| Literature DB >> 32724164 |
Chun-Ming Huang1,2,3,4, Ming-Yii Huang1,2,3,5, Ching-Wen Huang6,7, Hsiang-Lin Tsai6,7, Wei-Chih Su6,7, Wei-Chiao Chang8,9, Jaw-Yuan Wang10,11,12,13,14,15, Hon-Yi Shi16,17,18,19.
Abstract
For patients with locally advanced rectal cancer (LARC), achieving a pathological complete response (pCR) after neoadjuvant chemoradiotherapy (CRT) provides them with the optimal prognosis. However, no reliable prediction model is presently available. We evaluated the performance of an artificial neural network (ANN) model in pCR prediction in patients with LARC. Predictive accuracy was compared between the ANN, k-nearest neighbor (KNN), support vector machine (SVM), naïve Bayes classifier (NBC), and multiple logistic regression (MLR) models. Data from two hundred seventy patients with LARC were used to compare the efficacy of the forecasting models. We trained the model with an estimation data set and evaluated model performance with a validation data set. The ANN model significantly outperformed the KNN, SVM, NBC, and MLR models in pCR prediction. Our results revealed that the post-CRT carcinoembryonic antigen is the most influential pCR predictor, followed by intervals between CRT and surgery, chemotherapy regimens, clinical nodal stage, and clinical tumor stage. The ANN model was a more accurate pCR predictor than other conventional prediction models. The predictors of pCR can be used to identify which patients with LARC can benefit from watch-and-wait approaches.Entities:
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Year: 2020 PMID: 32724164 PMCID: PMC7387337 DOI: 10.1038/s41598-020-69345-9
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1Flow chart of patient selection for the training and validation cohorts.
Patient characteristics.
| Variables | The training cohort mean ± SD/N (%) | The validation cohort mean ± SD/N (%) |
|---|---|---|
| 236 | 34 | |
| Gender | ||
| Female | 82 (34.7) | 12 (35.3) |
| Male | 154 (65.3) | 22 (64.7) |
| Age | 62.1 ± 11.5 | 62.8 ± 12.2 |
| Chemotherapy | ||
| Fluoropyrimidine | 95 (40.3) | 15 (44.1) |
| FOLFOX | 141 (59.7) | 19 (55.9) |
| Tumor location | ||
| Low/middle | 141 (59.7) | 20 (58.8) |
| Upper | 95 (40.3) | 14 (41.2) |
| Clinical T stage | ||
| T2 | 13 (5.5) | 2 (5.9) |
| T3 | 184 (78) | 27 (79.4) |
| T4 | 39 (16.5) | 5 (14.7) |
| Clinical N stage | ||
| N0 | 36 (15.3) | 6 (17.7) |
| N1 | 145 (61.4) | 20 (58.8) |
| N2 | 55 (23.3) | 8 (23.5) |
| TNM stage | ||
| II | 36 (15.3) | 6 (17.6) |
| III | 200 (84.7) | 28 (82.4) |
| Tumor grade | ||
| Well differentiation | 16 (6.8) | 2 (5.8) |
| Moderate differentiation | 212 (89.8) | 31 (91.3) |
| Poor differentiation | 8 (3.4) | 1 (2.9) |
| Pre-CRT CEA (ng/mL) | ||
| ≦ 5 | 144 (61) | 20 (58.8) |
| > 5 | 92 (39.0) | 14 (41.2) |
| Anemia | ||
| Hb (g/dL)≦ 10 | 76 (32.2) | 10 (29.4) |
| Hb (g/dL) > 10 | 160 (67.8) | 24 (70.6) |
| Diarrhea | ||
| Grade 0–1 | 102 (43.2) | 14 (41.2) |
| Grade 2–3 | 134 (56.8) | 20 (58.8) |
| Urinary symptoms | ||
| Grade 0–1 | 218 (92.4) | 31 (91.2) |
| Grade 2–3 | 18 (7.6) | 3 (8.8) |
| Dermatitis | ||
| Grade 0–1 | 166 (70.3) | 24 (70.6) |
| Grade 2–3 | 70 (29.7) | 10 (29.4) |
| Leukopenia | ||
| WBC≦ 3,000 (/uL) | 65 (27.5) | 11 (32.4) |
| WBC > 3,000 (/uL) | 171 (72.5) | 23 (67.6) |
| RT dose (cGy) | ||
| 5,040 | 11 (4.7) | 1 (2.9) |
| 5,000 | 181 (76.7) | 27 (79.5) |
| 4,500 | 44 (18.6) | 6 (17.6) |
| RT-surgery interval | ||
| ≦8 weeks | 81 (34.3) | 14 (41.2) |
| > 8 weeks | 155 (65.7) | 20 (58.8) |
| Post-CRT CEA (ng/mL) | ||
| ≦ 2 | 90 (38.1) | 13 (38.2) |
| > 2 | 146 (61.9) | 21 (61.8) |
| Treatment response | ||
| pCR | 56 (23.7) | 7 (20.6) |
| Non-pCR | 180 (76.3) | 27 (79.4) |
CEA carcinoembryonic antigen, CRT chemoradiotherapy, FOLFOX fluorouracil, leucovorin, and oxaliplatin, Hb hemoglobin, pCR pathological complete response, SD standard deviation, RT radiation therapy, WBC white blood cell.
The univariate analysis of logistic regression model using selected risk factors related to pathological complete response (N = 236).
| Variables | OR | 95% C.I | P-value |
|---|---|---|---|
| Male vs. female | 3.53 | 2.41–5.17 | < 0.001 |
| 1.02 | 1.01–1.02 | < 0.001 | |
| FOLFOX vs. fluoropyrimidine | 2.53 | 1.75–3.64 | < 0.001 |
| Upper vs. low/middle | 4.28 | 2.56–7.15 | < 0.001 |
| T2 vs. T3 | 2.92 | 2.09–4.06 | < 0.001 |
| T2 vs. T4 | 6.80 | 2.66–17.4 | < 0.001 |
| N0 vs. N1 | 3.68 | 2.47–5.47 | < 0.001 |
| N0 vs. N2 | 4.00 | 2.07–7.75 | < 0.001 |
| II vs. III | 3.76 | 2.68–5.29 | < 0.001 |
| Well differentiation vs. moderate differentiation | 3.00 | 2.20–4.09 | < 0.001 |
| Well differentiation vs. poor differentiation | 3.68 | 2.40–6.97 | < 0.001 |
| ≦ 5 vs. > 5 | 4.75 | 2.77–8.14 | < 0.001 |
| Grade 0–1 vs. grade 2–3 | 3.32 | 2.30–4.80 | < 0.001 |
| Grade 0–1 vs. grade 2–3 | 2.62 | 1.80–3.83 | < 0.001 |
| Grade 0–1 vs. grade 2–3 | 8.00 | 1.84–34.79 | 0.006 |
| Grade 0–1 vs. grade 2–3 | 3.67 | 2.07–6.49 | < 0.001 |
| Grade 0–1 vs. grade 2–3 | 2.89 | 2.05–4.07 | < 0.001 |
| 5,000 vs. 4,500 | 2.69 | 1.94–3.74 | < 0.001 |
| 5,040 vs. 4,500 | 7.80 | 3.07–19.79 | < 0.001 |
| > 8wk vs. ≦8wk | 2.44 | 1.73–3.46 | < 0.001 |
| ≦ 2 vs. > 2 | 1.58 | 0.86–2.88 | < 0.001 |
CEA carcinoembryonic antigen, CI confidence interval, CRT chemoradiotherapy, FOLFOX fluorouracil, leucovorin, and oxaliplatin, Hb hemoglobin, OR odds ratio, pCR pathological complete response, RT radiation therapy, WBC white blood cell.
Comparison of 1,000 pairs of prediction models for predicting pathological complete response.
| Sensitivity | 1-Specificity | PPV | NPV | Accuracy | AUROC | |
|---|---|---|---|---|---|---|
| ANN | 0.93 | 0.84 | 0.87 | 0.90 | 0.87 | 0.79 |
| KNN | 0.81 | 0.64 | 0.86 | 0.64 | 0.78 | 0.72 |
| SVM | 0.91 | 0.57 | 0.85 | 0.57 | 0.64 | 0.73 |
| NBC | 0.91 | 0.49 | 0.75 | 0.87 | 0.75 | 0.50 |
| MLR | 0.90 | 0.47 | 0.83 | 0.39 | 0.80 | 0.79 |
| ANN | 0.94 | 0.87 | 0.89 | 0.88 | 0.86 | 0.81 |
| KNN | 0.89 | 0.49 | 0.87 | 0.46 | 0.84 | 0.72 |
| SVM | 0.90 | 0.82 | 0.85 | 0.71 | 0.85 | 0.74 |
| NBC | 0.90 | 0.85 | 0.82 | 0.75 | 0.78 | 0.51 |
| MLR | 0.84 | 0.61 | 0.88 | 0.69 | 0.85 | 0.77 |
ANN artificial neural network, KNN K nearest neighbor, SVM support vector machines, NBC Naive Bayes classifier, MLR multiple logistic regression, PPV positive predictive value, NPV negative predictive value, AUROC area under the receiver operating characteristic.
Comparative performance indices of prediction models when using 34 new validation datasets to predict pathological complete response.
| Sensitivity | 1-Specificity | PPV | NPV | Accuracy | AUROC | |
|---|---|---|---|---|---|---|
| ANN | 0.94 | 0.80 | 0.89 | 0.87 | 0.88 | 0.84 |
| KNN | 0.80 | 0.67 | 0.87 | 0.60 | 0.80 | 0.74 |
| SVM | 0.91 | 0.76 | 0.86 | 0.72 | 0.71 | 0.76 |
| NBC | 0.90 | 0.53 | 0.79 | 0.84 | 0.80 | 0.63 |
| MLR | 0.88 | 0.79 | 0.84 | 0.49 | 0.83 | 0.77 |
ANN artificial neural network, KNN K nearest neighbor, SVM support vector machines, NBC Naive Bayes classifier, MLR multiple logistic regression, PPV positive predictive value, NPV negative predictive value, AUROC area under the receiver operating characteristic.
Global sensitivity analysis of the ANN model in predicting pathological complete response.
| Rank 1st | Rank 2nd | Rank 3rd | Rank 4th | Rank 5th | |
|---|---|---|---|---|---|
| Variables | Post-CRT CEA | RT-surgery interval | Chemotherapy regimen | Clinical N stage | Clinical T stage |
| VSR | 1.57 | 1.50 | 1.45 | 1.37 | 1.32 |
ANN artificial neural network, CEA carcinoembryonic antigen, CRT chemoradiotherapy, RT radiation therapy, VSR variable sensitivity ratio.