| Literature DB >> 32669952 |
Jian Wang1, Jinyu Kong2, Zhong Nie1, Diansen Chen1, Jun Qiang1, Wanqin Gao1, Xiaojie Chen3.
Abstract
Background: Circular RNAs (circRNAs) represent a class of broad and diversified endogenous RNAs that regulate gene expressions in eukaryotes. Hsa_circ_006675 has been proven as an important circRNA molecule in nasopharyngeal carcinoma (NPC), however, its function still remains elusive. This study aims to discuss the biofunctions of hsa_circ_0066755 in NPC.Entities:
Keywords: circular RNA, hsa_circ_0066755, nasopharyngeal carcinoma, CNE-1; miR-651, sponge
Mesh:
Substances:
Year: 2020 PMID: 32669952 PMCID: PMC7359393 DOI: 10.7150/ijms.47024
Source DB: PubMed Journal: Int J Med Sci ISSN: 1449-1907 Impact factor: 3.738
Figure 1Plasma and tissue levels of hsa_circ_0066755 in NPC patients and the clinical significance. (A,B) Plasma and (C, D) tissue levels of hsa_circ_0066755 in NPC patients detected by qRT-PCR. (E, F) Plasmic or tissue levels of hsa_circ_0066755 were higher in stage III and IV NPC patients than those in stage I and II patients. The plotted ROC curves of (G) plasma and (H) tissue hsa_circ_0066755 in the diagnosis of NPC. *P < 0.05.
Clinical characteristics of plasmic hsa_circ_0066755 expression in NPC
| Clinicopathological features | Total (n=86) | Low (n=33) | High | χ2 value | |
|---|---|---|---|---|---|
| 0.029 | 0.864 | ||||
| Male | 66 | 25 | 41 | ||
| Female | 20 | 8 | 12 | ||
| 0.969 | 0.325 | ||||
| ≤45 | 37 | 12 | 25 | ||
| >45 | 49 | 21 | 28 | ||
| 5.469 | 0.019 | ||||
| I-II | 41 | 21 | 20 | ||
| III-IV | 45 | 12 | 33 | ||
| 1.625 | 0.202 | ||||
| Nonkeratinizing | 85 | 32 | 53 | ||
| Keratinizing | 1 | 1 | 0 | ||
| 1.903 | 0.168 | ||||
| Yes | 24 | 12 | 12 | ||
| No | 62 | 21 | 41 |
Diagnostic accuracy of plasma and tissue hsa_circ_0066755 and MRI in confirming NPC
| Groups | Total size | Missed diagnosis (%) | Misdiagnosis (%) | Diagnostic accuracy (%) |
|---|---|---|---|---|
| Plasmic | 24 | 4 (16.67) | 0 | 20 (83.33) |
| Tissue | 16 | 2 (12.5) | 0 | 14 (87.5) |
| MRI | 24 | 0 | 1 (4.17) | 23 (95.83) |
Figure 2Up-regulation of hsa_circ_0066755 promoted the growth, proliferation, invasion and migration of CNE-1 cells. (A) Basal levels of hsa_circ_0066755 in HEK-293a, CNE-1 and CNE-2 cell lines. (B) The expression of total hsa_circ_0066755 in CNE-1 cells following infection. (C, D) Cell viability assessed by CCK-8 assay, and cells morphology and growth condition was imaged at 72h following infection (×200). (E) Colony formation assay. (F) Wound healing migration assay. Migrated cells were counted at 48 h after transfection. (G) Transwell invasion assay. Migrated or invaded cells were counted at 48 h following transfection with or without Matrigel. (H) Xenograft experiment. Tumors were weighed at the endpoint of the experiment. *P < 0.05, **P < 0.01 vs. PLCDH-vector group.
Figure 3Hsa_circ_0066755 silencing inhibited the proliferation and invasion of CNE-1 cells. (A) The expression of hsa_circ_0066755 in CNE-1 cells following transfection with the si-hsa_circ_0066755 vector. (B) Cell viability assessed by CCK-8 assay. (C) Morphological changes of CNE-1 cells after infected with the Si- circ_0066755 shRNA vector at 72h. (D) Colony formation assay. (E) Wound healing migration assay. Migrated cells were counted at 48 h after silencing. (F) Transwell invasion assay. Migrated or invaded cells were counted at 48 h after transfection with or without Matrigel. (G) Expression of apoptosis related proteins detected by immunoblotting. *P < 0.05, **P < 0.01 vs. Si-control group.
Figure 4Hsa_circ_0066755 acted as the miR-651 sponge to regulate NPC progression. (A) Distribution of hsa_circ_0066755 in nuclear and cytoplasmic fractions of CNE-1 cells. (B) Hsa_circ_0066755 silencing could increase miR-651 expression. (C, D) Luciferase assay of HEK-293a and CNE-1 cells co-transfected with the miR-651 mimic and luciferase reporter containing hsa_circ_0066755-wild-type sequences (cirRNA-wt) or -mutant sequences (cirRNA-mut). (E, F) Cell viability of CNE-1 cells assessed by CCK-8 assay. (G, H) Colony formation assay. (I, J) Wound healing migration assay. (K, L) Transwell invasion assay. *P < 0.05, **P < 0.01.
The predicted miRNAs that may target with hsa_circ_0066755
| Predicted miRNAs | Binding site with | Context+ score percentile |
|---|---|---|
| 5'…UCCACCC…3' | 96 | |
| 5'…UAGGUCA…3' | 98 | |
| 5'…AAUAGGU…3' | 97 | |
| 5'…GACACCA…3' | 98 | |
| 5'…CAUUACA…3' | NA | |
| 5'…ACCCCC…3' | 92 | |
| 5'…GAAAGU…3' | 87 | |
| 5'…AACGAC…3' | 93 | |
| 5'…UUUACU…3' | 90 | |
| 5'…UAAGAGU…3' | 99 | |
| 5'…UACCUU…3' | 87 | |
| 5'…UCAUCAA…3' | 97 | |
| 5'…UGGAACA…3' | 94 | |
| 5'…UAGGAUU…3' | 99 | |
| 5'…AUUACC…3' | 89 | |
| 5'…GGUUCA…3' | 92 | |
| 5'…GAUGAC…3' | 89 |