Literature DB >> 34375293

Self-Ensembling Co-Training Framework for Semi-Supervised COVID-19 CT Segmentation.

Caizi Li, Li Dong, Qi Dou, Fan Lin, Kebao Zhang, Zuxin Feng, Weixin Si, Xuesong Deng, Zhe Deng, Pheng-Ann Heng.   

Abstract

The coronavirus disease 2019 (COVID-19) has become a severe worldwide health emergency and is spreading at a rapid rate. Segmentation of COVID lesions from computed tomography (CT) scans is of great importance for supervising disease progression and further clinical treatment. As labeling COVID-19 CT scans is labor-intensive and time-consuming, it is essential to develop a segmentation method based on limited labeled data to conduct this task. In this paper, we propose a self-ensembled co-training framework, which is trained by limited labeled data and large-scale unlabeled data, to automatically extract COVID lesions from CT scans. Specifically, to enrich the diversity of unsupervised information, we build a co-training framework consisting of two collaborative models, in which the two models teach each other during training by using their respective predicted pseudo-labels of unlabeled data. Moreover, to alleviate the adverse impacts of noisy pseudo-labels for each model, we propose a self-ensembling strategy to perform consistency regularization for the up-to-date predictions of unlabeled data, in which the predictions of unlabeled data are gradually ensembled via moving average at the end of every training epoch. We evaluate our framework on a COVID-19 dataset containing 103 CT scans. Experimental results show that our proposed method achieves better performance in the case of only 4 labeled CT scans compared to the state-of-the-art semi-supervised segmentation networks.

Entities:  

Mesh:

Year:  2021        PMID: 34375293      PMCID: PMC8904133          DOI: 10.1109/JBHI.2021.3103646

Source DB:  PubMed          Journal:  IEEE J Biomed Health Inform        ISSN: 2168-2194            Impact factor:   5.772


  19 in total

1.  Discretely-constrained deep network for weakly supervised segmentation.

Authors:  Jizong Peng; Hoel Kervadec; Jose Dolz; Ismail Ben Ayed; Marco Pedersoli; Christian Desrosiers
Journal:  Neural Netw       Date:  2020-07-18

2.  Uncertainty-aware multi-view co-training for semi-supervised medical image segmentation and domain adaptation.

Authors:  Yingda Xia; Dong Yang; Zhiding Yu; Fengze Liu; Jinzheng Cai; Lequan Yu; Zhuotun Zhu; Daguang Xu; Alan Yuille; Holger Roth
Journal:  Med Image Anal       Date:  2020-06-27       Impact factor: 8.545

3.  Self-paced and self-consistent co-training for semi-supervised image segmentation.

Authors:  Ping Wang; Jizong Peng; Marco Pedersoli; Yuanfeng Zhou; Caiming Zhang; Christian Desrosiers
Journal:  Med Image Anal       Date:  2021-06-26       Impact factor: 8.545

Review 4.  Review of Artificial Intelligence Techniques in Imaging Data Acquisition, Segmentation, and Diagnosis for COVID-19.

Authors:  Feng Shi; Jun Wang; Jun Shi; Ziyan Wu; Qian Wang; Zhenyu Tang; Kelei He; Yinghuan Shi; Dinggang Shen
Journal:  IEEE Rev Biomed Eng       Date:  2021-01-22

5.  UNet++: A Nested U-Net Architecture for Medical Image Segmentation.

Authors:  Zongwei Zhou; Md Mahfuzur Rahman Siddiquee; Nima Tajbakhsh; Jianming Liang
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6.  A Noise-Robust Framework for Automatic Segmentation of COVID-19 Pneumonia Lesions From CT Images.

Authors:  Guotai Wang; Xinglong Liu; Chaoping Li; Zhiyong Xu; Jiugen Ruan; Haifeng Zhu; Tao Meng; Kang Li; Ning Huang; Shaoting Zhang
Journal:  IEEE Trans Med Imaging       Date:  2020-08       Impact factor: 10.048

7.  A Weakly-Supervised Framework for COVID-19 Classification and Lesion Localization From Chest CT.

Authors:  Xinggang Wang; Xianbo Deng; Qing Fu; Qiang Zhou; Jiapei Feng; Hui Ma; Wenyu Liu; Chuansheng Zheng
Journal:  IEEE Trans Med Imaging       Date:  2020-08       Impact factor: 10.048

8.  Chest CT Findings in 2019 Novel Coronavirus (2019-nCoV) Infections from Wuhan, China: Key Points for the Radiologist.

Authors:  Jeffrey P Kanne
Journal:  Radiology       Date:  2020-02-04       Impact factor: 11.105

9.  Sensitivity of Chest CT for COVID-19: Comparison to RT-PCR.

Authors:  Yicheng Fang; Huangqi Zhang; Jicheng Xie; Minjie Lin; Lingjun Ying; Peipei Pang; Wenbin Ji
Journal:  Radiology       Date:  2020-02-19       Impact factor: 11.105

10.  Using Artificial Intelligence to Detect COVID-19 and Community-acquired Pneumonia Based on Pulmonary CT: Evaluation of the Diagnostic Accuracy.

Authors:  Lin Li; Lixin Qin; Zeguo Xu; Youbing Yin; Xin Wang; Bin Kong; Junjie Bai; Yi Lu; Zhenghan Fang; Qi Song; Kunlin Cao; Daliang Liu; Guisheng Wang; Qizhong Xu; Xisheng Fang; Shiqin Zhang; Juan Xia; Jun Xia
Journal:  Radiology       Date:  2020-03-19       Impact factor: 11.105

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