| Literature DB >> 32571427 |
Younes Laidoudi1,2, Bernard Davoust1,2, Marie Varloud3, El Hadji Amadou Niang1,2, Florence Fenollar2,4, Oleg Mediannikov5,6.
Abstract
BACKGROUND: Dirofilaria immitis, D. repens and Acanthocheilonema reconditum are the main causative agents of zoonotic canine filariosis.Entities:
Keywords: Canine filariosis; Differential diagnosis; Dirofilaria immitis; Heartworm disease; Multiplex qPCRs
Mesh:
Substances:
Year: 2020 PMID: 32571427 PMCID: PMC7309989 DOI: 10.1186/s13071-020-04185-0
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 4.047
Primers and probes developed in this study
| System name | Target gene | Primer and probe name | Sequence (5′-3′) | Assay specificity |
|---|---|---|---|---|
| Pan-fil | qFil-28S-F | TTGTTTGAGATTGCAGCCCA | Filariae | |
| qFil-28S-P | 6FAM-CAAGTACCGTGAGGGAAAGT-TAMRA | |||
| qFil-28S-R | GTTTCCATCTCAGCGGTTTC | |||
| All-Wol | all.Wol.16S.301-F | TGGAACTGAGATACGGTCCAG | ||
| all.Wol.16S.347-P | 6FAM-AATATTGGACAATGGGCGAA-TAMRA | |||
| all.Wol.16S.478-R | GCACGGAGTTAGCCAGGACT | |||
| Triplex TaqMan | Fil.COI.749-F | CATCCTGAGGTTTATGTTATTATTTT | ||
| D.imm.COI.777-P | 6FAM-CGGTGTTTGGGATTGTTAGTG-TAMRA | |||
| D.rep.COI.871-P | 6VIC-TGCTGTTTTAGGTACTTCTGTTTGAG-TAMRA | |||
| A.rec.COI.866-P | Cy5-TGAATTGCTGTACTGGGAACT-BHQ3 | |||
| Fil.COI.914-R | CWGTATACATATGATGRCCYCA | |||
| Duplex Wol-Diro ftsZ qPCR-based system | WDiro.ftsZ.490-F | AAGCCATTTRGCTTYGAAGGTG | Endosymbiotic | |
| WDimm.ftsZ.523-P | 6FAM-CGTATTGCAGAGCTCGGATTA-TAMRA | |||
| WDrep.ftsZ.525-P | 6VIC-CATTGCAGAACTGGGACTGG-TAMRA | |||
| WDiro.ftsZ.600-R | AAACAAGTTTTGRTTTGGAATAACAAT | |||
| Duplex HWs | Hw.COI.723-F | TCAGCATTTGTTTTGGTTTTT | ||
| D.imm.COI.777-P | 6FAM-CGGTGTTTGGGATTGTTAGTG-TAMRA | |||
| A.vas.COI.813-P | 6VIC-TGACTGGGAAGAAGGAGGTG-TAMRA | |||
| Hw.COI.950-R | GCASTAAAATAAGYACGAGWATC |
PCR/sequencing primers developed in this study, their characteristics and conditions
| System name | Target gene | Primer name | Sequence (5′-3′) | Amplicon size (bp) | Tm (°C) | Specificity |
|---|---|---|---|---|---|---|
| Pan-fil | Fwd.957 | ATRGTTTATCAGTCTTTTTTTATTGG | 509 | 52.0 | Filariae | |
| Rwd.1465 | GCAATYCAAATAGAAGCAAAAGT | |||||
| Wol ftsZ PCR | Wol.ftsZ.363.f | GGRATGGGTGGTGGYACTGG | 560 | 59.5 | ||
| Wol.ftsZ.958.r | GCATCAACCTCAAAYARAGTCAT |
Abbreviation: Tm, melting temperature
Fig. 1Microfilariae in canine blood by modified Knottʼs test. aDirofilaria immitis microfilaria. bDirofilaria repens microfilaria. cDirofilaria immitis (black arrow) and D. repens (blue arrow) co-infection. dAcanthocheilonema reconditum microfilaria
Fig. 2Venn diagram depicting the distribution of positive samples for filariae and Wolbachia DNA. a Sequence typing method based on the cox1 gene of filariae. bWolbachia genotyping based on the ftsZ gene
Fig. 3Venn diagram depicting the distribution of positive samples detected by molecular and serological assays. a Molecular identification of filariae and associated Wolbachia using the multiplex approach. b Comparison between molecular diagnosis and heartworm antigen detection before and after heat pre-treatment of sera
Spearman correlation matrix depicting the strength of association between filaria and Wolbachia species within infected dogs
| Groups of | Filarial DNA | Single-species DNA of | Single-species DNA of | ||
|---|---|---|---|---|---|
| 0.506 (< 0.0001) | 0.284 (0.0002) | 0.565 (< 0.0001) | 0.447 (< 0.0001) | − 0.053 (0.490) | |
| Both | 0.313 (< 0.0001) | 0.175 (0.023) | 0.087 (0. 259) | 0.454 (< 0.0001) | − 0.059 (0.449) |
| Single-species DNA of | 0.478 (< 0.0001) | 0.244 (< 0.002) | 0.509 (< 0.0001) | 0.079 (0.381) | − 0.072 (0.335) |
| Single-species DNA of | 0.334 (< 0.0001) | − 0.024 (0.614) | − 0.037 (0.630) | 0.181 (0.019) | 0.104 (0.180) |
Note: The first number represents the correlation coefficient. Values close to zero reflect the absence of correlation. The associated P-values are in parentheses
Fig. 4Diagram showing the diagnostic procedure proposed in this study