| Literature DB >> 32237288 |
Ki Ho Hong1, Sang Won Lee2, Taek Soo Kim3, Hee Jae Huh4, Jaehyeon Lee5, So Yeon Kim6, Jae Sun Park2, Gab Jeong Kim2, Heungsup Sung7, Kyoung Ho Roh8, Jae Seok Kim9, Hyun Soo Kim9, Seung Tae Lee10, Moon Woo Seong3, Namhee Ryoo11, Hyukmin Lee10, Kye Chul Kwon12, Cheon Kwon Yoo2.
Abstract
The outbreak of coronavirus disease 2019 (COVID-19), which began in December 2019, is still ongoing in Korea, with >9,000 confirmed cases as of March 25, 2020. COVID-19 is a severe acute respiratory syndrome Coronavirus 2 (SARS-CoV-2) infection, and real-time reverse transcription-PCR is currently the most reliable diagnostic method for COVID-19 around the world. Korean Society for Laboratory Medicine and the Korea Centers for Disease Prevention and Control propose guidelines for diagnosing COVID-19 in clinical laboratories in Korea. These guidelines are based on other related domestic and international guidelines, as well as expert opinions and include the selection of test subjects, selection of specimens, diagnostic methods, interpretation of test results, and biosafety. © The Korean Society for Laboratory Medicine.Entities:
Keywords: COVID-19; Guidelines; Korea; Laboratory diagnosis; Outbreak
Mesh:
Substances:
Year: 2020 PMID: 32237288 PMCID: PMC7169629 DOI: 10.3343/alm.2020.40.5.351
Source DB: PubMed Journal: Ann Lab Med ISSN: 2234-3806 Impact factor: 3.464
Target genes of various real-time RT-PCR protocols (including the reagents approved for emergency use in Korea as of March 13, 2020) [5–9]
| Authors, manufacturers | Target gene | Reference |
|---|---|---|
| Corman, | [ | |
| Chu, | [ | |
| Ministry of Public Health, Thailand | [ | |
| Institut Pasteur | [ | |
| Centers for Disease Control and Prevention (USA) | [ | |
| PowerCheck 2019-nCoV | ||
| Allplex 2019-nCoV | ||
| nCoV Real-Time Detection | ||
| DiaPlexQ 2019-nCoV | ||
| Real-Q 2019-nCoV |
authorized for emergency use in Korea, as of Mar 13, 2020;
The correct positions of the targets were not provided by the manufacturer.
Specimens for COVID-19 testing [4, 18, 19]
| Types of specimens | Collection devices | Transport conditions | Storage conditions | Comments |
|---|---|---|---|---|
| Upper respiratory tract specimens: NP swab | Dacron or flocked swabs in VTM | 4°C | Within 5 days: 4°C | |
| Lower respiratory tract specimen: sputum | Sterile container | 4°C | Within 48 hr: 4°C | |
| Lower respiratory tract specimen: bronchial washing | Sterile container | 4°C | Within 48 hr: 4°C | Pathogens might be diluted; however, the specimen can be subjected to diagnostic testing |
| Lower respiratory tract specimens: tracheal aspirate and transtracheal aspirate | Sterile container | 4°C | Within 48 hr: 4°C | |
| Lower respiratory tract specimen: lung biopsy | Sterile container with saline | 4°C | Within 48 hr: 4°C | |
| Serum | Serum separation test tube (SST): adults and children, 3–5 mL; infants, 1 mL | 4°C | Within 5 days: 4°C | For serological tests, a pair of specimens is collected |
Specimens recommended by the kit and approved by the Korea Ministry of Food and Drug Safety (MFDS) on March 13, 2020;
Specimens requiring advance consultation between the referrer and the laboratory.
Abbreviations: VTM, viral transport medium; NP, nasopharyngeal; OP, oropharyngeal; BSC, biosafety cabinet.
Infection prevention and control for aerosol-producing procedures [28–30]
- Sputum collection, tracheal aspiration, bronchoscopy, continuous positive airway pressure therapy, removal of tracheal intubation, etc. - Patient care should be performed with minimal medical staff. -The following PPE should be used by personnel: N95 or KF94 mask or equivalent respirators, protective gown, disposable gloves, and eye protection (goggles or face shield). - Personnel should adhere to the facility’s hand hygiene policy before and after patient contact, as well as after removing PPE. -A single, negative pressure room with >12 air changes/hr is recommended for patient care. When this cannot be made available, a single room with natural ventilation and an average ventilation rate of 160 L/sec/patient can be used. -After using the single room, it should be disinfected according to the defined procedure and left vacant for a period of approximately 30 min (considering an air circulation rate of 12 air changes/hr). - Entry to/exit from the room should be minimized during the procedure. |
Abbreviation: PPE, personal protective equipment.