Literature DB >> 32601420

An inducible genome editing system for plants.

Lingling Ye1,2, Munan Lyu1,2, Robertas Ursache3, Xin Wang1,2, Ari Löytynoja1, Ari Pekka Mähönen4,5.   

Abstract

Conditional manipulation of gene expression is a key approach to investigating the primary function of a gene in a biological process. While conditional and cell-type-specific overexpression systems exist for plants, there are currently no systems available to disable a gene completely and conditionally. Here, we present a new tool with which target genes can efficiently and conditionally be knocked out by genome editing at any developmental stage. Target genes can also be knocked out in a cell-type-specific manner. Our tool is easy to construct and will be particularly useful for studying genes having null alleles that are non-viable or show pleiotropic developmental defects.

Entities:  

Mesh:

Year:  2020        PMID: 32601420      PMCID: PMC7611339          DOI: 10.1038/s41477-020-0695-2

Source DB:  PubMed          Journal:  Nat Plants        ISSN: 2055-0278            Impact factor:   15.793


  39 in total

Review 1.  Intercellular and systemic trafficking of RNAs in plants.

Authors:  Lin Liu; Xuemei Chen
Journal:  Nat Plants       Date:  2018-11-02       Impact factor: 15.793

2.  The RETINOBLASTOMA-RELATED gene regulates stem cell maintenance in Arabidopsis roots.

Authors:  Marjolein Wildwater; Ana Campilho; Jose Manuel Perez-Perez; Renze Heidstra; Ikram Blilou; Henrie Korthout; Jayanta Chatterjee; Luisa Mariconti; Wilhelm Gruissem; Ben Scheres
Journal:  Cell       Date:  2005-12-29       Impact factor: 41.582

3.  Arabidopsis RETINOBLASTOMA-RELATED is required for stem cell maintenance, cell differentiation, and lateral organ production.

Authors:  Lorenzo Borghi; Ruben Gutzat; Johannes Fütterer; Yec'han Laizet; Lars Hennig; Wilhelm Gruissem
Journal:  Plant Cell       Date:  2010-06-04       Impact factor: 11.277

4.  Distinct cell-autonomous functions of RETINOBLASTOMA-RELATED in Arabidopsis stem cells revealed by the Brother of Brainbow clonal analysis system.

Authors:  Guy Wachsman; Renze Heidstra; Ben Scheres
Journal:  Plant Cell       Date:  2011-07-08       Impact factor: 11.277

Review 5.  Uncovering the post-embryonic functions of gametophytic- and embryonic-lethal genes.

Authors:  Héctor Candela; José Manuel Pérez-Pérez; José Luis Micol
Journal:  Trends Plant Sci       Date:  2011-03-17       Impact factor: 18.313

6.  Mosaic analyses using marked activation and deletion clones dissect Arabidopsis SCARECROW action in asymmetric cell division.

Authors:  Renze Heidstra; David Welch; Ben Scheres
Journal:  Genes Dev       Date:  2004-08-15       Impact factor: 11.361

7.  Inducible knock-down of GNOM during root formation reveals tissue-specific response to auxin transport and its modulation of local auxin biosynthesis.

Authors:  Jingzhe Guo; Jun Wei; Jian Xu; Meng-Xiang Sun
Journal:  J Exp Bot       Date:  2014-01-22       Impact factor: 6.992

8.  Targeted mutagenesis of Arabidopsis thaliana using engineered TAL effector nucleases.

Authors:  Michelle Christian; Yiping Qi; Yong Zhang; Daniel F Voytas
Journal:  G3 (Bethesda)       Date:  2013-10-03       Impact factor: 3.154

9.  Targeted deletion and inversion of tandemly arrayed genes in Arabidopsis thaliana using zinc finger nucleases.

Authors:  Yiping Qi; Xiaohong Li; Yong Zhang; Colby G Starker; Nicholas J Baltes; Feng Zhang; Jeffry D Sander; Deepak Reyon; J Keith Joung; Daniel F Voytas
Journal:  G3 (Bethesda)       Date:  2013-10-03       Impact factor: 3.154

View more
  27 in total

Review 1.  Harnessing tissue-specific genome editing in plants through CRISPR/Cas system: current state and future prospects.

Authors:  Dhanawantari L Singha; Debajit Das; Yogita N Sarki; Naimisha Chowdhury; Monica Sharma; Jitendra Maharana; Channakeshavaiah Chikkaputtaiah
Journal:  Planta       Date:  2021-12-28       Impact factor: 4.116

Review 2.  Conditional and tissue-specific approaches to dissect essential mechanisms in plant development.

Authors:  Marie L Pfeiffer; Joanna Winkler; Daniël Van Damme; Thomas B Jacobs; Moritz K Nowack
Journal:  Curr Opin Plant Biol       Date:  2021-10-13       Impact factor: 7.834

Review 3.  General guidelines for CRISPR/Cas-based genome editing in plants.

Authors:  Musa Kavas; Ceyhun Kayihan; Ufuk Demirel; Emre Aksoy; Kubilay Yildirim; Bayram Ali Yerlikaya; Irmak Çalik; İlkay Sevgen
Journal:  Mol Biol Rep       Date:  2022-09-15       Impact factor: 2.742

4.  Exocyst function and specificity during Casparian strip formation-insights via a gene-edited endodermis.

Authors:  Priya Ramakrishna; Marc Somssich
Journal:  Plant Physiol       Date:  2022-06-01       Impact factor: 8.005

Review 5.  State-of-the-Art in CRISPR Technology and Engineering Drought, Salinity, and Thermo-tolerant crop plants.

Authors:  Kunchapu Chennakesavulu; Harshita Singh; Prabodh Kumar Trivedi; Mukesh Jain; Shri Ram Yadav
Journal:  Plant Cell Rep       Date:  2021-03-19       Impact factor: 4.570

6.  Simple, efficient and open-source CRISPR/Cas9 strategy for multi-site genome editing in Populus tremula × alba.

Authors:  Paolo M Triozzi; Henry W Schmidt; Christopher Dervinis; Matias Kirst; Daniel Conde
Journal:  Tree Physiol       Date:  2021-11-08       Impact factor: 4.196

7.  Cell-by-cell dissection of phloem development links a maturation gradient to cell specialization.

Authors:  Pawel Roszak; Jung-Ok Heo; Bernhard Blob; Koichi Toyokura; Yuki Sugiyama; Maria Angels de Luis Balaguer; Winnie W Y Lau; Fiona Hamey; Jacopo Cirrone; Ewelina Madej; Alida M Bouatta; Xin Wang; Marjorie Guichard; Robertas Ursache; Hugo Tavares; Kevin Verstaen; Jos Wendrich; Charles W Melnyk; Yoshihisa Oda; Dennis Shasha; Sebastian E Ahnert; Yvan Saeys; Bert De Rybel; Renze Heidstra; Ben Scheres; Guido Grossmann; Ari Pekka Mähönen; Philipp Denninger; Berthold Göttgens; Rosangela Sozzani; Kenneth D Birnbaum; Yrjö Helariutta
Journal:  Science       Date:  2021-12-24       Impact factor: 47.728

8.  Prolyl Hydroxylase Paralogs in Nicotiana benthamiana Show High Similarity With Regard to Substrate Specificity.

Authors:  Réka Mócsai; Kathrin Göritzer; David Stenitzer; Daniel Maresch; Richard Strasser; Friedrich Altmann
Journal:  Front Plant Sci       Date:  2021-03-02       Impact factor: 6.627

9.  Efficient simultaneous mutagenesis of multiple genes in specific plant tissues by multiplex CRISPR.

Authors:  Norbert Bollier; Rafael Andrade Buono; Thomas B Jacobs; Moritz K Nowack
Journal:  Plant Biotechnol J       Date:  2021-01-13       Impact factor: 9.803

10.  Engineered degradation of EYFP-tagged CENH3 via the 26S proteasome pathway in plants.

Authors:  Eberhard Sorge; Dmitri Demidov; Inna Lermontova; Andreas Houben; Udo Conrad
Journal:  PLoS One       Date:  2021-02-12       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.