Literature DB >> 32880770

Synthetic biology, combinatorial biosynthesis, and chemo‑enzymatic synthesis of isoprenoids.

Alexandra A Malico1, Miles A Calzini1, Anuran K Gayen1, Gavin J Williams2,3.   

Abstract

Isoprenoids are a large class of natural products with myriad applications as bioactive and commercial compounds. Their diverse structures are derived from the biosynthetic assembly and tailoring of their scaffolds, ultimately constructed from two C5 hemiterpene building blocks. The modular logic of these platforms can be harnessed to improve titers of valuable isoprenoids in diverse hosts and to produce new-to-nature compounds. Often, this process is facilitated by the substrate or product promiscuity of the component enzymes, which can be leveraged to produce novel isoprenoids. To complement rational enhancements and even re-programming of isoprenoid biosynthesis, high-throughput approaches that rely on searching through large enzymatic libraries are being developed. This review summarizes recent advances and strategies related to isoprenoid synthetic biology, combinatorial biosynthesis, and chemo-enzymatic synthesis, focusing on the past 5 years. Emerging applications of cell-free biosynthesis and high-throughput tools are included that culminate in a discussion of the future outlook and perspective of isoprenoid biosynthetic engineering.

Entities:  

Keywords:  Combinatorial biosynthesis; Hemiterpenes; Isoprenoids; Synthetic biology; Terpenes

Mesh:

Substances:

Year:  2020        PMID: 32880770      PMCID: PMC7666032          DOI: 10.1007/s10295-020-02306-3

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN: 1367-5435            Impact factor:   3.346


  181 in total

1.  Alteration of product formation by directed mutagenesis and truncation of the multiple-product sesquiterpene synthases delta-selinene synthase and gamma-humulene synthase.

Authors:  Dawn B Little; Rodney B Croteau
Journal:  Arch Biochem Biophys       Date:  2002-06-01       Impact factor: 4.013

2.  A whole-cell phenotypic screening platform for identifying methylerythritol phosphate pathway-selective inhibitors as novel antibacterial agents.

Authors:  Charles A Testa; L Jeffrey Johnson
Journal:  Antimicrob Agents Chemother       Date:  2012-07-09       Impact factor: 5.191

Review 3.  Squalene hopene cyclases: highly promiscuous and evolvable catalysts for stereoselective CC and CX bond formation.

Authors:  Stephan C Hammer; Per-Olof Syrén; Miriam Seitz; Bettina M Nestl; Bernhard Hauer
Journal:  Curr Opin Chem Biol       Date:  2013-02-26       Impact factor: 8.822

4.  C7-prenylation of tryptophanyl and O-prenylation of tyrosyl residues in dipeptides by an Aspergillus terreus prenyltransferase.

Authors:  Carsten Wunsch; Hui-Xi Zou; Uwe Linne; Shu-Ming Li
Journal:  Appl Microbiol Biotechnol       Date:  2014-08-16       Impact factor: 4.813

5.  Functional and Structural Characterization of a (+)-Limonene Synthase from Citrus sinensis.

Authors:  Benjamin R Morehouse; Ramasamy P Kumar; Jason O Matos; Sarah Naomi Olsen; Sonya Entova; Daniel D Oprian
Journal:  Biochemistry       Date:  2017-03-15       Impact factor: 3.162

6.  Synthesis of 11-carbon terpenoids in yeast using protein and metabolic engineering.

Authors:  Codruta Ignea; Marianna Pontini; Mohammed S Motawia; Massimo E Maffei; Antonios M Makris; Sotirios C Kampranis
Journal:  Nat Chem Biol       Date:  2018-11-14       Impact factor: 15.040

7.  Novel, versatile, and tightly regulated expression system for Escherichia coli strains.

Authors:  Young J Choi; Lyne Morel; Teffanie Le François; Denis Bourque; Lucie Bourget; Denis Groleau; Bernard Massie; Carlos B Míguez
Journal:  Appl Environ Microbiol       Date:  2010-06-18       Impact factor: 4.792

8.  Chemical Control in the Battle against Fidelity in Promiscuous Natural Product Biosynthesis: The Case of Trichodiene Synthase.

Authors:  Mudit Dixit; Michal Weitman; Jiali Gao; Dan T Major
Journal:  ACS Catal       Date:  2016-12-02       Impact factor: 13.084

9.  Genome Mining of Alkaloidal Terpenoids from a Hybrid Terpene and Nonribosomal Peptide Biosynthetic Pathway.

Authors:  Danielle A Yee; Thomas B Kakule; Wei Cheng; Mengbin Chen; Christine T Y Chong; Yang Hai; Leibniz F Hang; Yiu-Sun Hung; Nicholas Liu; Masao Ohashi; Ikechukwu C Okorafor; Yongxiang Song; Mancheng Tang; Zhuan Zhang; Yi Tang
Journal:  J Am Chem Soc       Date:  2020-01-03       Impact factor: 15.419

10.  Acceptor substrate determines donor specificity of an aromatic prenyltransferase: expanding the biocatalytic potential of NphB.

Authors:  Bryce P Johnson; Erin M Scull; Dustin A Dimas; Tejaswi Bavineni; Chandrasekhar Bandari; Andrea L Batchev; Eric D Gardner; Susan L Nimmo; Shanteri Singh
Journal:  Appl Microbiol Biotechnol       Date:  2020-03-18       Impact factor: 4.813

View more
  5 in total

Review 1.  Protein engineering for natural product biosynthesis and synthetic biology applications.

Authors:  Miles A Calzini; Alexandra A Malico; Melissa M Mitchler; Gavin J Williams
Journal:  Protein Eng Des Sel       Date:  2021-02-15       Impact factor: 1.952

2.  High Versatility of IPP and DMAPP Methyltransferases Enables Synthesis of C6 , C7 and C8 Terpenoid Building Blocks.

Authors:  Laura Drummond; Parab J Haque; Binbin Gu; Julia S Jung; Hendrik Schewe; Jeroen S Dickschat; Markus Buchhaupt
Journal:  Chembiochem       Date:  2022-06-07       Impact factor: 3.461

3.  Metabolic Engineering of the Isopentenol Utilization Pathway Enhanced the Production of Terpenoids in Chlamydomonas reinhardtii.

Authors:  Mei-Li Zhao; Wen-Sheng Cai; Si-Qi Zheng; Jia-Lin Zhao; Jun-Liang Zhang; Ying Huang; Zhang-Li Hu; Bin Jia
Journal:  Mar Drugs       Date:  2022-09-15       Impact factor: 6.085

Review 4.  Current Progress in the Chemoenzymatic Synthesis of Natural Products.

Authors:  Evan P Vanable; Laurel G Habgood; James D Patrone
Journal:  Molecules       Date:  2022-09-27       Impact factor: 4.927

Review 5.  Advances in Biosynthesis of Natural Products from Marine Microorganisms.

Authors:  Quan Zhou; Kinya Hotta; Yaming Deng; Rui Yuan; Shu Quan; Xi Chen
Journal:  Microorganisms       Date:  2021-12-10
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.