| Literature DB >> 32620920 |
Taoufik Nedjadi1, Hicham Benabdelkamal2, Nada Albarakati3, Afshan Masood2, Ahmed Al-Sayyad4, Assim A Alfadda2, Ibrahim O Alanazi5, Adel Al-Ammari6, Jaudah Al-Maghrabi7.
Abstract
The identification of clinically-relevant early diagnostic and prognostic protein biomarkers is essential to maximize therapeutic efficacy and prevent cancer progression. The aim of the current study is to determine whether aberrant plasma protein profile can be applied as a surrogate tool for early diagnosis of bladder carcinoma. Plasma samples from patients with low grade non-muscle invasive bladder cancer and healthy controls were analyzed using combined 2D-DIGE and mass-spectrometry to identify differentially expressed proteins. Validation was performed using western blotting analysis in an independent cohort of cancer patients and controls. Fifteen differentially-expressed proteins were identified of which 12 were significantly up-regulated and three were significantly down-regulated in tumors compared to controls. The Ingenuity Pathways Analysis revealed functional connection between the differentially-expressed proteins and immunological disease, inflammatory disease and cancer mediated through chemokine and cytokine signaling pathway and NF-kB transcription factor. Among the three validated proteins, haptoglobin was able to distinguish between patients with low grade bladder cancer and the controls with high sensitivity and specificity (AUC > 0.87). In conclusion, several biomarker proteins were identified in bladder cancer. Haptoglobin is a potential candidate that merit further investigation to validate its usefulness and functional significance as potential biomarkers for early detection of bladder cancer.Entities:
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Year: 2020 PMID: 32620920 PMCID: PMC7335182 DOI: 10.1038/s41598-020-67929-z
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Characteristics of low-grade cancer vs. healthy controls.
| Characteristics | Cancer patients | Healthy controls |
|---|---|---|
| Discovery | 4 | 4 |
| Validation | 10 | 18 |
| Age (mean/range) | 62/(50–73) | 51/(43–60) |
| Weight (mean/range) | 68/(55–80) | 74/(59–88) |
| Male | 80% | 87% |
| Female | 20% | 13% |
| Cancer grade low | 100% | N/A |
| pTa | 33.3% | N/A |
| pT1 | 67.7% | N/A |
Figure 2The proteome maps obtained from two-dimensional proteome map analysis of plasma samples from the discovery bladder cancer patients/ healthy control cohorts. (A) A representative overlap 2D-DIGE image. The differentially expressed spots are denoted by arrows. (B) Images for low grade tumor, healthy control and internal standard were labeled with Cy3, Cy5 and Cy2 dyes respectively. (C) Panel depicted an example of protein spot 755 (Integrator complex subunit 10) abundance by 2D and 3D overexpressed in tumor compared to control.
List of identified differentially expressed proteins in low grade bladder cancer serum samples identified using 2D DIGE and MALDI-TOF-MS analysis.
| Spot no. | Accession no. | Protein name | Pi | Cov% | MW | p-value (ANOVA) | Fold change | UP/down regulated | |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 552 | P02790 | Hemopexin | 6.55 | 33 | 52,385 | 0.038 | 1.7 | UP |
| 2 | 993 | P00738 | Haptoglobin | 6.3 | 41 | 45,861 | 0.038 | 4.8 | UP |
| 3 | 748 | Q8IXV7 | Kelchdomain-containing protein 8B | 8.61 | 28 | 38,165 | 0.039 | 3.6 | UP |
| 4 | 754 | P00738 | Haptoglobin | 6.3 | 19 | 65,861 | 0.038 | 4.3 | UP |
| 5 | 836 | Q9ULT8E3 ubiquitin-protein ligase HECTD1 | 5.29 | 8 | 292,379 | 0.044 | 1.7 | UP | |
| 6 | 766 | Q9Y6K1DNA (cytosine-5)-methyltransferase3A | 619 | 17 | 103,390 | 0.047 | 2.8 | UP | |
| 7 | 756 | P00738 | Haptoglobin | 6.3 | 28 | 4,586 | 0.050 | 3.5 | UP |
| 8 | 404 | P00736 | Complement C1r subcomponent | 5.82 | 20 | 81,606 | 0.011 | 2.3 | UP |
| 9 | 291 | P00450 | Ceruloplasmin | 5.44 | 43 | 122,983 | 0.008 | 2.3 | Down |
| 10 | 996 | Q9Y5U9 | Immediate early response 3-interacting protein1 | 7.96 | 19 | 9,020 | 0.012 | 3.9 | UP |
| 11 | 304 | P01024 | Complement C3 | 6.39 | 24 | 88,569 | 0.004 | 2.1 | Down |
| 12 | 755 | Q9NVR2 | Integrator complex subunit 10 | 724 | 25 | 83,209 | 0.005 | 3 | UP |
| 13 | 790 | P00738 | Haptoglobin | 6.3 | 31 | 4,586 | 0.043 | 3.6 | UP |
| 14 | 308 | P13671 | Complement component C6 | 6.39 | 27 | 108,367 | 0.001 | 2.3 | Down |
| 15 | 760 | P00738 | Haptoglobin | 6.3 | 33 | 45,861 | 0.057 | 3.7 | UP |
Figure 3Validation of selected differentially expressed proteins using independent validation cohorts. Immunoblot analysis using of complement component C6 proteins (A), ceruplasmin (B) and haptoglobin (C). Equal protein loading was confirmed with Coomassie staining of plasma samples. Densitometry analysis of each protein normalized to β-actin represents the relative protein expression values. Error bars represent standard error of the mean. *p 0.05, **p 0.01, unpaired t-test. n = three replicates of three independent experiments for each group.
Figure 4Protein interaction network and function. (A) Ingenuity Pathway Analysis (IPA) showing the major protein interaction network of identified proteins. Direct interactions are represented as solid lines, whereas indirect interactions appear as dotted lines. (B) A representative pie charts indicating the cellular localization (i), role of the identified proteins in the biological and physiological systems (ii) and the molecular functions of differentially identified proteins (iii). A total of six biological processes with their respective cellular locations were categorized.