Literature DB >> 32590389

External Validation of an Acute Respiratory Distress Syndrome Prediction Model Using Radiology Reports.

Anoop Mayampurath1, Matthew M Churpek1, Xin Su2, Sameep Shah2, Elizabeth Munroe1, Bhakti Patel1, Dmitriy Dligach2, Majid Afshar2.   

Abstract

OBJECTIVES: Acute respiratory distress syndrome is frequently under recognized and associated with increased mortality. Previously, we developed a model that used machine learning and natural language processing of text from radiology reports to identify acute respiratory distress syndrome. The model showed improved performance in diagnosing acute respiratory distress syndrome when compared to a rule-based method. In this study, our objective was to externally validate the natural language processing model in patients from an independent hospital setting.
DESIGN: Secondary analysis of data across five prospective clinical studies.
SETTING: An urban, tertiary care, academic hospital. PATIENTS: Adult patients admitted to the medical ICU and at-risk for acute respiratory distress syndrome.
INTERVENTIONS: None.
MEASUREMENTS AND MAIN RESULTS: The natural language processing model was previously derived and internally validated in burn, trauma, and medical patients at Loyola University Medical Center. Two machine learning models were examined with the following text features from qualifying radiology reports: 1) word representations (n-grams) and 2) standardized clinical named entity mentions mapped from the National Library of Medicine Unified Medical Language System. The models were externally validated in a cohort of 235 patients at the University of Chicago Medicine, among which 110 (47%) were diagnosed with acute respiratory distress syndrome by expert annotation. During external validation, the n-gram model demonstrated good discrimination between acute respiratory distress syndrome and nonacute respiratory distress syndrome patients (C-statistic, 0.78; 95% CI, 0.72-0.84). The n-gram model had a higher discrimination for acute respiratory distress syndrome when compared with the standardized named entity model, although not statistically significant (C-statistic 0.78 vs 0.72; p = 0.09). The most important features in the model had good face validity for acute respiratory distress syndrome characteristics but differences in frequencies did occur between hospital settings.
CONCLUSIONS: Our computable phenotype for acute respiratory distress syndrome had good discrimination in external validation and may be used by other health systems for case-identification. Discrepancies in feature representation are likely due to differences in characteristics of the patient cohorts.

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Year:  2020        PMID: 32590389      PMCID: PMC7872467          DOI: 10.1097/CCM.0000000000004468

Source DB:  PubMed          Journal:  Crit Care Med        ISSN: 0090-3493            Impact factor:   9.296


  23 in total

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Journal:  J Am Med Inform Assoc       Date:  2010 Sep-Oct       Impact factor: 4.497

2.  Validation of an electronic surveillance system for acute lung injury.

Authors:  Vitaly Herasevich; Murat Yilmaz; Hasrat Khan; Rolf D Hubmayr; Ognjen Gajic
Journal:  Intensive Care Med       Date:  2009-03-12       Impact factor: 17.440

3.  Epidemiology, Patterns of Care, and Mortality for Patients With Acute Respiratory Distress Syndrome in Intensive Care Units in 50 Countries.

Authors:  Giacomo Bellani; John G Laffey; Tài Pham; Eddy Fan; Laurent Brochard; Andres Esteban; Luciano Gattinoni; Frank van Haren; Anders Larsson; Daniel F McAuley; Marco Ranieri; Gordon Rubenfeld; B Taylor Thompson; Hermann Wrigge; Arthur S Slutsky; Antonio Pesenti
Journal:  JAMA       Date:  2016-02-23       Impact factor: 56.272

4.  Distinct molecular phenotypes of direct vs indirect ARDS in single-center and multicenter studies.

Authors:  Carolyn S Calfee; David R Janz; Gordon R Bernard; Addison K May; Kirsten N Kangelaris; Michael A Matthay; Lorraine B Ware
Journal:  Chest       Date:  2015-06       Impact factor: 9.410

5.  Effect of Noninvasive Ventilation Delivered by Helmet vs Face Mask on the Rate of Endotracheal Intubation in Patients With Acute Respiratory Distress Syndrome: A Randomized Clinical Trial.

Authors:  Bhakti K Patel; Krysta S Wolfe; Anne S Pohlman; Jesse B Hall; John P Kress
Journal:  JAMA       Date:  2016-06-14       Impact factor: 56.272

6.  Differences between Patients in Whom Physicians Agree and Disagree about the Diagnosis of Acute Respiratory Distress Syndrome.

Authors:  Michael W Sjoding; Timothy P Hofer; Ivan Co; Jakob I McSparron; Theodore J Iwashyna
Journal:  Ann Am Thorac Soc       Date:  2019-02

7.  External Validity of Electronic Sniffers for Automated Recognition of Acute Respiratory Distress Syndrome.

Authors:  Andrew C McKown; Ryan M Brown; Lorraine B Ware; Jonathan P Wanderer
Journal:  J Intensive Care Med       Date:  2017-07-24       Impact factor: 3.510

8.  Early physical and occupational therapy in mechanically ventilated, critically ill patients: a randomised controlled trial.

Authors:  William D Schweickert; Mark C Pohlman; Anne S Pohlman; Celerina Nigos; Amy J Pawlik; Cheryl L Esbrook; Linda Spears; Megan Miller; Mietka Franczyk; Deanna Deprizio; Gregory A Schmidt; Amy Bowman; Rhonda Barr; Kathryn E McCallister; Jesse B Hall; John P Kress
Journal:  Lancet       Date:  2009-05-14       Impact factor: 79.321

9.  Comparison of 3 methods of detecting acute respiratory distress syndrome: clinical screening, chart review, and diagnostic coding.

Authors:  April E Howard; Carrie Courtney-Shapiro; Lynn A Kelso; Michele Goltz; Peter E Morris
Journal:  Am J Crit Care       Date:  2004-01       Impact factor: 2.228

10.  Validation study of an automated electronic acute lung injury screening tool.

Authors:  Helen C Azzam; Satjeet S Khalsa; Richard Urbani; Chirag V Shah; Jason D Christie; Paul N Lanken; Barry D Fuchs
Journal:  J Am Med Inform Assoc       Date:  2009-04-23       Impact factor: 4.497

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  2 in total

1.  Identifying ARDS using the Hierarchical Attention Network with Sentence Objectives Framework.

Authors:  Kevin Lybarger; Linzee Mabrey; Matthew Thau; Pavan K Bhatraju; Mark Wurfel; Meliha Yetisgen
Journal:  AMIA Annu Symp Proc       Date:  2022-02-21

2.  Comparison of radiographic pneumothorax and pneumomediastinum in COVID-19 vs. non-COVID-19 acute respiratory distress syndrome.

Authors:  Daniel B Knox; Alex Brunhoeber; Ithan D Peltan; Samuel M Brown; Michael J Lanspa
Journal:  Intensive Care Med       Date:  2022-08-05       Impact factor: 41.787

  2 in total

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