| Literature DB >> 32390762 |
Zhiqian Gu1,2, Shaokun Wu1,2, Jingnan Wang1,2, Shoujun Zhao1,2.
Abstract
BACKGROUND: Osteosarcoma (OS) is one of the most aggressive malignancies with mortality rate worldwide. Accumulating evidence has revealed that long noncoding RNAs (lncRNAs) exert important functions in regulation of cancer initiation and progression. Recently, long intergenic non-protein coding RNA 1419 (LINC01419) has been reported to function as an oncogene in several cancers. However, its role in OS has not been explored yet.Entities:
Keywords: LINC01419; Osteosarcoma; PDRG1; miR-519a-3p
Year: 2020 PMID: 32390762 PMCID: PMC7201774 DOI: 10.1186/s12935-020-01203-0
Source DB: PubMed Journal: Cancer Cell Int ISSN: 1475-2867 Impact factor: 5.722
Sequences of primers used in qRT-PCR and of plasmids applied in cell transfection
| Genes | Sequences of primers (5′–3′) |
|---|---|
| LINC01419 | F: AGAACTGAGGTCCACTTTCTGG |
| R: GGTCCTTTGTCTGCAACGA | |
| miR-519a-3p | F: AAAGTGCATCCTTTTAGAGTGTGG |
| R: CTCTACAGCTATATTGCCAGCCAC | |
| miR-519c-3p | F: AAAGTGCATCTTTTTAGAGGATCG |
| R: CTCTACAGCTATATTGCCAGCCAC | |
| miR-519b-3p | F: AAAGTGCATCCTTTTAGAGGTTCC |
| R: CTCTACAGCTATATTGCCAGCCAC | |
| miR-3121-3p | F: TAAATAGAGTAGGCAAAGGACAGCC |
| R: CTCTACAGCTATATTGCCAGCCAC | |
| PDRG1 | F: TGAGCCACAAAGCACCAA |
| R: TCACATGGACCCTGAGCA | |
| GAPDH | F: CATCCTGGGCTACACTGAGC |
| R: AGTGGTCGTTGAGGGCAA | |
| U6 | F: AAAGCAAATCATCGGACGACC |
| R: GTACAACACATTGTTTCCTCGGA |
Fig. 1LINC01419 acts as an oncogene in OS. a LINC01419 expression was assessed in OS cell lines (143B, U2OS and Saos-2) and human normal osteoblast (hFOB1.19) by using qRT-PCR analysis. b Silencing efficiency of LINC01419 was evaluated in U2OS and Saos-2 cells by qRT-PCR. c–d. Colony formation assay and EdU assay (scale bar = 200 μm) were conducted to evaluate the proliferation of U2OS and Saos-2 cells transfected with sh-LINC01419#1/2 or sh-NC. e–f. U2OS and Saos-2 cell apoptosis was examined by JC-1 assay (scale bar = 200 μm) and TUNEL assay (scale bar = 200 μm) in sh-LINC01419 group or sh-NC group. g–h. U2OS and Saos-2 cells migration and invasion were illustrated by transwell assay (scale bar = 200 μm) with the transfection sh-LINC01419 or sh-NC. i–j. IF (scale bar = 50 μm) and western blot assay were conducted to investigate the EMT process of sh-LINC01419 or sh-NC transfected U2OS and Saos-2 cells. *P < 0.05, **P < 0.01
Fig. 2LINC01419 sponges miR-519a-3p in OS. a–b FISH assay (scale bar = 50 μm) and subcellular fractionation assay were implemented to determine the location of LINC01419 in OS cells. c Four miRNAs that bound to LINC01419 were screened out from ENCORI database. d MS2-RIP assay was conducted to assess the binding of 4 mirnas to linc01419. e Expressions of miR-519a-3p and miR-519c-3p in OS cells were investigated via qRT-PCR. f Binding sites between LINC01419 and miR-519a-3p were predicted by ENCORI database. g RNA pull down assay was implemented to evaluate the interaction between LINC01419 and miR-519a-3p in OS cells. h Overexpression efficiency of miR-519a-3p in U2OS and Saos-2 cells was examined by qRT-PCR. i Luciferase reporter assay verified the binding of LINC01419 to miR-519a-3p in U2OS and Saos-2 cells. **P < 0.01
Fig. 3PDRG1 is targeted by miR-519a-3p and promotes OS cell progression. a Venn diagram was generated to show the potential mRNAs targeted by miR-519a-3p. b The expressions of mRNAs regulated by LINC01419 or miR-519a-3p were shown by qRT-PCR. c qRT-PCR analysis was conducted to estimate the expression of PDRG1 in OS cells. d Binding site between PDRG1 and miR-519a-3p was presented. e–f. RNA pull down assay and luciferase reporter assay assessed the combination of PDRG1 with miR-519a-3p. g Inhibition efficiency of PDRG1 was detected by qRT-PCR. h–i. Effect of PDRG1 silencing on U2OS and Saos-2 cell proliferation was evaluated by colony formation and EdU assays. j–k. The apoptosis of U2OS and Saos-2 cells was examined by JC-1 and TUNEL assays with or without PDRG1 silence. l–m. The migration and invasion in indicated cells were tested by transwell assay. n. IF assay (scale bar = 50 μm) was performed to investigate EMT process in U2OS and Saos-2 cells upon PDRG1 knockdown. **P < 0.01
Fig. 4LINC01419 contributes to malignant phenotypes of OS cells through targeting miR-519a-3p/PDRG1 axis. a Effect of LINC01419 depletion or miR-519a-3p upregulation on PDRG1 expression was estimated by qRT-PCR. b–c qRT-PCR analysis was used to determine the transfection efficiency of miR-519a-3p inhibitor or pcDNA3.1-PDRG1. d–e. Cell proliferation in each group was evaluated by colony formation and EdU assays. f–g. JC-1 and TUNEL assays were carried out to assess cell apoptosis in each group. h–i. The motility of cells under indicated transfections was detected by transwell assay. j–k. IF assay (scale bar = 50 μm) and western blot analysis were employed to test changes on EMT process in each group. **P < 0.01