Literature DB >> 32652254

Monitoring environmental contamination caused by SARS-CoV-2 in a healthcare facility by using adenosine triphosphate testing.

Yu-Mi Lee1, Dong Youn Kim1, Ki-Ho Park1, Mi Suk Lee2, Young Jin Kim3.   

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Year:  2020        PMID: 32652254      PMCID: PMC7342043          DOI: 10.1016/j.ajic.2020.06.207

Source DB:  PubMed          Journal:  Am J Infect Control        ISSN: 0196-6553            Impact factor:   2.918


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We read with great interest the recent article by Wu et al describing a study of environmental contamination by SARS-CoV-2. The authors reported that the touchable surfaces were heavily contaminated in the designated hospital for 2019 novel coronavirus diseases (COVID-19). Environmental management in healthcare facilities is essential for preventing hospital outbreaks of SARS-CoV-2 during the 2019 novel coronavirus disease (COVID-19) pandemic. Assessment of environmental contamination with Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) by real-time reverse transcriptase-polymerase chain reaction (RT-PCR) or culture-based method is not cost effective and time consuming. Adenosine triphosphate (ATP) monitoring is utilized as a surrogate marker for hygiene in hospitals. The detection of ATP indicates a biologic reaction that produces light such as organic matter, including microbes, feces, dirt. ATP is required during viral lifecycles, especially during viral replication. However, the correlation between viral concentration and ATP measurement has not been well documented. The objective of this study was to determine the contamination degree of an isolation room of a patient with COVID-19 using additional ATP monitoring, before and after cleaning, to determine the proper approach to prevent the hospital spread of SARS-CoV-2. An adult patient with COVID-19 was treated in a negative-pressure isolation room in March 2020 at our tertiary care hospital in South Korea. Surface samples in the isolation room and bathroom inside the isolation room were collected using an eNAT sampling kit (Copan, Brescia, Italy) at 25 sites for real-time RT-PCR analysis for SARS-CoV-2. The sampling sites were divided into routine disinfection sites and sites that were not disinfected. The samples at routine disinfection sites were collected before and after daily cleaning measures. Samples from nondisinfected sites were collected once before the routine cleaning measures. The routine cleaning of the room was done once daily with 0.2% sodium hypochlorite (Clorox). The samples were taken on the fifth hospital day. ATP monitoring was performed immediately before sampling for RT-PCR of SARS-CoV-2. The real-time RT-PCR was performed using a STANDARD M nCOV Real-Time Detection Kit (SD biosensor, Osong, Korea) following the manufacturer's instructions with an ABI 7,500 fast instrument (Applied Biosystems, CA). The target genes were RdRp and E genes. The amplification curve of each gene was checked and the Ct values were recorded regardless of cutoff value (Ct ≤36), as suggested by the manufacturer. ATP bioluminescence was measured in relative light units (RLUs) using a 3 M Clean-Trace Surface ATP meter (3 M, St. Paul, MN) following the manufacturer's protocol. The results were represented as RLUs. The threshold value for the ATP measurement was 100 RLU/100 cm2. A 25-year-old male patient was admitted to the isolation room for COVID-19 on the second day of symptom onset, and the samples were collected on the seventh day of symptom onset. The patient had a slight dry cough without fever on the date of sampling. The patient did not wear any type of mask. The severity of COVID-19 was mild. The patient had high viral shedding of SARS-CoV-2 on the sampling day, with cycle threshold values of 29.94, 29.19, and 21.88 in the oropharynx, nasopharynx, and sputum, respectively. The RT-PCR of all environmental samples showed negative results. The results of ATP monitoring before and after cleaning are shown in Table 1 . The isolation room floor, mattress, bathroom sink, and pillow showed high ATP measurements, whereas the toilet seat cover, shower handle, and ventilator hole in the isolation room revealed negative results for ATP monitoring. The median ATP measurement decreased by 47% after cleaning [before cleaning: 328 (131-794) RLU vs. after cleaning: 157 (113-179) RLU]. The difference between the ATP measurement results before and after cleaning was significant by the paired t test analysis (P = .03).
Table 1

Results of ATP monitoring and RT-PCR according to environmental sampling sites before and after cleaning

SitesBefore cleaning
After cleaning
ATP monitoringRelative light unitRT-PCRATP monitoringRelative light unitRT-PCR
Routine disinfection sites
 FloorPositive3,896NegativePositive1,062Negative
 Light switch at wallPositive388NegativePositive214Negative
 Bed railPositive415NegativePositive120Negative
 Light switches at bedPositive633NegativePositive123Negative
 Call bell at bedPositive267NegativePositive179Negative
 Bedside tablePositive862NegativeNegative81Negative
 Telephone at bedside tablePositive142NegativePositive168Negative
 Bed mattressPositive2,778NegativePositive169Negative
 Medical fluid hangerPositive107NegativePositive153Negative
 Door handle of refrigeratorPositive157NegativePositive160Negative
 Remote controlPositive161NegativeNegative84Negative
 Patient's monitor screenPositive134NegativePositive117Negative
 Door handle of bathroomPositive392NegativePositive179Negative
 Light switch at bathroomPositive122NegativePositive102Negative
 Toilet seat coverNegative79NegativePositive116Negative
 Shower handle at bathroomNegative76NegativePositive172Negative
 Water tap at bathroomPositive771NegativeNegative98Negative
 Sink at bathroomPositive1,159NegativePositive197Negative
Non-disinfected sites
 CellphonePositive267Negative---
 Television screenPositive163Negative---
 Bed headboardPositive100Negative---
 Blood pressure cuffPositive217Negative---
 PillowPositive8,811Negative---
 Ventilator hole at isolation roomNegative99Negative---
 Ventilator hole at bathroomPositive414Negative---

ATP, adenosine triphosphate; RT-PCR, real-time reverse transcriptase-polymerase chain reaction.

Results of ATP monitoring and RT-PCR according to environmental sampling sites before and after cleaning ATP, adenosine triphosphate; RT-PCR, real-time reverse transcriptase-polymerase chain reaction. Even though previous studied have reported extensive environmental contamination of the healthcare facilities housing COVID-19 patients, by SARS-CoV-2, SARS-CoV-2 was not detected in any surface sample in our study. In line with our results, Wang et al. also failed to detect SARS-CoV-2 RNA among various environmental surface samples. These results suggested that environmental contamination may not always happen at the level that can be detected by RT-PCR when the patient has only a mild cough. In our study, post cleaning ATP value was significantly decreased. These results indicate that routine cleaning may be enough to manage the hospital environment for preventing the outbreak of COVID-19. There were limited studies regarding association between viral contamination and ATP measurement. Laura et al. reported that ATP measurement does not represent the viral load on surfaces. These results suggest that the ATP assay merely has a role in the assessment of surface contamination. In conclusion, routine cleaning effectively controls environmental contamination in a COVID-19 isolation room, according to ATP monitoring. The ATP system could be used to monitor environmental cleanliness, and its usefulness as a SARS-CoV-2 contamination screening tool should be evaluated in future studies.
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2.  Air, Surface Environmental, and Personal Protective Equipment Contamination by Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) From a Symptomatic Patient.

Authors:  Sean Wei Xiang Ong; Yian Kim Tan; Po Ying Chia; Tau Hong Lee; Oon Tek Ng; Michelle Su Yen Wong; Kalisvar Marimuthu
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3.  Adenosine tri-phosphate (ATP)-based cleaning monitoring in health care: how rapidly does environmental ATP deteriorate?

Authors:  M J Alfa; N Olson; B-L Murray
Journal:  J Hosp Infect       Date:  2015-02-26       Impact factor: 3.926

4.  Visualization and measurement of ATP levels in living cells replicating hepatitis C virus genome RNA.

Authors:  Tomomi Ando; Hiromi Imamura; Ryosuke Suzuki; Hideki Aizaki; Toshiki Watanabe; Takaji Wakita; Tetsuro Suzuki
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5.  SARS-CoV-2 RNA detection of hospital isolation wards hygiene monitoring during the Coronavirus Disease 2019 outbreak in a Chinese hospital.

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6.  Environmental contamination by SARS-CoV-2 in a designated hospital for coronavirus disease 2019.

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Review 7.  Effectiveness of ATP bioluminescence to assess hospital cleaning: a review.

Authors:  N Nante; E Ceriale; G Messina; D Lenzi; P Manzi
Journal:  J Prev Med Hyg       Date:  2017-06

Review 8.  Guidelines for Laboratory Diagnosis of Coronavirus Disease 2019 (COVID-19) in Korea.

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