Literature DB >> 15792459

Performance of nonrelativistic and quasi-relativistic hybrid DFT for the prediction of electric and magnetic hyperfine parameters in 57Fe Mössbauer spectra.

Sebastian Sinnecker1, Leonardo D Slep, Eckhard Bill, Frank Neese.   

Abstract

57Fe electric and magnetic hyperfine parameters were calculated for a series of 10 iron model complexes, covering a wide range of oxidation and spin states. Employing the B3LYP hybrid method, results from nonrelativistic density functional theory (DFT) and quasi-relativistic DFT within the zero-order regular approximation (ZORA) were compared. Electron densities at the iron nuclei were calculated and correlated with experimental isomer shifts. It was shown that the fit parameters do not depend on a specific training set of iron complexes and are, therefore, more universal than might be expected. The nonrelativistic and quasi-relativistic electron densities gave fit parameters of similar quality; the ZORA densities are only shifted by a factor of 1.32, upward in the direction of the four-component Dirac-Fock value. From a correlation of calculated electric field gradients and experimental quadrupole splittings, the value of the 57Fe nuclear quadrupole moment was redetermined to a value of 0.16 barn, in good agreement with other studies. The ZORA approach gave no additional improvement of the calculated quadrupole splittings in comparison to the nonrelativistic approach. The comparison of the calculated and measured 57Fe isotropic hyperfine coupling constants (hfcc's) revealed that both the ZORA approach and the inclusion of spin-orbit contributions lead to better agreement between theory and experiment in comparison to the nonrelativistic results. For all iron complexes with small spin-orbit contributions (high-spin ferric and ferryl systems), a distinct underestimation of the isotropic hfcc's was found. Scaling factors of 1.81 (nonrelativistic DFT) and 1.69 (ZORA) are suggested. The calculated 57Fe isotropic hfcc's of the remaining model systems (low-spin ferric and high-spin ferrous systems) contain 10-50% second-order contributions and were found to be in reasonable agreement with the experimental results. This is assumed to be the consequence of error cancellation because g-tensor calculations for these systems are of poor quality with the existing DFT approaches. Excellent agreement between theory and experiment was found for the 57Fe anisotropic hfcc's. Finally, all of the obtained fit parameters were used for an application study of the [Fe(H2O)6]3+ ion. The calculated spectroscopic data are in good agreement with the Mossbauer and electron paramagnetic resonance results discussed in detail in a forthcoming paper.

Entities:  

Year:  2005        PMID: 15792459     DOI: 10.1021/ic048609e

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  51 in total

1.  Mössbauer and EPR study of iron in vacuoles from fermenting Saccharomyces cerevisiae.

Authors:  Allison L Cockrell; Gregory P Holmes-Hampton; Sean P McCormick; Mrinmoy Chakrabarti; Paul A Lindahl
Journal:  Biochemistry       Date:  2011-11-02       Impact factor: 3.162

2.  Mössbauer properties of the diferric cluster and the differential iron(II)-binding affinity of the iron sites in protein R2 of class Ia Escherichia coli ribonucleotide reductase: a DFT/electrostatics study.

Authors:  Wen-Ge Han; Gregory M Sandala; Debra Ann Giammona; Donald Bashford; Louis Noodleman
Journal:  Dalton Trans       Date:  2011-08-12       Impact factor: 4.390

3.  A critical evaluation of DFT, including time-dependent DFT, applied to bioinorganic chemistry.

Authors:  Frank Neese
Journal:  J Biol Inorg Chem       Date:  2006-07-05       Impact factor: 3.358

Review 4.  Hydrogenase Enzymes and Their Synthetic Models: The Role of Metal Hydrides.

Authors:  David Schilter; James M Camara; Mioy T Huynh; Sharon Hammes-Schiffer; Thomas B Rauchfuss
Journal:  Chem Rev       Date:  2016-06-29       Impact factor: 60.622

5.  Electronic State of the His/Tyr-Ligated Heme of BthA by Mössbauer and DFT Analysis.

Authors:  Andrew C Weitz; Saborni Biswas; Kim Rizzolo; Sean Elliott; Emile L Bominaar; Michael P Hendrich
Journal:  Inorg Chem       Date:  2020-06-30       Impact factor: 5.165

6.  Geometric and electrostatic study of the [4Fe-4S] cluster of adenosine-5'-phosphosulfate reductase from broken symmetry density functional calculations and extended X-ray absorption fine structure spectroscopy.

Authors:  Devayani P Bhave; Wen-Ge Han; Samuel Pazicni; James E Penner-Hahn; Kate S Carroll; Louis Noodleman
Journal:  Inorg Chem       Date:  2011-06-16       Impact factor: 5.165

7.  Epoxidation Catalyzed by the Nonheme Iron(II)- and 2-Oxoglutarate-Dependent Oxygenase, AsqJ: Mechanistic Elucidation of Oxygen Atom Transfer by a Ferryl Intermediate.

Authors:  Jikun Li; Hsuan-Jen Liao; Yijie Tang; Jhih-Liang Huang; Lide Cha; Te-Sheng Lin; Justin L Lee; Igor V Kurnikov; Maria G Kurnikova; Wei-Chen Chang; Nei-Li Chan; Yisong Guo
Journal:  J Am Chem Soc       Date:  2020-03-16       Impact factor: 15.419

8.  Spectroscopic Evidence for the Two C-H-Cleaving Intermediates of Aspergillus nidulans Isopenicillin N Synthase.

Authors:  Esta Tamanaha; Bo Zhang; Yisong Guo; Wei-Chen Chang; Eric W Barr; Gang Xing; Jennifer St Clair; Shengfa Ye; Frank Neese; J Martin Bollinger; Carsten Krebs
Journal:  J Am Chem Soc       Date:  2016-07-05       Impact factor: 15.419

9.  Di- and Trinuclear Mixed-Valence Copper Amidinate Complexes from Reduction of Iodine.

Authors:  Andrew C Lane; Charles L Barnes; William E Antholine; Denan Wang; Adam T Fiedler; Justin R Walensky
Journal:  Inorg Chem       Date:  2015-08-07       Impact factor: 5.165

Review 10.  Density functional theory.

Authors:  Maylis Orio; Dimitrios A Pantazis; Frank Neese
Journal:  Photosynth Res       Date:  2009 Nov-Dec       Impact factor: 3.573

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