Literature DB >> 34214143

The emerging role of biosynthetic gene clusters in plant defense and plant interactions.

Guy Polturak1, Anne Osbourn1.   

Abstract

Entities:  

Year:  2021        PMID： 34214143      PMCID： PMC8253395          DOI： 10.1371/journal.ppat.1009698

Source DB:  PubMed          Journal:  PLoS Pathog        ISSN： 1553-7366            Impact factor:   6.823


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  74 in total

1.  Phytochemistry meets genome analysis, and beyond.

Authors:  Richard A Dixon; Dieter Strack
Journal:  Phytochemistry       Date:  2003-03       Impact factor: 4.072

2.  Strategies for the discovery of new natural products by genome mining.

Authors:  Malek Zerikly; Gregory L Challis
Journal:  Chembiochem       Date:  2009-03-02       Impact factor: 3.164

3.  Secondary metabolites in plant defence mechanisms.

Authors:  Richard N Bennett; Roger M Wallsgrove
Journal:  New Phytol       Date:  1994-08       Impact factor: 10.151

4.  Genomic clustering of cyanogenic glucoside biosynthetic genes aids their identification in Lotus japonicus and suggests the repeated evolution of this chemical defence pathway.

Authors:  Adam M Takos; Camilla Knudsen; Daniela Lai; Rubini Kannangara; Lisbeth Mikkelsen; Mohammed S Motawia; Carl E Olsen; Shusei Sato; Satoshi Tabata; Kirsten Jørgensen; Birger L Møller; Fred Rook
Journal:  Plant J       Date:  2011-07-26       Impact factor: 6.417

5.  Selection of a subspecies-specific diterpene gene cluster implicated in rice disease resistance.

Authors:  Chuansong Zhan; Long Lei; Zixin Liu; Shen Zhou; Chenkun Yang; Xitong Zhu; Hao Guo; Feng Zhang; Meng Peng; Meng Zhang; Yufei Li; Zixin Yang; Yangyang Sun; Yuheng Shi; Kang Li; Ling Liu; Shuangqian Shen; Xuyang Wang; Jiawen Shao; Xinyu Jing; Zixuan Wang; Yi Li; Tomasz Czechowski; Morifumi Hasegawa; Ian Graham; Takayuki Tohge; Lianghuan Qu; Xianqing Liu; Alisdair R Fernie; Ling-Ling Chen; Meng Yuan; Jie Luo
Journal:  Nat Plants       Date:  2020-12-07       Impact factor: 15.793

6.  A Papaver somniferum 10-gene cluster for synthesis of the anticancer alkaloid noscapine.

Authors:  Thilo Winzer; Valeria Gazda; Zhesi He; Filip Kaminski; Marcelo Kern; Tony R Larson; Yi Li; Fergus Meade; Roxana Teodor; Fabián E Vaistij; Carol Walker; Tim A Bowser; Ian A Graham
Journal:  Science       Date:  2012-05-31       Impact factor: 47.728

7.  The opium poppy genome and morphinan production.

Authors:  Li Guo; Thilo Winzer; Xiaofei Yang; Yi Li; Zemin Ning; Zhesi He; Roxana Teodor; Ying Lu; Tim A Bowser; Ian A Graham; Kai Ye
Journal:  Science       Date:  2018-08-30       Impact factor: 47.728

8.  A metabolic gene cluster in Lotus japonicus discloses novel enzyme functions and products in triterpene biosynthesis.

Authors:  Afrodite Krokida; Costas Delis; Katrin Geisler; Constantine Garagounis; Daniela Tsikou; Luis M Peña-Rodríguez; Dimitra Katsarou; Ben Field; Anne E Osbourn; Kalliope K Papadopoulou
Journal:  New Phytol       Date:  2013-07-26       Impact factor: 10.151

9.  Subtelomeric assembly of a multi-gene pathway for antimicrobial defense compounds in cereals.

Authors:  Yan Li; Aymeric Leveau; Qiang Zhao; Qi Feng; Hengyun Lu; Jiashun Miao; Zheyong Xue; Azahara C Martin; Eva Wegel; Jing Wang; Anastasia Orme; Maria-Dolores Rey; Miroslava Karafiátová; Jan Vrána; Burkhard Steuernagel; Ryan Joynson; Charlotte Owen; James Reed; Thomas Louveau; Michael J Stephenson; Lei Zhang; Xuehui Huang; Tao Huang; Danling Fan; Congcong Zhou; Qilin Tian; Wenjun Li; Yiqi Lu; Jiaying Chen; Yan Zhao; Ying Lu; Chuanrang Zhu; Zhenhua Liu; Guy Polturak; Rebecca Casson; Lionel Hill; Graham Moore; Rachel Melton; Neil Hall; Brande B H Wulff; Jaroslav Doležel; Tim Langdon; Bin Han; Anne Osbourn
Journal:  Nat Commun       Date:  2021-05-07       Impact factor: 17.694

Review 10.  Genetic and epigenetic control of gene expression by CRISPR-Cas systems.

Authors:  Albert Lo; Lei Qi
Journal:  F1000Res       Date:  2017-05-25
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  9 in total

1.  From Genome Mining to Protein Engineering: A Structural Bioinformatics Route.

Authors:  Derek J Smith
Journal:  Methods Mol Biol       Date:  2023

2.  Mining of the Catharanthus roseus Genome Leads to Identification of a Biosynthetic Gene Cluster for Fungicidal Sesquiterpenes.

Authors:  Jincai Liang; Tianyue An; Jian-Xun Zhu; Shan Chen; Jian-Hua Zhu; Reuben J Peters; Rongmin Yu; Jiachen Zi
Journal:  J Nat Prod       Date:  2021-10-13       Impact factor: 4.803

3.  Pathogen-induced biosynthetic pathways encode defense-related molecules in bread wheat.

Authors:  Guy Polturak; Martin Dippe; Michael J Stephenson; Rajesh Chandra Misra; Charlotte Owen; Ricardo H Ramirez-Gonzalez; John F Haidoulis; Henk-Jan Schoonbeek; Laetitia Chartrain; Philippa Borrill; David R Nelson; James K M Brown; Paul Nicholson; Cristobal Uauy; Anne Osbourn
Journal:  Proc Natl Acad Sci U S A       Date:  2022-04-11       Impact factor: 12.779

Review 4.  Natural Composition and Biosynthetic Pathways of Alkaloids in Medicinal Dendrobium Species.

Authors:  Cheng Song; Jingbo Ma; Guohui Li; Haoyu Pan; Yanfang Zhu; Qing Jin; Yongping Cai; Bangxing Han
Journal:  Front Plant Sci       Date:  2022-05-06       Impact factor: 6.627

Review 5.  Unlocking plant metabolic diversity: A (pan)-genomic view.

Authors:  Xuan Zhou; Zhenhua Liu
Journal:  Plant Commun       Date:  2022-01-20

Review 6.  Plant biosynthetic gene clusters in the context of metabolic evolution.

Authors:  Samuel J Smit; Benjamin R Lichman
Journal:  Nat Prod Rep       Date:  2022-07-20       Impact factor: 15.111

7.  A gene cluster in Ginkgo biloba encodes unique multifunctional cytochrome P450s that initiate ginkgolide biosynthesis.

Authors:  Victor Forman; Dan Luo; Fernando Geu-Flores; René Lemcke; David R Nelson; Sotirios C Kampranis; Dan Staerk; Birger Lindberg Møller; Irini Pateraki
Journal:  Nat Commun       Date:  2022-09-01       Impact factor: 17.694

8.  Herbgenomics: Decipher molecular genetics of medicinal plants.

Authors:  Wei Sun; Zhichao Xu; Chi Song; Shilin Chen
Journal:  Innovation (Camb)       Date:  2022-09-14

Review 9.  Multi-Omics-Based Discovery of Plant Signaling Molecules.

Authors:  Fei Luo; Zongjun Yu; Qian Zhou; Ancheng Huang
Journal:  Metabolites       Date:  2022-01-13
  9 in total

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