Literature DB >> 16704345

Radical enzymes in anaerobes.

Wolfgang Buckel1, Bernard T Golding.   

Abstract

This review describes enzymes that contain radicals and/or catalyze reactions with radical intermediates. Because radicals irreversibly react with dioxygen, most of these enzymes occur in anaerobic bacteria and archaea. Exceptions are the families of coenzyme B(12)- and S-adenosylmethionine (SAM)-dependent radical enzymes, of which some members also occur in aerobes. Especially oxygen-sensitive radical enzymes are the glycyl radical enzymes and 2-hydroxyacyl-CoA dehydratases. The latter are activated by an ATP-dependent one-electron transfer and act via a ketyl radical anion mechanism. Related enzymes are the ATP-dependent benzoyl-CoA reductase and the ATP-independent 4-hydroxybenzoyl-CoA reductase. Ketyl radical anions may also be generated by one-electron oxidation as shown by the flavin-adenine-dinucleotide (FAD)- and [4Fe-4S]-containing 4-hydroxybutyryl-CoA dehydratase. Finally, two radical enzymes are discussed, pyruvate:ferredoxin oxidoreductase and methane-forming methyl-CoM reductase, which catalyze their main reaction in two-electron steps, but subsequent electron transfers proceed via radicals.

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Year:  2006        PMID: 16704345     DOI: 10.1146/annurev.micro.60.080805.142216

Source DB:  PubMed          Journal:  Annu Rev Microbiol        ISSN: 0066-4227            Impact factor:   15.500


  46 in total

Review 1.  Autotrophic carbon fixation in archaea.

Authors:  Ivan A Berg; Daniel Kockelkorn; W Hugo Ramos-Vera; Rafael F Say; Jan Zarzycki; Michael Hügler; Birgit E Alber; Georg Fuchs
Journal:  Nat Rev Microbiol       Date:  2010-05-10       Impact factor: 60.633

2.  The key nickel enzyme of methanogenesis catalyses the anaerobic oxidation of methane.

Authors:  Silvan Scheller; Meike Goenrich; Reinhard Boecher; Rudolf K Thauer; Bernhard Jaun
Journal:  Nature       Date:  2010-06-03       Impact factor: 49.962

Review 3.  Energy conservation via electron-transferring flavoprotein in anaerobic bacteria.

Authors:  Gloria Herrmann; Elamparithi Jayamani; Galina Mai; Wolfgang Buckel
Journal:  J Bacteriol       Date:  2007-11-26       Impact factor: 3.490

4.  Kinetics for tautomerizations and dissociations of triglycine radical cations.

Authors:  Chi-Kit Siu; Junfang Zhao; Julia Laskin; Ivan K Chu; Alan C Hopkinson; K W Michael Siu
Journal:  J Am Soc Mass Spectrom       Date:  2009-01-29       Impact factor: 3.109

Review 5.  Rethinking glycolysis: on the biochemical logic of metabolic pathways.

Authors:  Arren Bar-Even; Avi Flamholz; Elad Noor; Ron Milo
Journal:  Nat Chem Biol       Date:  2012-05-17       Impact factor: 15.040

6.  Vitamins and cofactors: highlights of ESBOC 2009.

Authors:  Edward McDonald
Journal:  Nat Chem Biol       Date:  2009-08       Impact factor: 15.040

7.  Using comparative genomics to uncover new kinds of protein-based metabolic organelles in bacteria.

Authors:  Julien Jorda; David Lopez; Nicole M Wheatley; Todd O Yeates
Journal:  Protein Sci       Date:  2013-01-04       Impact factor: 6.725

8.  Converging on a mechanism for choline degradation.

Authors:  Christopher J Thibodeaux; Wilfred A van der Donk
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-14       Impact factor: 11.205

Review 9.  Anaerobic functionalization of unactivated C-H bonds.

Authors:  Squire J Booker
Journal:  Curr Opin Chem Biol       Date:  2009-03-16       Impact factor: 8.822

10.  RamA, a protein required for reductive activation of corrinoid-dependent methylamine methyltransferase reactions in methanogenic archaea.

Authors:  Tsuneo Ferguson; Jitesh A Soares; Tanja Lienard; Gerhard Gottschalk; Joseph A Krzycki
Journal:  J Biol Chem       Date:  2008-11-28       Impact factor: 5.157

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