 (11.8) | 1 (14.3) | 13 (12.9) |
| Diarrhea: n (%) | 3 (17.6) | 1 (14.3) | 10 (9.9) |
| Nausea, vomiting and abdominal pain: n (%) | 0 (0.0) | 0 (0.0) | 14 (13.9) |
| Other symptoms (including headache, confusion, unconsciousness, anosmia and dysgeusia): n (%) | 6 (35.3) | 3 (42.9) | 46 (45.5) |
| Complications during hospitalization | |||
| Viral pneumonia and acute hypoxemia: n (%) | 17 (100.0) | 7 (100.0) | 101 (100.0) |
| Critical care procedures (including invasive ventilation and/or ECMO): n (%) | 6 (35.3) | 7/7 (100.0) | 20/101 (19.8) |
| ARDS: n (%) | 17 (100.0) | 7 (100.0) | 10 (9.9) |
| Cerebro‐cardiovascular diseases: n (%) | 3 (17.6) | 2 (28.6) | 14 (13.9) |
| Septic choc: n (%) | 1 (5.9) | 0 (0.0) | 0 (0.0) |
| Acute kidney failure: n (%) | 2 (11.8) | 1 (14.3) | 6 (5.9) |
| Respiratory super‐infection: n (%) | 2 (11.8) | 1 (14.3) | 11 (10.9) |
| Other concomitant infections: n (%) | 1 (5.9) | 1 (14.3) | 8 (7.9) |
| Antiviral/bacterial/fungal treatments during hospitalization | |||
| Hydroxychloroquine (other anti‐retroviral): n (%) | 12 (70.1) | 7 (100.0) | 96 (95.0) |
| Azithromycin: n | 4 | 0 | 24 |
| Other antibiotics: n | 4 | 2 | 20 |
| Overall antibiotics: n (%) | 8 (47.1) | 2 (28.6) | 44 (43.6) |
| Anti‐fungal treatments: n (%) | 0 (0.0) | 0 (0.0) | 2 (2.0) |
| Corticosteroids: n (%) | 4 (23.5) | 0 (0.0) | 6 (5.9) |
| Comorbidities | |||
| All comorbidities: n (%) | 14 (82.4) | 5 (71.4) | 88 (87.1) |
| Arterial hypertension: n (%) | 7 (41.2) | 3 (42.9) | 45 (44.6) |
| Diabetes: n (%) | 2 (11.8) | 3 (42.9) | 28 (27.7) |
| Cardiovascular diseases: n (%) | 8 (47.1) | 2 (28.6) | 15 (14.9) |
| Chronic kidney: n (%) | 5 (29.5) | 0 (0.0) | 28 (2) |
| Lung diseases (asthma, COPD): n (%) | 2 (11.8) | 0 (0.0) | 8 (7.9) |
| Leucopenia (immunosuppressive treatments (autoimmune diseases and organ transplantation), chemotherapies, active cancers): n (%) | 3 (17.6) | 2 (28.6) | 12 (11.9) |
| HIV condition: n (%) | 1 (5.9) | 0 (0.0) | 1 (1.0) |
| Pregnancy: n (%) | 0/9 (0.0) | NA | 1/49 (2.0) |
Note: Considering there were not enough subjects (<20 patients) in deceased and remained at hospital subgroups, we did not realize any statistical analysis.
Abbreviations: 95% CI, 95% confidence interval; ALP, alkaline phosphatase; ALT, alanine aminotransferase; ARDS, acute respiratory distress syndrome; AST, aspartate aminotransferase; COPD, chronic obstructive pulmonary disease; COVID‐19, coronavirus disease 2019; CRP, C‐reactive protein; CT, computed tomography; D, decreased; ECMO, extracorporeal membrane oxygenation; Flu, influenza A and B; GGO, ground‐glass opacity; GGT, gamma glutamyl transpeptidase; hs‐Tpn‐T, high‐sensitive cardiac troponin T; I, increased; IQR, interquartile range; LDH, lactate dehydrogenase; N, normal; NA, not applicable; NR, not realized; pro‐BNP, B‐type natriuretic peptide; RSV, respiratory syncytial virus; RT‐qPCR, quantitative reverse transcriptase polymerase chain reaction; SCr, serum creatinine; T.Bili, total bilirubin; Urea, blood urea nitrogen.
Association between clinical/biological characteristics and the immune response in COVID‐19 patients
| Factors | Positive immune response (n = 100) | Negative immune response (n = 25) |
|
|---|---|---|---|
| Deceased: n | 8 | 9 | .001 |
| Sampling period, d | |||
| Mean (95% CI) | 12.8 (11.9‐13.6) | 7.6 (6.2‐9.1) | <.001 |
| Median (IQR) | 13.0 (10.0‐16.0) | 8.0 (4.0‐10.3) | |
| Symptoms onset to hospital admission, d | |||
| Mean (95% CI) | 6.8 (6.1‐7.6) | 3.9 (2.5‐5.3) | .001 |
| Median (IQR) | 7.0 (4.0‐9.0) | 2.0 (1.0‐7.5) | |
| Hospital admission to final outcome, d | |||
| Mean (95% CI) | 11.2 (9.7‐12.6) | 9.8 (7.4‐12.2) | .51 |
| Median (IQR) | 9.5 (6.0‐14.0) | 9.0 (5.0‐14.0) | |
| Age, y: Mean (95% CI) | 63.7 (60.9‐66.4) | 71.4 (62.2‐80.6) | .03 |
| Sex: n of male | 57 | 9 | .07 |
| Abnormal biochemistry markers: n | 100 | 25 | NS |
| Abnormal CBC markers: n | 44 | 13 | NS |
| Comorbidities: n | 89 | 18 | NS |
| Hydroxychloroquine: n | 87 | 21 | .75 |
| Antibiotics: n | 45 | 7 | .17 |
| Corticosteroids: n | 8 | 2 | >.99 |
| Immunocompromised: n | 9 | 5 | .15 |
Note: biochemistry markers are CRP, hepatic, and renal function markers; CBC markers are hemoglobin, white blood cells, neutrophil, lymphocyte, and platelet count; and immunocompromised included chemotherapy and immunosuppressive treatment.
Abbreviations: 95% CI, 95% confidence interval; CBC, complete blood count; COVID‐19, coronavirus disease 2019; CRP, C‐reactive protein; IQR, interquartile range; NS, not statistically significant.
Figure 1A, Receiver operating characteristic (ROC) curve for IgG levels obtained from 176 samples at different stages of infection. Area under the ROC curve (AUC) was estimated = 0.846 (CI = 0.801‐0.891), P < .0001. The latter AUC suggests excellent discriminatory power of the test between the COVID‐19 patients and the COVID‐19 free groups. B, ROC curve for IgM levels obtained from 176 samples at different stages of infection. AUC was estimated = 0.831 (CI = 0.782‐0.880), P < .0001. The latter AUC suggests excellent discriminatory power of the test between the COVID‐19 patients and the COVID‐19 free groups. C, ROC curve for IgG levels obtained from 44 samples between 15 and 25 days after symptoms onset. AUC was estimated = 0.963 (CI = 0.916‐1.000), P < .0001. The latter AUC suggests outstanding discriminatory power of the test between the COVID‐19 patients and the COVID‐19 free groups. D, ROC curve for IgM levels obtained from 44 samples between 15 and 25 days after symptoms onset. AUC was estimated = 0.970 (CI = 0.931‐1.000), P < .0001. The latter AUC suggests outstanding discriminatory power of the test between the COVID‐19 patients and the COVID‐19 free groups. CI, confidence interval; COVID‐19, coronavirus disease 2019; IgG, immunoglobulin G
Median (IQR) of subgroups Ab levels and overall/subgroups DSn, NPV, AUC, and test accuracy
| Days after SO (n = samples) | 0‐4 Days (n = 21) | 5‐9 Days (n = 50) | 10‐14 Days (n = 61) | 15‐25 Days (n = 44) | 0‐25 Days (n = 176) | |
|---|---|---|---|---|---|---|
| Antibody, AU/mL | ||||||
| IgG | Median IgG (IQR) | 0.07 | 0.32 | 5.03 | 47.37 | 3.70 |
| (0.039‐1.07) | (0.08‐9.03) | (0.87‐18.89) | (4.53‐103.00) | (0.18‐32.43) | ||
| DSn% (95% CI) | 23.81 | 38.00 | 75.41 | 90.91 | 62.50 | |
| (10.63‐45.09) | (25.86‐51.85) | (63.32‐84.49) | (78.84‐96.41) | (55.15‐69.31) | ||
| NPV% (95% CI) | 86.21 | 76.92 | 86.96 | 96.15 | 60.61 | |
| (83.11‐88.81) | (72.66‐80.69) | (81.12‐91.19) | (90.76‐98.45) | (55.92‐65.11) | ||
| Accuracy % (95% CI) | 86.78 | 80.00 | 90.68 | 97.22 | 76.45 | |
| (79.42‐92.25) | (72.70‐86.08) | (85.10‐94.69) | (93.04‐99.24) | (70.99‐81.33) | ||
| AUC (95% CI) | 0.55 | 0.78 | 0.92 | 0.96 | 0.85 | |
| (0.40‐0.71) | (0.69‐0.87) | (0.86‐0.97) | (0.92‐1.00) | (0.80‐0.89) | ||
| IgM | Median IgM (IQR) | 0.30 | 0.59 | 1.81 | 2.87 | 1.30 |
| (0.18‐0.53) | (0.32‐1.42) | (0.67‐4.14) | (1.62‐4.50) | (0.46‐3.13) | ||
| DSn% (95% CI) | 9.52 | 40.00 | 72.13 | 90.91 | 60.23 | |
| (1.69‐28.91) | (27.61‐53.82) | (59.83‐81.81) | (78.84‐96.41) | (52.85‐67.17) | ||
| NPV% (95% CI) | 84.03 | 76.92 | 85.47 | 96.15 | 58.82 | |
| (82.08‐85.81) | (72.66‐80.69) | (79.71‐89.80) | (90.76‐98.45) | (54.36‐63.15) | ||
| Accuracy % (95% CI) | 84.30 | 80.00 | 89.44 | 97.22 | 74.64 | |
| (76.57‐90.27) | (72.70‐86.08) | (83.63‐93.73) | (93.04‐99.24) | (69.08‐79.66) | ||
| AUC (95% CI) | 0.52 | 0.74 | 0.92 | 0.97 | 0.83 | |
| (0.34‐0.70) | (0.64‐0.84) | (0.87‐0.98) | (0.93‐1.00) | (0.78‐0.88) | ||
| IgG/IgM | DSn% (95% CI) | 28.57 | 56.00 | 80.33 | 95.45 | 70.45 |
| (13.81‐49.96) | (42.31‐68.84) | (68.69‐88.37) | (84.87‐99.19) | (63.34‐76.70) | ||
| NPV% (95% CI) | 86.96 | 81.30 | 89.29 | 98.04% | 65.79 | |
| (83.57‐89.73) | (76.30‐85.45) | (83.38‐93.26) | (92.81‐99.49) | (60.49‐70.73) | ||
| Accuracy % (95% CI) | 87.60 | 84.67 | 92.55 | 98.61 | 81.16 | |
| (80.38‐92.89) | (77.89‐90.02) | (87.34‐96.09) | (95.07‐99.83) | (76.04‐85.60) | ||
| AUC (95% CI) | 0.55 | 0.80 | 0.94 | 0.98 | 0.73 | |
| (0.36‐0.73) | (0.71‐0.89) | (0.89‐0.99) | (0.94‐1.00) | (0.67‐0.79) | ||
Note: All P values were <.0001, except for IgG (P = .43), IgM (P = .77), and IgG/IgM (P = .50) obtained by computing 0 to 4 days results after the onset of symptoms.
Abbreviations: Ab, antibody; AU, arbitrary unit; AUC , area under the ROC curve; CI, confidence interval; DSn, diagnostic sensitivity; IgG, immunoglobulin G; IgG/IgM, both IgG and IgM at the same time; IQR, interquartile range; NPV, negative predictive value; ROC, receiver operating characteristic; SO, symptoms onset.
Analytical assessments of the CLIA method
| Analysis | IgG | IgM | |
|---|---|---|---|
| Precision | Mean of NCL, AU/mL | 0.02 | 0.36 |
| NCL within‐run CV% | 19.2 | 12.6 | |
| NCL between‐run CV% | 40.0 | 43.5 | |
| Mean of PCL, AU/mL | 3.56 | 3.57 | |
| PCL Within‐run CV% | 1.2 | 2.2 | |
| PCL Between‐run CV% | 6.3 | 4.8 | |
| Trueness | Means of PCLs, AU/mL | 3.72 | 3.69 |
| Bias (%) | −5.0 | −6.0 | |
| LOB, AU/mL | 0.02 | 0.51 | |
| LOD, AU/mL | 0.03 | 0.58 | |
| LOQ | Means of pool 1′ Ab levels (AU/mL); overall CV% | 3.57; 6.5 | 2.58; 4.8 |
| Means of pool 2′ Ab levels (AU/mL); overall CV% | 83.27; 12.3 | NR | |
| Means of pool 3′ Ab levels (AU/mL); overall CV% | 191.15; 7.9 | NR | |
| % Carry‐over | 0.01 | 0.90 | |
| Linearity (dilution titer took into account) | Means of pool 1′ Ab levels (AU/mL) × 1; recovery % | 0.07; 0.1 | 0.51; 3.4 |
| Means of pool 2′ Ab levels (AU/mL) × 4; recovery % | 215.71; 207.3 | 33.73; 224.8 | |
| Means of pool 3′ Ab levels (AU/mL) × 2; recovery % | 161.33; 155.0 | 21.42; 142.8 | |
| Means of pool 4′ Ab levels (AU/mL) × 1.33; recovery % | 128.92; 123.9 | 16.28; 108.5 | |
| Means of pool 5′ Ab levels (AU/mL) × 1; recovery % | 104.07; 100 | 15.00; 100 | |
Abbreviations: Ab, antibody; AU, arbitrary unit; CLIA, chemiluminescent immunoassay; CV, coefficients of variation; LOB, limit of blank; LOD, limit of detection; LOQ , limit of quantification; NCL, negative control level; PCL, positive control level.