| Literature DB >> 32368610 |
Mohammad Hazzaz Bin Kabir1,2, Yongmei Han1, Seung-Hun Lee1,3, Arifin Budiman Nugraha1, Frances Recuenco1, Fumi Murakoshi4, Xuenan Xuan1, Kentaro Kato1,5.
Abstract
Cryptosporidium is an opportunistic parasite that has been reported in >30 avian hosts worldwide, however, there is no information regarding Cryptosporidium spp. in poultry in Bangladesh. Accordingly, we investigated the prevalence of Cryptosporidium spp. in poultry at open live bird markets in Bangladesh. A total of 197 samples were randomly collected from poultry at open live bird markets in Bangladesh and screened for the detection of Cryptosporidium. Initial microscopic examination revealed Cryptosporidium spp. was observed in 19.8% (39/197) of the poultry specimens. Subsequent nested PCR targeting the 18S rRNA gene revealed that 15.7% (31/197) of the samples were Cryptosporidium positive. Of these 31 samples, 17 were Cryptosporidium baileyi (8.7%), 12 were Cryptosporidium meleagridis (6.0%), and 2 were Cryptosporidium parvum (1.0%). Nucleotide sequence analysis of the GP60 gene of the C. meleagridis revealed that two subtypes (IIIbA21G1R1 and IIIbA23G1R1), which were found in broiler, native and sonali chickens and a pigeon, matched those previously reported in humans and poultry. We identified two novel subtypes (IIIbA21G2R1 and IIIbA20G2R1) in sonali chickens, a broiler chicken and a layer chicken. We also amplified the GP60 gene of C. parvum and found two subtypes (IIaA11G2R1 and IIaA13G2R1) in a sonali and a broiler chicken that were previously reported in calf. These findings suggest that poultry can be a source of cryptosporidial infections for humans and animals in Bangladesh. This is the first molecular investigation of Cryptosporidium genotypes and subtypes in poultry at open live bird markets in Bangladesh.Entities:
Keywords: Bangladesh; Cryptosporidium; Live bird markets; PCR-based sequencing; Phylogenetic analyses; Poultry
Year: 2020 PMID: 32368610 PMCID: PMC7184206 DOI: 10.1016/j.onehlt.2020.100122
Source DB: PubMed Journal: One Health ISSN: 2352-7714
Fig. 1Microscopic observation of Cryptosporidium oocysts. Oocysts were observed by using the Ziehl-Neelsen staining method under a microscope.
Positive rates of Cryptosporidium species in poultry.
| Poultry spp. | No. sample | No. microscopy positive (%) | No. nested PCR positive (%) |
|---|---|---|---|
| Chicken (sonalis) | 93 | 19 (20.4) | 17 (18.3) |
| Chicken (Broilers) | 80 | 15 (18.8) | 9 (11.3) |
| Chicken (layers) | 12 | 2 (16.7) | 2 (16.7) |
| Chicken (natives) | 8 | 1 (12.5) | 1 (12.5) |
| Pigeon | 4 | 2 (50) | 2 (50) |
| Total | 197 | 39 (19.8) | 31 (15.7) |
Detection of Cryptosporidium spp. in poultry.
| Poultry spp. | No. samples | No. positive (%) | Total positive (%) | 95% CI | ||
|---|---|---|---|---|---|---|
| Chicken (sonalis) | 93 | 11 (11.9) | 5 (5.4) | 1 (1) | 17 (18.3) | 11.8–27.4 |
| Chicken (broilers) | 80 | 4 (5) | 4 (5) | 1 (1.3) | 9 (11.3) | 6.03–20.02 |
| Chicken (layers) | 12 | 1 (8.4) | 1 (8.4) | 0 (0) | 2 (16.7) | 4.7–44.8 |
| Chicken (natives) | 8 | 0 (0) | 1 (12.5) | 0 (0) | 1 (12.5) | 2.3–47.1 |
| Pigeons | 4 | 1 (25) | 1 (25) | 0 (0) | 2 (50) | 15–85 |
| Total | 197 | 17 (8.7) | 12 (6.0) | 2 (1.0) | 31 (15.7) | 11.4–21.5 |
Confidence interval.
Fig. 2Phylogenetic tree based on partial sequences of the 18S rRNA genes for Cryptosporidium spp. A Phylogenetic tree was constructed without nucleotide gaps using the Maximum Likelihood analysis with 1000 replicates based on the T92 + I model [40]. Species, host, region of identification, and GenBank accession number are included. Newly obtained sequences are bolded. The Plasmodium falciparum sequence was used as an out-group. Only bootstrap values >50% from 1000 pseudo-replicates are shown. Evolutionary analyses were conducted in MEGA7 [21].
Fig. 3Phylogenetic tree based on partial sequences of the GP60 genes for Cryptosporidium spp. Phylogenetic tree was constructed without nucleotide gaps using the Maximum Likelihood analysis with 1000 replicates based on the Tamura-Nei model [41]. Subtypes, host, region of identification, and GenBank accession number are included. Newly obtained sequences are bolded. C. meleagridis and C. parvum were subtyped in this study by use of reference sequences and observations. Only bootstrap values >50% from 1000 pseudo-replicates are shown. Evolutionary analyses were conducted in MEGA7 [21].