| Literature DB >> 32577514 |
Seiji Ogo1,2,3, Takahiro Kishima1,2, Takeshi Yatabe1,2,3, Keishi Miyazawa1,2, Ryunosuke Yamasaki1,2, Takahiro Matsumoto1,2,3, Tatsuya Ando1,2,3, Mitsuhiro Kikkawa1,2,3, Miho Isegawa3, Ki-Seok Yoon2,3, Shinya Hayami4.
Abstract
The study of hydrogenase enzymes (H2ases) is necessary because of their importance to a future hydrogen energy economy. These enzymes come in three distinct classes: [NiFe] H2ases, which have a propensity toward H2 oxidation; [FeFe] H2ases, which have a propensity toward H2 evolution; and [Fe] H2ases, which catalyze H- transfer. Modeling these enzymes has so far treated them as different species, which is understandable given the different cores and ligand sets of the natural molecules. Here, we demonstrate, using x-ray analysis and nuclear magnetic resonance, infrared, Mössbauer spectroscopies, and electrochemical measurement, that the catalytic properties of all three enzymes can be mimicked with only three isomers of the same NiFe complex.Entities:
Year: 2020 PMID: 32577514 PMCID: PMC7286669 DOI: 10.1126/sciadv.aaz8181
Source DB: PubMed Journal: Sci Adv ISSN: 2375-2548 Impact factor: 14.136
Fig. 1The active site structures of [NiFe] H2ases that mainly catalyze H2 oxidation reactions, [FeFe] H2ases that mainly catalyze H2 evolution reactions, and [Fe] H2ases that catalyze H− transfer to the substrate via heterolytic H2 cleavage.
X, possible H2 active sites; Y, methenyltetrahydromethanopterin; GMP, guanosine monophosphate.
Fig. 2Formation of three isomers of the hydride complexes, 2a, 2b, and 2c, by the reaction of 1 with H2 in water.
Fig. 3ORTEP drawings of the solid-state structures of [2a](PF6), [2b](BAr4), and [2c](PF6) with ellipsoids at the 50% probability levels.
(A) An ORTEP drawing of [2a](PF6). H sits between the Fe and Ni centers. The hydrogen atoms (except for the hydride ligand), solvents, and counter anion (PF6−) are omitted for clarity. Selected interatomic distances (l/Å) and angles (ϕ/deg): Ni1─H1, 2.04(2); Fe1─H1, 1.47(2); Ni1···Fe1, 2.6877(4); Fe1─P1, 2.1757(6); Fe1─P2, 2.2562(6); Fe1─S1, 2.3413(5); Fe1─S2, 2.3680(6); Fe1─C1, 1.739(2); Ni1─S1, 2.1731(5); Ni1─S2, 2.1983(6); Ni1─N1, 1.9973(18); Ni1─N2, 1.9864(18); C1─O1, 1.156(3); Ni1─S1─Fe1, 72.969(17); Ni1─S2─Fe1, 72.006(18). (B) An ORTEP drawing of [2b](BAr4). H is trans to the CO ligand. The hydrogen atoms (except for the hydride ligand), solvents, and counter anion (BAr4−) are omitted for clarity. BAr4−: tetrakis(m-terphenyl-5′-yl)borate. Selected interatomic distances (l/Å) and angles (ϕ/deg): Fe1─H1, 1.57(3); Ni1···Fe1, 3.0534(6); Fe1─P1, 2.1935(8); Fe1─P2, 2.1772(8); Fe1─S1, 2.3318(8); Fe1─S2, 2.3105(8); Fe1─C1, 1.777(3); Ni1–S1, 2.1544(7); Ni1─S2, 2.1767(7); Ni1─N1, 1.985(2); Ni1─N2, 1.998(2); C1─O1, 1.161(4); Ni1─S1─Fe1, 85.68(3); Ni1─S2─Fe1, 85.70(3). (C) An ORTEP drawing of [2c](PF6). H is cis to the CO ligand. The hydrogen atoms (except for the hydride ligand) and counter anion (PF6−) are omitted for clarity. Selected interatomic distances (l/Å) and angles (ϕ/deg): Fe1─H1, 1.42(4); Ni1···Fe1, 2.8466(7); Fe1─P1, 2.2448(11); Fe1─P2, 2.1833(11); Fe1─S1, 2.3425(11); Fe1─S2, 2.3771(11); Fe1─C1, 1.744(4); Ni1─S1, 2.1737(10); Ni1─S2, 2.1848(10); Ni1─N1, 1.991(3); Ni1─N2, 1.986(3); C1─O1, 1.167(5); Ni1─S1─Fe1, 78.05(3); Ni1─S2─Fe1, 77.09(3).
Spectroscopic properties of 2a, 2b, and 2c and yields of e− transfer, H2 evolution, and H− transfer reactions of 2a, 2b, and 2c with [FeIII(C5Me5)2]+ as an e− acceptor, aqueous acetic acid solution as a H+ source, and methylene blue ([MB]+) as a H− acceptor.
The yields were calculated on the basis of the hydride complexes 2a, 2b, and 2c.
| 1H NMR (ppm)* | −2.76 | −3.83 | −16.62 | |
| IR (cm−1) | ν(C ≡ O) | 1918 | 1910 | 1885 |
| ν(Ni─H─Fe) | 1675 | – | – | |
| δ(H─Fe─CO) | – | 543 | – | |
| ν(Fe─H) | – | – | 1964 | |
| Mössbauer | Isomer shift | 0.00 | 0.08 | 0.14 |
| (mm s−1) | Quadrupole | 1.34 | 1.48 | 1.13 |
| e− transfer† | 57% | 27% | 33% | |
| H2 evolution‡ | 16% | 55% | 9% | |
| H− transfer§ | 4% | 14% | 31% | |
*The chemical shifts of hydride ligands.
†At room temperature for 1min.
‡At room temperature for 30min.
§At room temperature for 60min.
Fig. 4The e− transfer (drawn in red), H2 evolution (drawn in blue), and H− transfer reactions (drawn in green) with three isomers of the hydride complexes, 2a, 2b, and 2c.
Fig. 5The differing reactivity of the three isomers.
Y′, methylene blue [MB]+.