Literature DB >> 29324338

Identification of novel 2-benzoxazolinone derivatives with specific inhibitory activity against the HIV-1 nucleocapsid protein.

Elia Gamba1, Mattia Mori2, Lesia Kovalenko3, Alessia Giannini4, Alice Sosic1, Francesco Saladini4, Dan Fabris5, Yves Mély6, Barbara Gatto7, Maurizio Botta2.   

Abstract

In this report, we present a new benzoxazole derivative endowed with inhibitory activity against the HIV-1 nucleocapsid protein (NC). NC is a 55-residue basic protein with nucleic acid chaperone properties, which has emerged as a novel and potential pharmacological target against HIV-1. In the pursuit of novel NC-inhibitor chemotypes, we performed virtual screening and in vitro biological evaluation of a large library of chemical entities. We found that compounds sharing a benzoxazolinone moiety displayed putative inhibitory properties, which we further investigated by considering a series of chemical analogues. This approach provided valuable information on the structure-activity relationships of these compounds and, in the process, demonstrated that their anti-NC activity could be finely tuned by the addition of specific substituents to the initial benzoxazolinone scaffold. This study represents the starting point for the possible development of a new class of antiretroviral agents targeting the HIV-1 NC protein.
Copyright © 2017 Elsevier Masson SAS. All rights reserved.

Entities:  

Keywords:  Benzoxazolinone; Electrospray ionization mass spectrometry; Fluorescence; HIV-1; Nucleocapsid protein; Virtual screening

Mesh:

Substances:

Year:  2017        PMID: 29324338      PMCID: PMC7092364          DOI: 10.1016/j.ejmech.2017.12.073

Source DB:  PubMed          Journal:  Eur J Med Chem        ISSN: 0223-5234            Impact factor:   6.514


  37 in total

Review 1.  Biophysical studies of the nucleic acid chaperone properties of the HIV-1 nucleocapsid protein.

Authors:  Julien Godet; Yves Mély
Journal:  RNA Biol       Date:  2010-11-01       Impact factor: 4.652

Review 2.  Role of HIV-1 nucleocapsid protein in HIV-1 reverse transcription.

Authors:  Judith G Levin; Mithun Mitra; Anjali Mascarenhas; Karin Musier-Forsyth
Journal:  RNA Biol       Date:  2010-11-01       Impact factor: 4.652

3.  Database clustering with a combination of fingerprint and maximum common substructure methods.

Authors:  Martin Stahl; Harald Mauser
Journal:  J Chem Inf Model       Date:  2005 May-Jun       Impact factor: 4.956

4.  Probing Mercaptobenzamides as HIV Inactivators via Nucleocapsid Protein 7.

Authors:  Mrinmoy Saha; Michael T Scerba; Nathaniel I Shank; Tracy L Hartman; Caitlin A Buchholz; Robert W Buckheit; Stewart R Durell; Daniel H Appella
Journal:  ChemMedChem       Date:  2017-04-25       Impact factor: 3.466

5.  Conformer generation with OMEGA: algorithm and validation using high quality structures from the Protein Databank and Cambridge Structural Database.

Authors:  Paul C D Hawkins; A Geoffrey Skillman; Gregory L Warren; Benjamin A Ellingson; Matthew T Stahl
Journal:  J Chem Inf Model       Date:  2010-04-26       Impact factor: 4.956

6.  Identification of HIV-1 inhibitors targeting the nucleocapsid protein.

Authors:  Sebastian Breuer; Max W Chang; Jinyun Yuan; Bruce E Torbett
Journal:  J Med Chem       Date:  2012-05-24       Impact factor: 7.446

7.  Nucleocapsid Annealing-Mediated Electrophoresis (NAME) assay allows the rapid identification of HIV-1 nucleocapsid inhibitors.

Authors:  Alice Sosic; Marta Cappellini; Matteo Scalabrin; Barbara Gatto
Journal:  J Vis Exp       Date:  2015-01-19       Impact factor: 1.355

8.  Identification of a novel chalcone derivative that inhibits Notch signaling in T-cell acute lymphoblastic leukemia.

Authors:  Mattia Mori; Luca Tottone; Deborah Quaglio; Nadezda Zhdanovskaya; Cinzia Ingallina; Marisa Fusto; Francesca Ghirga; Giovanna Peruzzi; Maria Elisa Crestoni; Fabrizio Simeoni; Francesca Giulimondi; Claudio Talora; Bruno Botta; Isabella Screpanti; Rocco Palermo
Journal:  Sci Rep       Date:  2017-05-19       Impact factor: 4.379

Review 9.  Nucleocapsid Protein: A Desirable Target for Future Therapies Against HIV-1.

Authors:  Mattia Mori; Lesia Kovalenko; Sébastien Lyonnais; Danny Antaki; Bruce E Torbett; Maurizio Botta; Gilles Mirambeau; Yves Mély
Journal:  Curr Top Microbiol Immunol       Date:  2015       Impact factor: 4.291

10.  Inhibitory effects of archetypical nucleic acid ligands on the interactions of HIV-1 nucleocapsid protein with elements of Psi-RNA.

Authors:  Kevin B Turner; Nathan A Hagan; Daniele Fabris
Journal:  Nucleic Acids Res       Date:  2006-03-06       Impact factor: 16.971

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  6 in total

1.  Synthesis and Evaluation of Bifunctional Aminothiazoles as Antiretrovirals Targeting the HIV-1 Nucleocapsid Protein.

Authors:  Mattia Mori; Maria Chiara Dasso Lang; Francesco Saladini; Nastasja Palombi; Lesia Kovalenko; Davide De Forni; Barbara Poddesu; Laura Friggeri; Alessia Giannini; Savina Malancona; Vincenzo Summa; Maurizio Zazzi; Yves Mely; Maurizio Botta
Journal:  ACS Med Chem Lett       Date:  2018-12-07       Impact factor: 4.345

2.  A Class of Potent Inhibitors of the HIV-1 Nucleocapsid Protein Based on Aminopyrrolic Scaffolds.

Authors:  Stefano Ciaco; Nicolas Humbert; Eléonore Real; Christian Boudier; Oscar Francesconi; Stefano Roelens; Cristina Nativi; Carole Seguin-Devaux; Mattia Mori; Yves Mély
Journal:  ACS Med Chem Lett       Date:  2020-01-27       Impact factor: 4.345

3.  5,6-Dihydroxypyrimidine Scaffold to Target HIV-1 Nucleocapsid Protein.

Authors:  Savina Malancona; Mattia Mori; Paola Fezzardi; Marisabella Santoriello; Andreina Basta; Martina Nibbio; Lesia Kovalenko; Roberto Speziale; Maria Rosaria Battista; Antonella Cellucci; Nadia Gennari; Edith Monteagudo; Annalise Di Marco; Alessia Giannini; Rajhans Sharma; Manuel Pires; Eleonore Real; Maurizio Zazzi; Maria Chiara Dasso Lang; Davide De Forni; Francesco Saladini; Yves Mely; Vincenzo Summa; Steven Harper; Maurizio Botta
Journal:  ACS Med Chem Lett       Date:  2020-03-19       Impact factor: 4.345

4.  Design, synthesis, molecular modeling and biological evaluation of novel Benzoxazole-Benzamide conjugates via a 2-Thioacetamido linker as potential anti-proliferative agents, VEGFR-2 inhibitors and apoptotic inducers.

Authors:  Ibrahim H Eissa; Radwan El-Haggar; Mohammed A Dahab; Marwa F Ahmed; Hazem A Mahdy; Reem I Alsantali; Alaa Elwan; Nicolas Masurier; Samar S Fatahala
Journal:  J Enzyme Inhib Med Chem       Date:  2022-12       Impact factor: 5.756

5.  Synthesis of distal and proximal fleximer base analogues and evaluation in the nucleocapsid protein of HIV-1.

Authors:  Therese Ku; Natalie Lopresti; Matthew Shirley; Mattia Mori; Jan Marchant; Xiao Heng; Maurizio Botta; Michael F Summers; Katherine L Seley-Radtke
Journal:  Bioorg Med Chem       Date:  2019-05-15       Impact factor: 3.641

6.  Inhibitory Effect of Lithospermic Acid on the HIV-1 Nucleocapsid Protein.

Authors:  Mattia Mori; Stefano Ciaco; Yves Mély; Anastasia Karioti
Journal:  Molecules       Date:  2020-11-20       Impact factor: 4.411

  6 in total

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