Literature DB >> 35102895

Structural and spectroscopic characterization of CO inhibition of [NiFe]-hydrogenase from Citrobacter sp. S-77.

Takahiro Imanishi1, Koji Nishikawa1, Midori Taketa1, Katsuhiro Higuchi1, Hulin Tai2, Shun Hirota2, Hironobu Hojo3, Toru Kawakami3, Kiriko Hataguchi1, Kayoko Matsumoto1, Hideaki Ogata2, Yoshiki Higuchi1.   

Abstract

Hydrogenases catalyze the reversible oxidation of H2. Carbon monoxide (CO) is known to be a competitive inhibitor of O2-sensitive [NiFe]-hydrogenases. Although the activities of some O2-tolerant [NiFe]-hydrogenases are unaffected by CO, the partially O2-tolerant [NiFe]-hydrogenase from Citrobacter sp. S-77 (S77-HYB) is inhibited by CO. In this work, the CO-bound state of S77-HYB was characterized by activity assays, spectroscopic techniques and X-ray crystallography. Electron paramagnetic resonance spectroscopy showed a diamagnetic Ni2+ state, and Fourier-transform infrared spectroscopy revealed the stretching vibration of the exogenous CO ligand. The crystal structure determined at 1.77 Å resolution revealed that CO binds weakly to the nickel ion in the Ni-Fe active site of S77-HYB. These results suggest a positive correlation between O2 and CO tolerance in [NiFe]-hydrogenases.

Entities:  

Keywords:  Citrobacter sp. S-77; [NiFe]-hydrogenases; carbon monoxide; crystal structure; inhibitors; spectroscopy

Mesh:

Substances:

Year:  2022        PMID: 35102895      PMCID: PMC8805213          DOI: 10.1107/S2053230X22000188

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  40 in total

1.  Properties of purified hydrogenase from the particulate fraction of Desulfovibrio vulgaris, Miyazaki.

Authors:  T Yagi; K Kimura; H Daidoji; F Sakai; S Tamura
Journal:  J Biochem       Date:  1976-03       Impact factor: 3.387

Review 2.  [NiFe] and [FeFe] hydrogenases studied by advanced magnetic resonance techniques.

Authors:  Wolfgang Lubitz; Eduard Reijerse; Maurice van Gastel
Journal:  Chem Rev       Date:  2007-09-11       Impact factor: 60.622

3.  Purification and properties of hydrogenases of different origins.

Authors:  T Yagi; M Honya; N Tamiya
Journal:  Biochim Biophys Acta       Date:  1968-04-02

4.  Comprehensive reaction mechanisms at and near the Ni-Fe active sites of [NiFe] hydrogenases.

Authors:  Hulin Tai; Yoshiki Higuchi; Shun Hirota
Journal:  Dalton Trans       Date:  2018-03-26       Impact factor: 4.390

5.  Effect of 17O2 and 13CO on EPR spectra of nickel in hydrogenase from Chromatium vinosum.

Authors:  J W van der Zwaan; J M Coremans; E C Bouwens; S P Albracht
Journal:  Biochim Biophys Acta       Date:  1990-11-15

6.  Redox-dependent conformational changes of a proximal [4Fe-4S] cluster in Hyb-type [NiFe]-hydrogenase to protect the active site from O2.

Authors:  Noor Dina Muhd Noor; Hiroaki Matsuura; Koji Nishikawa; Hulin Tai; Shun Hirota; Jaehyun Kim; Jiyoung Kang; Masaru Tateno; Ki-Seok Yoon; Seiji Ogo; Shintaro Kubota; Yasuhito Shomura; Yoshiki Higuchi
Journal:  Chem Commun (Camb)       Date:  2018-10-30       Impact factor: 6.222

7.  Unusual ligand structure in Ni-Fe active center and an additional Mg site in hydrogenase revealed by high resolution X-ray structure analysis.

Authors:  Y Higuchi; T Yagi; N Yasuoka
Journal:  Structure       Date:  1997-12-15       Impact factor: 5.006

8.  X-ray crystal structure of the Fe-only hydrogenase (CpI) from Clostridium pasteurianum to 1.8 angstrom resolution.

Authors:  J W Peters; W N Lanzilotta; B J Lemon; L C Seefeldt
Journal:  Science       Date:  1998-12-04       Impact factor: 47.728

9.  Inhibition of the [NiFe] hydrogenase from Desulfovibrio vulgaris Miyazaki F by carbon monoxide: an FTIR and EPR spectroscopic study.

Authors:  Maria-Eirini Pandelia; Hideaki Ogata; Leslie J Currell; Marco Flores; Wolfgang Lubitz
Journal:  Biochim Biophys Acta       Date:  2009-11-17

Review 10.  X-ray Crystallography and Vibrational Spectroscopy Reveal the Key Determinants of Biocatalytic Dihydrogen Cycling by [NiFe] Hydrogenases.

Authors:  Yulia Ilina; Christian Lorent; Sagie Katz; Jae-Hun Jeoung; Seigo Shima; Marius Horch; Ingo Zebger; Holger Dobbek
Journal:  Angew Chem Int Ed Engl       Date:  2019-10-25       Impact factor: 15.336

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