Marco Di Giovannantonio1, Xuelin Yao2, Kristjan Eimre1, José I Urgel1, Pascal Ruffieux1, Carlo A Pignedoli1, Klaus Müllen2,3, Roman Fasel1,4, Akimitsu Narita2,5. 1. Empa, Swiss Federal Laboratories for Materials Science and Technology, nanotech@surfaces Laboratory, 8600 Dübendorf, Switzerland. 2. Max Planck Institute for Polymer Research, 55128 Mainz, Germany. 3. Institute of Physical Chemistry, Johannes Gutenberg University Mainz, Duesbergweg 10-14, 55128 Mainz, Germany. 4. Department of Chemistry and Biochemistry, University of Bern, 3012 Bern, Switzerland. 5. Organic and Carbon Nanomaterials Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa 904-0495, Japan.
Abstract
Coronoids, polycyclic aromatic hydrocarbons with geometrically defined cavities, are promising model structures of porous graphene. Here, we report the on-surface synthesis of C168 and C140 coronoids, referred to as [6]- and [5]coronoid, respectively, using 5,9-dibromo-14-phenylbenzo[m]tetraphene as the precursor. These coronoids entail large cavities (>1 nm) with inner zigzag edges, distinct from their outer armchair edges. While [6]coronoid is planar, [5]coronoid is not. Low-temperature scanning tunneling microscopy/spectroscopy and noncontact atomic force microscopy unveil structural and electronic properties in accordance with those obtained from density functional theory calculations. Detailed analysis of ring current effects identifies the rings with the highest aromaticity of these coronoids, whose pattern matches their Clar structure. The pores of the obtained coronoids offer intriguing possibilities of further functionalization toward advanced host-guest applications.
Coronoids, polycyclic aromatic hydrocarbons with geometrically defined cavities, are promising model structures of porous graphene. Here, we report the on-surface synthesis of C168 and C140 coronoids, referred to as [6]- and [5]coronoid, respectively, using 5,9-dibromo-14-phenylbenzo[m]tetraphene as the precursor. These coronoids entail large cavities (>1 nm) with inner zigzag edges, distinct from their outer armchair edges. While [6]coronoid is planar, [5]coronoid is not. Low-temperature scanning tunneling microscopy/spectroscopy and noncontact atomic force microscopy unveil structural and electronic properties in accordance with those obtained from density functional theory calculations. Detailed analysis of ring current effects identifies the rings with the highest aromaticity of these coronoids, whose pattern matches their Clar structure. The pores of the obtained coronoids offer intriguing possibilities of further functionalization toward advanced host-guest applications.
Coronoids are macrocyclic conjugated
hydrocarbons formed by circularly fused benzenoid rings, featuring
a cavity.[1−3] Kekulene is a representative coronoid with a single
layer of benzene rings around the cavity, belonging to the family
of cycloarenes. The first synthesis of kekulene in 1978[4] provided fundamental information about the nature
of macrocyclic conjugation and aromaticity, pointing out that kekulene
is better represented by Clar’s model rather than the so-called
Kekulé structure. Other examples of cycloarenes are cyclo[d,e,d,e,e,d,e,d,e,e]decakisbenzene,[5] predicted to have intriguing electronic and magnetic properties,[6−9] septulene,[10] and octulene.[11] In 2016, we reported a C216 coronoid,[1] a macrocyclic molecule with 216 sp2 carbon atoms distributed in more than one layer of circularly fused
benzene rings (Figure ). The C216 coronoid can also be regarded as a nanographene
with a cavity arising upon removal of the central benzene ring from
a C222 nanographene (Figure ). Detailed characterization of C216 was compromised by its vanishing solubility, which also limited
further synthetic studies of large coronoids. Very recently, Tan and
co-workers reported a synthesis of mesityl-substituted C108 coronoid, which formed molecular bilayers.[12]
Figure 1
From
nanographenes to coronoids. Clar sextets are filled in light
blue. See Figure S3 for pore size determination.
From
nanographenes to coronoids. Clar sextets are filled in light
blue. See Figure S3 for pore size determination.On the other hand, on-surface chemistry offers
an alternative method
to synthesize nanographenes and to explore their structure and electronic
properties via state-of-the-art scanning probe microscopy and spectroscopy.[13−15] Recently, kekulene was studied using noncontact atomic force microscopy
(nc-AFM), which corroborated its structure in accordance with Clar’s
model.[16] Additionally, the on-surface synthesis
of a C108 coronoid (Figure ) was achieved,[17] which represents a smaller homologue of the C216 coronoid.
However, to date, no other coronoids have been synthesized on surfaces.Coronoids can also serve as models for graphene with nanoscale
cavities, namely nanoporous graphene, which, depending on the size
and structure of the pores, has intriguing electronic and magnetic
properties.[18−20] Nanoporous graphene with zigzag-edge cavities stands
out[21] since it is related to nanographenes
and graphene nanoribbons with zigzag edges.[22,23] However, all reported coronoids have inner and outer armchair edges,
and coronoids hosting a cavity with zigzag edges have never been synthesized.In this work, we targeted an exemplary coronoid (C168) with outer armchair edges and a large pore (1.45 nm, C–C
distance) featuring inner zigzag edges. Conceptually, this molecule
can be obtained via removal of a kekulene from the aforementioned C216 coronoid (Figure ). Using 5,9-dibromo-14-phenylbenzo[m]tetraphene
(1) as a precursor, we achieved a thermally activated
on-surface synthesis of the C168 coronoid through dehalogenative
aryl–aryl coupling and subsequent cyclodehydrogenation on Au(111)
(Figure a). C168 is obtained by the coupling of six molecules 1 and is hereafter called [6]coronoid. The on-surface synthesis also
led to the formation of a coronoid consisting of five molecules 1, namely C140 ([5]coronoid), which adopts a
strain-driven nonplanar conformation. The on-surface structural and
electronic characterization of these coronoids was performed by scanning
tunneling microscopy/spectroscopy (STM/STS) and nc-AFM, which were
supplemented by density functional theory (DFT) calculations supporting
the experimental results and shedding light on the aromaticity of
[5]- and [6]coronoids.
Figure 2
On-surface synthesis and characterization of [6]- and
[5]coronoids.
(a) Synthetic scheme. (b,f) High-resolution STM images. (c,g) nc-AFM
images acquired with a CO-functionalized tip. (d,h) Simulated nc-AFM
images of the DFT-optimized structures shown in panels (e,i). (j)
3D view of tip height (z) dependent nc-AFM images of [5]coronoid.
(k) Frequency shift (Δf) vs Δz curves at different molecular sites (the colors of the
curves correspond to those of the dots and the dashed lines in panels
g and j, respectively). Scanning parameters: (b) Vb = −20 mV, It = 100
pA; (c) Δz = +150 Å with respect to STM set point: Vb = −5 mV, It = 100 pA; (f) Vb = −20 mV, It = 100 pA; (g) Δz = +170 Å with
respect to STM set point: Vb = −5
mV, It = 100 pA; (j) Δz with respect to STM set point (Vb =
−5 mV, It = 100 pA) is indicated
for each layer.
On-surface synthesis and characterization of [6]- and
[5]coronoids.
(a) Synthetic scheme. (b,f) High-resolution STM images. (c,g) nc-AFM
images acquired with a CO-functionalized tip. (d,h) Simulated nc-AFM
images of the DFT-optimized structures shown in panels (e,i). (j)
3D view of tip height (z) dependent nc-AFM images of [5]coronoid.
(k) Frequency shift (Δf) vs Δz curves at different molecular sites (the colors of the
curves correspond to those of the dots and the dashed lines in panels
g and j, respectively). Scanning parameters: (b) Vb = −20 mV, It = 100
pA; (c) Δz = +150 Å with respect to STM set point: Vb = −5 mV, It = 100 pA; (f) Vb = −20 mV, It = 100 pA; (g) Δz = +170 Å with
respect to STM set point: Vb = −5
mV, It = 100 pA; (j) Δz with respect to STM set point (Vb =
−5 mV, It = 100 pA) is indicated
for each layer.For the synthesis of [6]coronoid
we have designed the U-shaped
precursor 1, having a benzo[m]tetraphene
core with a preinstalled zigzag edge as well as two bromo groups carefully
positioned to allow for the macrocyclization on surface (see the SI for the synthesis of characterizations of 1). When 1 was deposited onto a Au(111) surface
held at 200 °C, the homolytic cleavage of C–Br bonds readily
took place, initiating aryl–aryl coupling.[24] A temperature increase to 380 °C promoted the cyclodehydrogenation
of the obtained nanostructures.[25−27] The final products of this sequence
consisted of various chainlike structures, as well as some macrocyclic
molecules (Figure S1) including highly
symmetrical ones (Figure b,f). The yields of [5]- and [6]coronoids could be increased
by applying high-dilution conditions,[28] with the highest yields of 30% and 6%, respectively, when the deposition
rate of 1 onto Au(111) was set at 0.23 monolayer/hour
(see Figure S2 for further details). The
higher yield of [5]coronoid is most likely due to the ability of pentameric
intermediates to undergo intramolecular head-to-tail coupling before
the incorporation of the sixth building block, prevented by the high-dilution
conditions.To assess the exact chemical structure of the observed
macrocycles,
we acquired constant-height frequency-shift nc-AFM images using a
CO-functionalized tip,[29] which clearly
revealed the formation of [6]- and [5]coronoid (Figure c,g). [6]Coronoid is planar on the Au(111)
surface and displays the expected armchair/zigzag configurations of
its outer/inner edges, as further confirmed by the excellent agreement
of the experimental results with simulated nc-AFM images (Figure d) based on the DFT-optimized
structural model (Figure e). The size of the inner cavity is measured to be 1.40 ±
0.05 nm (C–C distance of two opposing zigzag edges), in accordance
with the DFT-calculated value of 1.45 nm (see the SI for details). The [5]coronoid also reveals an armchair/zigzag
configuration of outer/inner edges (Figure f,g), while the size of the inner cavity
is reduced to 1.10 ± 0.05 nm (diameter of the inscribed circle
through the central carbon atoms of the zigzag edges measured from
the nc-AFM data). Again, this value agrees with the pore size of 1.09
nm estimated from the DFT-optimized geometry of the [5]coronoid on
Au(111) (Figure i).
For the [5]coronoid, two out of five inner edges appear as brighter/higher
features in both the STM and nc-AFM images (Figure f,g). Such a nonplanar structure is in line
with a partial flattening of the more distorted gas-phase geometry
of [5]coronoid (Figure S3b) upon adsorption.
For quantification, we acquired z-dependent nc-AFM images (Figure j) and recorded the
frequency shift (Δf) of the CO-functionalized
tip while it approached the molecule to a specific location (Figure k). This allowed
us to extract a height difference between the highest (blue) and lowest
(red) part of the molecule of 180 ± 10 pm, in good agreement
with a DFT-calculated value of 170 pm (determined from the optimized
geometry in Figure i). This height difference is substantially smaller than the value
calculated for the [5]coronoid in the gas phase (360 pm, Figure S3b), which reflects the effect of van
der Waals interactions with the Au(111) surface upon flattening the
molecule.To characterize the electronic properties of the [5]-
and [6]coronoids,
we performed constant-height differential conductance dI/dV measurements and constant-current dI/dV mappings at the detected positive (PIR) and
negative ion resonances (NIR) (Figure a–j). Gas-phase orbital calculations (Figure k) show for [6]-
and [5]coronoid, respectively, 6 and 5 close-lying frontier orbitals
both for occupied and unoccupied levels. This is reflected in DFT
calculations of the molecules on Au(111), where both the HOMO and
LUMO are hybridized with the respective close-lying molecular orbitals
into singular frontier ion resonances (see Figure S4 for details) that can be assigned to the experimentally
measured PIR and NIR signatures. Hence, the experimental HOMO–LUMO
gaps of the [6]- and [5]coronoids on Au(111) are 2.2 and 2.5 eV, respectively.
DFT calculations predicted the gas-phase HOMO–LUMO gaps of
the [5]- and [6]coronoid, C216 and C222, to be 2.30, 2.25, 2.15, and 1.77 eV, respectively (Figure k), highlighting
the trend of increasing gap with increasing pore size and decreasing
number of carbon atoms.
Figure 3
Differential conductance measurements and DFT
simulations of [6]-
and [5]coronoids. (a,f) dI/dV spectra. (b,c,g,h) dI/dV maps. (d,e,i,j)
DFT-calculated local density of states at the frontier PDOS peaks
(see Figure S4) of the two systems on Au(111)
at the PBE level of theory. (k) Gas phase electronic characterization
of the four indicated systems at the B3LYP/6-311+G** level of theory.
The red and blue dots represent the occupied and unoccupied states,
respectively The HOMO and LUMO wave functions are displayed. For the
[5]coronoid, the LUMO is doubly quasidegenerate and both orbitals
are shown.
Differential conductance measurements and DFT
simulations of [6]-
and [5]coronoids. (a,f) dI/dV spectra. (b,c,g,h) dI/dV maps. (d,e,i,j)
DFT-calculated local density of states at the frontier PDOS peaks
(see Figure S4) of the two systems on Au(111)
at the PBE level of theory. (k) Gas phase electronic characterization
of the four indicated systems at the B3LYP/6-311+G** level of theory.
The red and blue dots represent the occupied and unoccupied states,
respectively The HOMO and LUMO wave functions are displayed. For the
[5]coronoid, the LUMO is doubly quasidegenerate and both orbitals
are shown.The [6]coronoid could potentially
constitute a building block for
extended nanoporous graphene with larger cavities than those reported
so far[20,30−32] and thus be of interest
in the framework of graphene antidot lattices.[33] We calculated the electronic properties of such hypothetical
periodic layer via tight binding (TB) simulations (see Figure S5 for details), which reveal a band gap
of 0.63 eV (between frontier bands localized at each cavity rim),
considerably reduced compared to the [6]coronoid HOMO–LUMO
gap (TB) of 1.51 eV.Carbon macrocycles are known to have peculiar
aromaticity properties,
leading to intriguing concepts, such as superaromaticity,[7,34] and represent an ideal playground for studying fundamental aspects
of the π-electron clouds. To display the aromaticity pattern
of the [6]- and [5]coronoid, we performed nucleus-independent chemical
shift (NICS) calculations at 1 Å above the center of each carbon
ring (NICS(1), Figure a,d). The results qualitatively match between
similar locations of [6]- and [5]coronoids, indicating that the nonplanarity
of the latter does not significantly affect its aromaticity. Moreover,
the NICS(1) patterns resemble the Clar
structure of these coronoids (compare Figures and 4), with each
Clar sextet showing strong aromatic character (from −22 ppm
to −27 ppm), similar to benzene (−29 ppm). The hexagons
connecting the aromatic phenanthro[2,3,4,5-pqrab]perylene
substructures (at the “bridges” between the fused precursor
units) exhibit positive NICS value (16 ppm, Figure a,d) reminiscent of perylene.[35] In this regard, the [6]- and [5]coronoids can
be well represented by alternatingly fused perylene and pyrene constituents
(Figure S6). To shed further light on the
observed aromaticity pattern, we performed a harmonic oscillator model
of aromaticity (HOMA) analysis (Figure b,e), which qualitatively matches the NICS(1) patterns of [6]- and [5]coronoid. Further, we
studied the induced currents due to an applied magnetic field by analyzing
the anisotropy of the induced current density (ACID) (Figure c,f). The valence electrons
are delocalized throughout the [6]- and [5]coronoids. Each phenanthro[2,3,4,5-pqrab]perylene substructure displays a macroscopic diatropic
current on its outer edge (red arrows in Figure c,f). Within these substructures, the most
aromatic sextets exhibit local diatropic currents.
Figure 4
Aromaticity of [6]- and
[5]coronoid. (a,d) NICS(1) patterns.
(b,e) HOMA analysis. (c,f) ACID analysis (isovalue
0.05 au) and currents induced in the delocalized electrons. Red arrows
show diatropic currents. All calculations performed at the B3LYP/6-311+G**//B3LYP/6-311G**
level of theory.
Aromaticity of [6]- and
[5]coronoid. (a,d) NICS(1) patterns.
(b,e) HOMA analysis. (c,f) ACID analysis (isovalue
0.05 au) and currents induced in the delocalized electrons. Red arrows
show diatropic currents. All calculations performed at the B3LYP/6-311+G**//B3LYP/6-311G**
level of theory.In conclusion, we have
achieved the successful on-surface synthesis
of large, planar [6]- and nonplanar [5]coronoids featuring outer armchair
and inner zigzag edges. Our study provides a complete characterization
of their fundamental structural and electronic properties, revealing
a HOMO–LUMO gap of 2.2 and 2.5 eV on Au(111), respectively.
Both coronoids present similar aromaticity pattern and homogeneously
distributed π-electron clouds, and the location of the most
aromatic sextets matches their Clar structure. The [6]- and [5]coronoid
have unprecedentedly large pores of 1.40 ± 0.05 and 1.10 ±
0.05 nm, respectively. Our synthetic strategy opens new avenues toward
coronoids with diversified outer and inner edge structures and offers
a rich playground to investigate fundamental electronic properties
of coronoids. Further, lateral fusion of these coronoids potentially
leads to nanoporous graphene.
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