Literature DB >> 32686888

Replacement of the Cobalt Center of Vitamin B12 by Nickel: Nibalamin and Nibyric Acid Prepared from Metal-Free B12  Ligands Hydrogenobalamin and Hydrogenobyric Acid.

Christoph Kieninger1,2, Klaus Wurst3, Maren Podewitz2,3, Maria Stanley4, Evelyne Deery4, Andrew D Lawrence4, Klaus R Liedl2,3, Martin J Warren4,5, Bernhard Kräutler1,2.   

Abstract

The (formal) replacement of Co in cobalamin (Cbl) by NiII generates nibalamin (Nibl), a new transition-metal analogue of vitamin B12 . Described here is Nibl, synthesized by incorporation of a NiII ion into the metal-free B12  ligand hydrogenobalamin (Hbl), itself prepared from hydrogenobyric acid (Hby). The related NiIIcorrin nibyric acid (Niby) was similarly synthesized from Hby, the metal-free cobyric acid ligand. The solution structures of Hbl, and Niby and Nibl, were characterized by spectroscopic studies. Hbl features two inner protons bound at N2 and N4 of the corrin ligand, as discovered in Hby. X-ray analysis of Niby shows the structural adaptation of the corrin ligand to NiII ions and the coordination behavior of NiII . The diamagnetic Niby and Nibl, and corresponding isoelectronic CoI corrins, were deduced to be isostructural. Nibl is a structural mimic of four-coordinate base-off Cbls, as verified by its ability to act as a strong inhibitor of bacterial adenosyltransferase.
© 2020 The Authors. Published by Wiley-VCH GmbH.

Entities:  

Keywords:  cobalamins; crystal structures; porphyrinoids; transition metals; vitamins

Year:  2020        PMID: 32686888      PMCID: PMC7693184          DOI: 10.1002/anie.202008407

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  46 in total

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Authors:  E N Marsh; C L Drennan
Journal:  Curr Opin Chem Biol       Date:  2001-10       Impact factor: 8.822

2.  Accurate redetermination of the X-ray structure and electronic bonding in adenosylcobalamin.

Authors:  Lizhi Ouyang; Paul Rulis; W Y Ching; Giorgio Nardin; Lucio Randaccio
Journal:  Inorg Chem       Date:  2004-02-23       Impact factor: 5.165

3.  Antivitamin B12 Inhibition of the Human B12 -Processing Enzyme CblC: Crystal Structure of an Inactive Ternary Complex with Glutathione as the Cosubstrate.

Authors:  Markus Ruetz; Aranganathan Shanmuganathan; Carmen Gherasim; Agnes Karasik; Robert Salchner; Christoph Kieninger; Klaus Wurst; Ruma Banerjee; Markos Koutmos; Bernhard Kräutler
Journal:  Angew Chem Int Ed Engl       Date:  2017-05-23       Impact factor: 15.336

Review 4.  Radical enzymes in anaerobes.

Authors:  Wolfgang Buckel; Bernard T Golding
Journal:  Annu Rev Microbiol       Date:  2006       Impact factor: 15.500

5.  Organometallic B12-DNA conjugate: synthesis, structure analysis, and studies of binding to human B12-transporter proteins.

Authors:  Miriam Hunger; Elena Mutti; Alexander Rieder; Barbara Enders; Ebba Nexo; Bernhard Kräutler
Journal:  Chemistry       Date:  2014-08-28       Impact factor: 5.236

Review 6.  Radical-mediated enzymatic methylation: a tale of two SAMS.

Authors:  Qi Zhang; Wilfred A van der Donk; Wen Liu
Journal:  Acc Chem Res       Date:  2011-11-18       Impact factor: 22.384

7.  Reductive dehalogenase structure suggests a mechanism for B12-dependent dehalogenation.

Authors:  Karl Ap Payne; Carolina P Quezada; Karl Fisher; Mark S Dunstan; Fraser A Collins; Hanno Sjuts; Colin Levy; Sam Hay; Stephen Ej Rigby; David Leys
Journal:  Nature       Date:  2014-10-19       Impact factor: 49.962

8.  A B12-dependent radical SAM enzyme involved in oxetanocin A biosynthesis.

Authors:  Jennifer Bridwell-Rabb; Aoshu Zhong; He G Sun; Catherine L Drennan; Hung-Wen Liu
Journal:  Nature       Date:  2017-03-27       Impact factor: 49.962

9.  A multicolor riboswitch-based platform for imaging of RNA in live mammalian cells.

Authors:  Esther Braselmann; Aleksandra J Wierzba; Jacob T Polaski; Mikołaj Chromiński; Zachariah E Holmes; Sheng-Ting Hung; Dilara Batan; Joshua R Wheeler; Roy Parker; Ralph Jimenez; Dorota Gryko; Robert T Batey; Amy E Palmer
Journal:  Nat Chem Biol       Date:  2018-07-30       Impact factor: 15.040

10.  The Hydrogenobyric Acid Structure Reveals the Corrin Ligand as an Entatic State Module Empowering B12 Cofactors for Catalysis.

Authors:  Christoph Kieninger; Evelyne Deery; Andrew D Lawrence; Maren Podewitz; Klaus Wurst; Emi Nemoto-Smith; Florian J Widner; Joseph A Baker; Steffen Jockusch; Christoph R Kreutz; Klaus R Liedl; Karl Gruber; Martin J Warren; Bernhard Kräutler
Journal:  Angew Chem Int Ed Engl       Date:  2019-06-26       Impact factor: 15.336

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  4 in total

1.  Replacement of the Cobalt Center of Vitamin B12 by Nickel: Nibalamin and Nibyric Acid Prepared from Metal-Free B12  Ligands Hydrogenobalamin and Hydrogenobyric Acid.

Authors:  Christoph Kieninger; Klaus Wurst; Maren Podewitz; Maria Stanley; Evelyne Deery; Andrew D Lawrence; Klaus R Liedl; Martin J Warren; Bernhard Kräutler
Journal:  Angew Chem Int Ed Engl       Date:  2020-09-02       Impact factor: 15.336

2.  Cooperative NHC/Photoredox Catalyzed Ring-Opening of Aryl Cyclopropanes to 1-Aroyloxylated-3-Acylated Alkanes.

Authors:  Zhijun Zuo; Constantin G Daniliuc; Armido Studer
Journal:  Angew Chem Int Ed Engl       Date:  2021-10-25       Impact factor: 16.823

Review 3.  The requirement for cobalt in vitamin B12: A paradigm for protein metalation.

Authors:  Deenah Osman; Anastasia Cooke; Tessa R Young; Evelyne Deery; Nigel J Robinson; Martin J Warren
Journal:  Biochim Biophys Acta Mol Cell Res       Date:  2020-10-21       Impact factor: 4.739

Review 4.  Antivitamins B12 -Some Inaugural Milestones.

Authors:  Bernhard Kräutler
Journal:  Chemistry       Date:  2020-11-03       Impact factor: 5.236

  4 in total

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