Literature DB >> 32435383

5,6-Dihydroxypyrimidine Scaffold to Target HIV-1 Nucleocapsid Protein.

Savina Malancona1, Mattia Mori2, Paola Fezzardi1, Marisabella Santoriello1, Andreina Basta1, Martina Nibbio1, Lesia Kovalenko3, Roberto Speziale1, Maria Rosaria Battista1, Antonella Cellucci1, Nadia Gennari1, Edith Monteagudo1, Annalise Di Marco1, Alessia Giannini4, Rajhans Sharma3, Manuel Pires3, Eleonore Real3, Maurizio Zazzi4, Maria Chiara Dasso Lang2, Davide De Forni5, Francesco Saladini4, Yves Mely3, Vincenzo Summa1, Steven Harper1, Maurizio Botta2.   

Abstract

The HIV-1 nucleocapsid (NC) protein is a small basic DNA and RNA binding protein that is absolutely necessary for viral replication and thus represents a target of great interest to develop new anti-HIV agents. Moreover, the highly conserved sequence offers the opportunity to escape the drug resistance (DR) that emerged following the highly active antiretroviral therapy (HAART) treatment. On the basis of our previous research, nordihydroguaiaretic acid 1 acts as a NC inhibitor showing moderate antiviral activity and suboptimal drug-like properties due to the presence of the catechol moieties. A bioisosteric catechol replacement approach led us to identify the 5-dihydroxypyrimidine-6-carboxamide substructure as a privileged scaffold of a new class of HIV-1 NC inhibitors. Hit validation efforts led to the identification of optimized analogs, as represented by compound 28, showing improved NC inhibition and antiviral activity as well as good ADME and PK properties.
Copyright © 2020 American Chemical Society.

Entities:  

Year:  2020        PMID: 32435383      PMCID: PMC7236274          DOI: 10.1021/acsmedchemlett.9b00608

Source DB:  PubMed          Journal:  ACS Med Chem Lett        ISSN: 1948-5875            Impact factor:   4.345


  31 in total

1.  Bioisosterism: A Rational Approach in Drug Design.

Authors:  George A. Patani; Edmond J. LaVoie
Journal:  Chem Rev       Date:  1996-12-19       Impact factor: 60.622

Review 2.  Role of HIV-1 nucleocapsid protein in HIV-1 reverse transcription.

Authors:  Judith G Levin; Mithun Mitra; Anjali Mascarenhas; Karin Musier-Forsyth
Journal:  RNA Biol       Date:  2010-11-01       Impact factor: 4.652

3.  Synthesis and Evaluation of Bifunctional Aminothiazoles as Antiretrovirals Targeting the HIV-1 Nucleocapsid Protein.

Authors:  Mattia Mori; Maria Chiara Dasso Lang; Francesco Saladini; Nastasja Palombi; Lesia Kovalenko; Davide De Forni; Barbara Poddesu; Laura Friggeri; Alessia Giannini; Savina Malancona; Vincenzo Summa; Maurizio Zazzi; Yves Mely; Maurizio Botta
Journal:  ACS Med Chem Lett       Date:  2018-12-07       Impact factor: 4.345

4.  Pharmacophore requirements for HIV-1 reverse transcriptase inhibitors that selectively "Freeze" the pre-translocated complex during the polymerization catalytic cycle.

Authors:  Cyrus M Lacbay; Michael Menni; Jean A Bernatchez; Matthias Götte; Youla S Tsantrizos
Journal:  Bioorg Med Chem       Date:  2018-02-14       Impact factor: 3.641

5.  Identification of novel 2-benzoxazolinone derivatives with specific inhibitory activity against the HIV-1 nucleocapsid protein.

Authors:  Elia Gamba; Mattia Mori; Lesia Kovalenko; Alessia Giannini; Alice Sosic; Francesco Saladini; Dan Fabris; Yves Mély; Barbara Gatto; Maurizio Botta
Journal:  Eur J Med Chem       Date:  2017-12-24       Impact factor: 6.514

6.  HIV-1 nucleocapsid protein activates transient melting of least stable parts of the secondary structure of TAR and its complementary sequence.

Authors:  Serena Bernacchi; Stoyl Stoylov; Etienne Piémont; Damien Ficheux; Bernard P Roques; Jean Luc Darlix; Yves Mély
Journal:  J Mol Biol       Date:  2002-03-29       Impact factor: 5.469

7.  4,5-dihydroxypyrimidine carboxamides and N-alkyl-5-hydroxypyrimidinone carboxamides are potent, selective HIV integrase inhibitors with good pharmacokinetic profiles in preclinical species.

Authors:  Vincenzo Summa; Alessia Petrocchi; Victor G Matassa; Cristina Gardelli; Ester Muraglia; Michael Rowley; Odalys Gonzalez Paz; Ralph Laufer; Edith Monteagudo; Paola Pace
Journal:  J Med Chem       Date:  2006-11-16       Impact factor: 7.446

8.  Discovery and synthesis of HIV integrase inhibitors: development of potent and orally bioavailable N-methyl pyrimidones.

Authors:  Cristina Gardelli; Emanuela Nizi; Ester Muraglia; Benedetta Crescenzi; Marco Ferrara; Federica Orvieto; Paola Pace; Giovanna Pescatore; Marco Poma; Maria Del Rosario Rico Ferreira; Rita Scarpelli; Carl F Homnick; Norihiro Ikemoto; Anna Alfieri; Maria Verdirame; Fabio Bonelli; Odalys Gonzalez Paz; Marina Taliani; Edith Monteagudo; Silvia Pesci; Ralph Laufer; Peter Felock; Kara A Stillmock; Daria Hazuda; Michael Rowley; Vincenzo Summa
Journal:  J Med Chem       Date:  2007-09-08       Impact factor: 7.446

9.  2-(2-Thienyl)-5,6-dihydroxy-4-carboxypyrimidines as inhibitors of the hepatitis C virus NS5B polymerase: discovery, SAR, modeling, and mutagenesis.

Authors:  Uwe Koch; Barbara Attenni; Savina Malancona; Stefania Colarusso; Immacolata Conte; Marcello Di Filippo; Steven Harper; Barbara Pacini; Claudia Giomini; Steven Thomas; Ilario Incitti; Licia Tomei; Raffaele De Francesco; Sergio Altamura; Victor G Matassa; Frank Narjes
Journal:  J Med Chem       Date:  2006-03-09       Impact factor: 7.446

10.  Identification and characterization of a new type of inhibitor against the human immunodeficiency virus type-1 nucleocapsid protein.

Authors:  Min-Jung Kim; Seon Hee Kim; Jung Ae Park; Kyung Lee Yu; Soo In Jang; Byung Soo Kim; Eun Soo Lee; Ji Chang You
Journal:  Retrovirology       Date:  2015-11-06       Impact factor: 4.602

View more
  3 in total

Review 1.  Synthesis and Applications of Nitrogen-Containing Heterocycles as Antiviral Agents.

Authors:  Tuyen N Tran; Maged Henary
Journal:  Molecules       Date:  2022-04-22       Impact factor: 4.927

2.  Inhibitory Effect of Lithospermic Acid on the HIV-1 Nucleocapsid Protein.

Authors:  Mattia Mori; Stefano Ciaco; Yves Mély; Anastasia Karioti
Journal:  Molecules       Date:  2020-11-20       Impact factor: 4.411

3.  Active Components from Cassia abbreviata Prevent HIV-1 Entry by Distinct Mechanisms of Action.

Authors:  Yue Zheng; Xian-Wen Yang; Dominique Schols; Mattia Mori; Bruno Botta; Andy Chevigné; Martin Mulinge; André Steinmetz; Jean-Claude Schmit; Carole Seguin-Devaux
Journal:  Int J Mol Sci       Date:  2021-05-10       Impact factor: 5.923

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.