| Literature DB >> 28423673 |
In Woong Han1,2, Jin-Young Jang2, Wooil Kwon2, Taesung Park3, Yongkang Kim3, Kyoung Bun Lee4, Sun-Whe Kim2.
Abstract
BACKGROUND AND AIMS: Bile duct cancer is one of the lethal cancers, presenting difficulties in early diagnosis and limited treatment modalities. Despite current advances in biomarker research, most studies have been performed in Western populations. Therefore, the purpose of this study was to determine a prognostic marker for bile duct cancer, especially in Korean patients, whose incidence of bile duct cancer is high.Entities:
Keywords: bile duct; biomarker; cancer; ceruloplasmin; cholangiocarcinoma
Mesh:
Substances:
Year: 2017 PMID: 28423673 PMCID: PMC5438709 DOI: 10.18632/oncotarget.15995
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Demographics and pathologic data
| Variables | N=79 |
|---|---|
| Age (years, mean ± SD) | 65.4±7.7 |
| Gender (male: female) | 51:28 |
| Location (Extrahepatic: Intrahepatic) | 63 (79.7%): 16 (20.3%) |
| Location of extrahepatic bile duct cancer (Proximal: mid- to- distal) | 28 (44.4%): 35 (55.6%) |
| Operative methods (Hepatectomy with BDR: BDR: PD) | 30 (38.0%): 19 (24.1%): 30 (38.0%) |
| Curative resection | 73 (92.4%) |
| Recurrence | 37 (50.7%)(of 73 curative resection) |
| Follow-up duration (months, median, range) | 33.3 (0.8-76.2) |
| Gross type (papillary: nodular: flat) | 14 (17.7%): 41 (51.9%): 24 (30.4%) |
| Histologic grade (WD: MD: PD) | 12 (15.2%): 51 (64.6%): 10 (12.7%)(of 73 patients) |
| Depth of invasion (confined to bile duct: beyond bile duct) | 14 (17.7%): 65 (82.3%) |
| Lymph node metastasis | 31 (39.2%)(of 71 patients) |
| Perineural invasion | 56 (70.9%) |
Abbreviations: BDR: bile duct resection, PD: pancreaticoduodenectomy, WD: well-differentiated, MD: moderate- differentiated, PD: poorly-differentiated.
Top 50 genes with positive coefficient toward advanced T stage, N stage, and perineural invasion
| log2. ratio ofcancer | T stagep-value | log2ratioof T stage | N stagep-value | log2ratio ofN stage | PNIp-value | log2ratio ofPNI | Multipleregressionp-value | Adjustedp-value | Gene symbol |
|---|---|---|---|---|---|---|---|---|---|
| 1.405649235 | 0.005021 | 0.669221179 | 0.049282 | 0.414807777 | 0.0066929 | 0.577734589 | 8.67E-12 | 1.85E-09 | CELSR1 |
| 0.902487966 | 0.017299 | 0.408004864 | 0.048754 | 0.274492969 | 0.0062699 | 0.388747711 | 8.01E-10 | 5.33E-08 | PLXNA1 |
| 1.336755747 | 0.005524 | 0.878416145 | 0.010444 | 0.71439579 | 0.0018927 | 0.883976089 | 6.28E-08 | 1.46E-06 | AHNAK2 |
| 0.774103937 | 0.000954 | 0.687681207 | 0.008804 | 0.45790676 | 0.0019398 | 0.569426772 | 5.74E-06 | 4.81E-05 | LAMA5 |
| 0.568306702 | 0.015232 | 0.381576062 | 0.006886 | 0.351554572 | 0.0458663 | 0.278862871 | 7.42E-06 | 5.92E-05 | RNF157-AS1 |
| 1.230802084 | 0.000229 | 1.183765995 | 0.005831 | 0.630328305 | 0.0271156 | 0.588247469 | 1.04E-05 | 7.72E-05 | LOC728643 |
| 1.168560622 | 0.0305 | 0.781214914 | 0.00944 | 0.751484198 | 0.0016675 | 0.976805933 | 2.13E-05 | 0.000136725 | TRIM29 |
| 1.593130487 | 0.042005 | 1.075298616 | 0.044852 | 0.915541975 | 0.0030054 | 1.328602148 | 4.05E-05 | 0.000229513 | --- |
| 1.755681238 | 0.000359 | 1.952839198 | 0.006969 | 1.159846203 | 0.0261894 | 1.083681984 | 4.41E-05 | 0.000246188 | CP |
| 1.256035134 | 0.000343 | 1.382233559 | 0.035821 | 0.723628435 | 0.0001428 | 1.271430559 | 4.65E-05 | 0.000256884 | CACNG4 |
| 1.035723885 | 0.038296 | 0.680393235 | 0.000894 | 0.891679109 | 0.0103758 | 0.719665669 | 6.05E-05 | 0.000319024 | FOXJ1 |
| 1.055140967 | 0.000506 | 1.21563373 | 0.000779 | 0.910845838 | 0.00771 | 0.80855569 | 0.000163 | 0.000718317 | ANXA8 |
| 0.38719036 | 0.003896 | 0.381130034 | 0.046294 | 0.235723632 | 0.0367647 | 0.267271458 | 0.000187 | 0.000805512 | --- |
| 1.422747031 | 0.001163 | 1.680970054 | 0.011585 | 1.149656434 | 0.0004231 | 1.636415885 | 0.000259 | 0.001056886 | SCEL |
| 0.741694744 | 0.041854 | 0.500599655 | 0.017604 | 0.472999653 | 0.0090105 | 0.526894352 | 0.000303 | 0.001201835 | IL20RB |
| 1.048336388 | 0.000656 | 1.256426426 | 0.00088 | 0.948583195 | 0.0102444 | 0.816245506 | 0.000367 | 0.001407568 | ANXA8L1 |
| 0.439815207 | 0.007863 | 0.420094066 | 0.015973 | 0.298972856 | 0.0468603 | 0.276542029 | 0.000405 | 0.001524813 | PACSIN3 |
| 0.644644964 | 0.031368 | 0.510770319 | 0.011303 | 0.457911463 | 0.0238407 | 0.477635525 | 0.000432 | 0.001607237 | NUP210 |
| 0.41460036 | 0.03709 | 0.311652312 | 0.016663 | 0.291643291 | 0.000777 | 0.41712347 | 0.000651 | 0.002251733 | RARG |
| 0.459884319 | 0.004722 | 0.493286574 | 0.045051 | 0.27407048 | 0.0322201 | 0.323656785 | 0.000967 | 0.003135081 | MTSS1L |
| 0.752843756 | 0.001219 | 0.926599211 | 0.00119 | 0.702989327 | 0.0191047 | 0.575784542 | 0.000974 | 0.003154055 | ANXA8L2 |
| 0.326934803 | 0.006896 | 0.339485505 | 0.023013 | 0.24777875 | 0.0025399 | 0.325922534 | 0.001317 | 0.004059408 | KCTD15 |
| 0.327674175 | 0.021866 | 0.313482341 | 0.019959 | 0.25034948 | 0.036247 | 0.266040443 | 0.001513 | 0.004559996 | ZNF550 |
| 0.638509872 | 0.01561 | 0.628376088 | 0.027736 | 0.496854056 | 0.0167853 | 0.527506439 | 0.001932 | 0.005596862 | 03-Sep |
| 0.641215401 | 0.002851 | 0.801735895 | 0.018654 | 0.562292769 | 0.0076319 | 0.66523785 | 0.002029 | 0.005824709 | IGFBP3 |
| 0.499649263 | 0.042891 | 0.470272503 | 0.016633 | 0.459860135 | 0.0013724 | 0.619993877 | 0.005756 | 0.014050979 | NMU |
| 0.401188962 | 0.03306 | 0.405520149 | 0.026384 | 0.332817538 | 0.0409198 | 0.34779977 | 0.00705 | 0.016707122 | RPGRIP1L |
| 1.038620022 | 0.001477 | 1.622430348 | 0.01432 | 1.04114733 | 0.0001852 | 1.62939924 | 0.009159 | 0.020847277 | MUC16 |
| 0.565775908 | 0.01136 | 0.736079957 | 0.019033 | 0.5676243 | 0.0199131 | 0.594558424 | 0.012178 | 0.026551104 | --- |
| 0.375493033 | 0.042879 | 0.410540932 | 0.031223 | 0.373539325 | 0.001184 | 0.554925038 | 0.017506 | 0.036142137 | SFTA2 |
| 0.375493033 | 0.042879 | 0.410540932 | 0.031223 | 0.373539325 | 0.001184 | 0.554925038 | 0.017506 | 0.036142137 | SFTA2 |
| 0.187599817 | 0.024383 | 0.226129552 | 0.024041 | 0.187735793 | 0.0367099 | 0.179514001 | 0.019273 | 0.039199952 | --- |
| 0.344763407 | 0.048564 | 0.379079767 | 0.027571 | 0.359760333 | 0.000962 | 0.530485462 | 0.021143 | 0.042354375 | SFTA2 |
| 0.344763407 | 0.048564 | 0.379079767 | 0.027571 | 0.359760333 | 0.000962 | 0.530485462 | 0.021143 | 0.042354375 | SFTA2 |
| 0.276170322 | 0.005814 | 0.433065399 | 0.008952 | 0.325178256 | 0.02379 | 0.303523881 | 0.02891 | 0.055235829 | OBSL1 |
| 0.311893948 | 0.016383 | 0.456822732 | 0.02489 | 0.351506827 | 6.82E-05 | 0.62551085 | 0.029778 | 0.056617243 | DUSP7 |
| 0.29107782 | 7.23E-05 | 0.680455719 | 0.031919 | 0.356012678 | 0.0002128 | 0.580257197 | 0.034151 | 0.063494817 | SLC25A12 |
| 0.763158464 | 0.021464 | 1.089699767 | 0.000956 | 1.272277802 | 0.0286497 | 0.863378185 | 0.034747 | 0.064421874 | CYP24A1 |
| 0.463353083 | 0.000208 | 1.071169232 | 0.002294 | 0.763081908 | 0.0003075 | 0.938569956 | 0.037331 | 0.068426105 | PLAG1 |
| 0.235225211 | 0.006514 | 0.412864124 | 0.004589 | 0.359195411 | 0.0184164 | 0.333983417 | 0.037393 | 0.068520091 | TBL1X |
| 0.415837064 | 0.020375 | 0.618452648 | 0.003429 | 0.642991749 | 0.0031283 | 0.661698671 | 0.038076 | 0.069551285 | TP63 |
| 0.36489978 | 3.79E-05 | 0.952535143 | 0.037331 | 0.445880795 | 0.000191 | 0.781545771 | 0.04198 | 0.075557211 | PTPRU |
| 0.221020043 | 0.001706 | 0.490176098 | 0.007407 | 0.367678885 | 0.0031479 | 0.422636582 | 0.064293 | 0.108164516 | TMEM194B |
| 0.211173621 | 4.11E-05 | 0.598084608 | 0.007149 | 0.316272465 | 0.0025179 | 0.417098103 | 0.067198 | 0.112310859 | ZNF772 |
| 0.244788935 | 0.007511 | 0.460172837 | 0.049158 | 0.291772733 | 0.0001663 | 0.540728636 | 0.068464 | 0.114089313 | CYP27C1 |
| 0.196298462 | 0.046793 | 0.290292197 | 0.034977 | 0.247751009 | 0.0459685 | 0.264254519 | 0.073753 | 0.121551209 | ZNF211 |
| 0.189809559 | 2.48E-06 | 0.65798624 | 0.037054 | 0.257415442 | 0.000286 | 0.467404599 | 0.092093 | 0.146412737 | SRGAP2B |
| 0.46529506 | 0.013098 | 0.919444033 | 0.001183 | 0.98387549 | 0.0054371 | 0.850979956 | 0.10161 | 0.159071083 | DSC3 |
| 0.336275552 | 0.048061 | 0.513851773 | 0.02283 | 0.482223223 | 0.0287236 | 0.459517938 | 0.111838 | 0.172326235 | KRT4 |
| 0.432728625 | 0.043834 | 0.730488208 | 0.015057 | 0.717167303 | 0.0035367 | 0.883170907 | 0.116773 | 0.178647079 | TRPV4 |
Figure 1Diagram of positive coefficient of 29 genes with cancer to normal bile duct log2ratio >0, adjusted p-value <0.05
Top 3 genes with positive coefficient >1, toward advanced T stage, N stage, and perineural invasion after multiple linear regression
| log2-ratio ofcancer | T stagep-value | log2-ratioof T stage | N stagep-value | log2-ratioof N stage | PNIp-value | log2-ratio ofPNI | Multipleegressionp-value | Adjustedp-value | Gene symbol |
|---|---|---|---|---|---|---|---|---|---|
| 1.755681 | 0.000359 | 1.952839 | 0.006969 | 1.159846 | 0.026189 | 1.083682 | 4.41E-05 | 0.000246 | CP |
| 1.422747 | 0.001163 | 1.68097 | 0.011585 | 1.149656 | 0.000423 | 1.636416 | 0.000259 | 0.001057 | SCEL |
| 1.03862 | 0.001477 | 1.62243 | 0.01432 | 1.041147 | 0.000185 | 1.629399 | 0.009159 | 0.020847 | MUC16 |
Figure 2Immunohistochemical examination of bile duct cancer tissue
(A) normal bile duct, no expression, x100 (B) tumor tissue, strong expression, x400
Clinical characteristics according to ceruloplasmin expression
| No or weak ceruloplasminexpression (n=75) | Strong ceruloplasminexpression(n=4) | p-value | |
|---|---|---|---|
| Tumor location | 0577 | ||
| Intrahepatic bile duct | 59 (78.7%) | 4 (100%) | |
| Extrahepatic bile duct | 16 (21.3%) | 0 | |
| T stage | >0.999 | ||
| Confined to bile duct | 14 (18.7%) | 0 | |
| Beyond bile duct | 61 (81.3%) | 4 (100%) | |
| N stage | 0.627 | ||
| N (−) | 37 (55.2%) | 3 (75.0%) | |
| N (+) | 30 (44.8%) | 1 (25.0%) | |
| Perineural invasion | 0.316 | ||
| Negative | 23 (30.7%) | 0 | |
| Positive | 52 (69.3%) | 4 (100%) | |
| Curative resection | >0.999 | ||
| Yes | 69 (92.0%) | 4 (100%) | |
| No | 6 (8.0%) | 0 |
Figure 3Patients with strong ceruloplasmin expression had shorter median overall survival than those with no or weak overexpression