Literature DB >> 3277275

Replacements of Pro86 in phage T4 lysozyme extend an alpha-helix but do not alter protein stability.

T Alber1, J A Bell, D P Sun, H Nicholson, J A Wozniak, S Cook, B W Matthews.   

Abstract

To investigate the relation between protein stability and the predicted stabilities of individual secondary structural elements, residue Pro86 in an alpha-helix in phage T4 lysozyme was replaced by ten different amino acids. The x-ray crystal structures of seven of the mutant lysozymes were determined at high resolution. In each case, replacement of the proline resulted in the formation of an extended alpha-helix. This involves a large conformational change in residues 81 to 83 and smaller shifts that extend 20 angstroms across the protein surface. Unexpectedly, all ten amino acid substitutions marginally reduce protein thermostability. This insensitivity of stability to the amino acid at position 86 is not simply explained by statistical and thermodynamic criteria for helical propensity. The observed conformational changes illustrate a general mechanism by which proteins can tolerate mutations.

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Year:  1988        PMID: 3277275     DOI: 10.1126/science.3277275

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  24 in total

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Journal:  J Cell Biol       Date:  2001-05-14       Impact factor: 10.539

2.  A de novo redesign of the WW domain.

Authors:  Christina M Kraemer-Pecore; Juliette T J Lecomte; John R Desjarlais
Journal:  Protein Sci       Date:  2003-10       Impact factor: 6.725

3.  Experimental evolution of adenylate kinase reveals contrasting strategies toward protein thermostability.

Authors:  Corwin Miller; Milya Davlieva; Corey Wilson; Kristopher I White; Rafael Couñago; Gang Wu; Jeffrey C Myers; Pernilla Wittung-Stafshede; Yousif Shamoo
Journal:  Biophys J       Date:  2010-08-04       Impact factor: 4.033

4.  Thermodynamics of replacing an alpha-helical Pro residue in the P40S mutant of Escherichia coli thioredoxin.

Authors:  A Chakrabarti; S Srivastava; C P Swaminathan; A Surolia; R Varadarajan
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

5.  Determination by systematic deletion of the amino acids essential for catalysis by ricin A chain.

Authors:  K N Morris; I G Wool
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-01       Impact factor: 11.205

6.  Theory for protein mutability and biogenesis.

Authors:  K F Lau; K A Dill
Journal:  Proc Natl Acad Sci U S A       Date:  1990-01       Impact factor: 11.205

7.  Potential use of additivity of mutational effects in simplifying protein engineering.

Authors:  M M Skinner; T C Terwilliger
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-01       Impact factor: 11.205

8.  Dynamics and unfolding pathways of a hyperthermophilic and a mesophilic rubredoxin.

Authors:  T Lazaridis; I Lee; M Karplus
Journal:  Protein Sci       Date:  1997-12       Impact factor: 6.725

9.  A method for introducing site-specific mutations using oligonucleotide primers and its application to site-saturation mutagenesis.

Authors:  M J O'Donohue; G G Kneale
Journal:  Mol Biotechnol       Date:  1996-10       Impact factor: 2.695

10.  Destabilizing effect of proline substitutions in two helical regions of T4 lysozyme: leucine 66 to proline and leucine 91 to proline.

Authors:  T M Gray; E J Arnoys; S Blankespoor; T Born; R Jagar; R Everman; D Plowman; A Stair; D Zhang
Journal:  Protein Sci       Date:  1996-04       Impact factor: 6.725

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