| Literature DB >> 32365566 |
Ya-Yen Yu1,2, Hui-Ling Chiou3,4, Shih-Ming Tsao5,6,7, Chen-Cheng Huang8, Chih-Yun Lin9, Chia-Yi Lee10, Thomas Chang-Yao Tsao5,6, Shun-Fa Yang1,11, Yi-Wen Huang1,9.
Abstract
Carbonic anhydrase 9 (CA9) plays a vital role in lung cancer progression. The current study explored the effect of CA9 gene polymorphisms and the epidermal growth factor receptor (EGFR) mutations on the clinicopathological characters of lung adenocarcinoma. In this study, three loci of CA9 single nucleotide polymorphism (SNP) (rs2071676 A>G, rs3829078 A>G, and rs1048638 C>A) were genotyped using the TaqMan allelic discrimination method in 193 EGFR wild type individuals and 281 EGFR mutation subjects. After adjusting for age, gender, and cigarette smoking status in logistic regression, all three CA9 SNPs illustrated a non-significant difference for the distribution between the EGFR wild type group and EGFR mutation group. Nevertheless, a significantly lower rate of CA9 SNP rs2071676 AG (adjusted odds ratio (AOR): 0.40, 95% confidence interval (CI): 0.16-0.95, p = 0.039) and AG+GG (AOR: 0.43, 95% CI: 0.18-0.98, p = 0.046) were found in the male population with L858R EGFR mutation compared to men with EGFR wild type. In addition, the CA9 SNP rs2071676 AG+GG genotype were significantly correlated to the lower tumor stage of lung adenocarcinoma in the whole study population (p = 0.044) and EGFR wild type individuals (p = 0.033). For the male population, the presence of CA9 SNP rs2071676 AG+GG genotype was also correlated to a lower tumor stage (p = 0.037) and fewer lymph node invasion (p = 0.003) in those with EGFR wild type. In conclusion, the existence of CA9 SNP rs2071676 is associated with the rate of EGFR L858R mutation in males. Furthermore, the CA9 SNP rs2071676 is correlated to lower tumor stage and lower risk for developing lymph node metastasis in lung adenocarcinoma, mainly in the EGFR wild type.Entities:
Keywords: carbonic anhydrase 9; epidermal growth factor receptor; lung adenocarcinoma; lymph node; single nucleotide polymorphism; tumor stage
Year: 2020 PMID: 32365566 PMCID: PMC7277165 DOI: 10.3390/diagnostics10050266
Source DB: PubMed Journal: Diagnostics (Basel) ISSN: 2075-4418
Demographics and clinical characteristics of 474 patients in lung adenocarcinoma with epidermal growth factor receptor mutation status.
| Variable | EGFR Wild Type | EGFR Mutation | |
|---|---|---|---|
|
| |||
| Mean ± SD | 65.31 ± 13.46 | 64.83 ± 12.74 | |
| <65 | 97 (50.3%) | 143 (50.9%) | |
| ≥65 | 96 (49.7%) | 138 (49.1%) | |
|
| |||
| Male | 118 (61.1%) | 95 (33.8%) | |
| Female | 75 (38.9%) | 186 (66.2%) | |
|
| |||
| Never-smoker | 88 (45.6%) | 224 (79.7%) | |
| Ever-smoker | 105 (54.4%) | 57 (20.3%) | |
|
| |||
| I + II | 47 (24.4%) | 73 (26.0%) | |
| III + IV | 146 (75.6%) | 208 (74.0%) | |
|
| |||
| T1 + T2 | 100 (51.8%) | 158 (56.2%) | |
| T3 + T4 | 93 (48.2%) | 123 (43.8%) | |
|
| |||
| Negative | 57 (29.5%) | 83 (29.5%) | |
| Positive | 136 (70.5%) | 198 (70.5%) | |
|
| |||
| Negative | 90 (46.6%) | 119 (42.3%) | |
| Positive | 103 (53.4%) | 162 (57.7%) | |
|
| |||
| Well | 16 (8.3%) | 31 (11.0%) | |
| Moderately | 123 (63.7%) | 221 (78.6%) | |
| Poorly | 54 (28.0%) | 29 (10.3%) |
EGFR: epidermal growth factor receptor; SD: standard deviation; N: number.
Distribution frequency of carbonic anhydrase 9 genotypes of patients with lung adenocarcinoma and multiple logistic regression analysis of epidermal growth factor receptor mutation association.
| SNP Genotypes | Wild Type | EGFR Mutation (All) | L858R | Exon 19 in-Frame Deletion | |||
|---|---|---|---|---|---|---|---|
| ( | AOR # | ( | AOR # | ( | AOR # | ||
|
| |||||||
| AA | 37 (19.2%) | 65 (23.1%) | 1.00 | 31 (22.0%) | 1.00 | 30 (24.6%) | 1.00 |
| AG | 115 (59.6%) | 147 (52.3%) | 0.82 (0.50–1.36) | 68 (48.2%) | 0.76 (0.41–1.42) | 67 (54.9%) | 0.87 (0.48–1.59) |
| GG | 41 (21.2%) | 69 (24.6%) | 0.97 (0.53–1.77) | 42 (29.8%) | 1.26 (0.62–2.58) | 25 (20.5%) | 0.79 (0.38–1.64) |
| AG + GG | 156 (80.8%) | 216 (76.9%) | 0.86 (0.53–1.40) | 110 (78.0%) | 0.89 (0.50–1.61) | 92 (75.4%) | 0.85 (0.47–1.51) |
|
| |||||||
| AA | 172 (89.1%) | 258 (91.8%) | 1.00 | 125 (88.7%) | 1.00 | 115 (94.3%) | 1.00 |
| AG | 21 (10.9%) | 23 (8.2%) | 0.70 (0.36–1.35) | 16 (11.3%) | 0.88 (0.41–1.86) | 7 (5.7%) | 0.52 (0.21–1.31) |
| GG | 0 (0 %) | 0 (0 %) | --- | 0 (0 %) | --- | 0 (0 %) | --- |
| AG + GG | 21 (10.9%) | 23 (8.2%) | 0.70 (0.36–1.35) | 16 (11.3%) | 0.88 (0.41–1.86) | 7 (5.7%) | 0.52 (0.21–1.31) |
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| CC | 173 (89.6%) | 239 (85.1%) | 1.00 | 122 (86.5%) | 1.00 | 102 (83.6%) | 1.00 |
| CA | 20 (10.4%) | 37 (13.2%) | 1.61 (0.86–3.01) | 17 (12.1%) | 1.58 (0.72–3.45) | 17 (13.9%) | 1.84 (0.88–3.87) |
| AA | 0 (0.0%) | 5 (1.7%) | --- | 2 (1.4%) | --- | 3 (2.5%) | --- |
| CA + AA | 20 (10.4%) | 42 (14.9%) | 1.76 (0.96–3.25) | 19 (13.5%) | 1.74 (0.82–3.73) | 20 (16.4%) | 2.03 (0.99–4.15) |
SNP: single nucleotide polymorphism; EGFR: epidermal growth factor receptor; N: number; AOR: adjusted odds ratio; CI: confidence interval; The AORs with 95% CIs were estimated by multiple logistic regression models after controlling for age, gender and cigarette smoking status.
Distribution frequency of carbonic anhydrase 9 genotypes of 213 male patients with lung adenocarcinoma and multiple logistic regression analysis of epidermal growth factor receptor mutation association.
| SNP Genotypes | Wild Type | EGFR Mutation (All) | L858R | Exon 19 in-Frame Deletion | |||
|---|---|---|---|---|---|---|---|
| ( | AOR # | ( | AOR # | ( | AOR # | ||
|
| |||||||
| AA | 20 (16.9%) | 26 (27.4%) | 1.00 | 12 (32.4%) | 1.00 | 13 (26.5%) | 1.00 |
| AG | 76 (64.4%) | 54 (56.8%) | 0.61 (0.30–1.24) | 18 (48.6%) | 0.40 (0.16–0.95) *,a | 30 (61.2%) | 0.69 (0.29–1.63) |
| GG | 22 (18.7%) | 15 (15.8%) | 0.68 (0.27–1.71) | 7 (19.0%) | 0.53 (0.17–1.62) | 6 (12.3%) | 0.51 (0.15–1.68) |
| AG + GG | 98 (83.1%) | 69 (72.6%) | 0.63 (0.32–1.25) | 25 (67.6%) | 0.43 (0.18–0.98) *,b | 36 (73.5%) | 0.65 (0.28–1.51) |
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| AA | 105 (89.0%) | 89 (93.7%) | 1.00 | 35 (94.6%) | 1.00 | 45 (91.8%) | 1.00 |
| AG | 13 (11.0%) | 6 (6.3%) | 0.58 (0.20–1.63) | 2 (5.4%) | 0.43 (0.09–2.10) | 4 (8.2%) | 0.80 (0.24–2.68) |
| GG | 0 (0 %) | 0 (0 %) | --- | 0 (0 %) | --- | 0 (0 %) | --- |
| AG + GG | 13 (11.0%) | 6 (6.3%) | 0.58 (0.20–1.63) | 2 (5.4%) | 0.43 (0.09–2.10) | 4 (8.2%) | 0.80 (0.24–2.68) |
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| CC | 101 (85.6%) | 77 (81.1%) | 1.00 | 30 (81.1%) | 1.00 | 39 (79.6%) | 1.00 |
| CA | 17 (14.4%) | 16 (16.8%) | 1.17 (0.54–2.52) | 6 (16.2%) | 1.02 (0.35–2.94) | 9 (18.4%) | 1.39 (0.55–3.53) |
| AA | 0 (0.0%) | 2 (2.1%) | --- | 1 (2.7%) | --- | 1 (2.0%) | --- |
| CA + AA | 17 (14.4%) | 18 (18.9%) | 1.27 (0.60–2.70) | 7 (18.9%) | 1.16 (0.42–3.21) | 10 (20.4%) | 1.49 (0.60–3.70) |
SNP: single nucleotide polymorphism; EGFR: epidermal growth factor receptor; N: number; AOR: adjusted odds ratio; CI: confidence interval; The AORs with 95% CIs were estimated by multiple logistic regression models after controlling for age, gender and cigarette smoking status. * denotes significant difference of the carbonic anhydrase 9 polymorphism distribution compared to the wild type. a p = 0.039; b p = 0.046.
Clinicopathologic characteristics of lung adenocarcinoma patients with epidermal growth factor receptor mutation, stratified by polymorphic genotypes of carbonic anhydrase 9 rs2071676.
| Variable | ALL ( | EGFR Wild Type ( | EGFR Mutation ( | ||||||
|---|---|---|---|---|---|---|---|---|---|
| AA | AG + GG | AA | AG + GG | AA | AG + GG | ||||
|
| |||||||||
| I + II | 18 (17.6%) | 102 (27.4%) | 4 (10.8%) | 43 (27.6%) | 14 (21.5%) | 59 (27.3%) | |||
| III + IV | 84 (82.4%) | 270 (72.6%) | 33 (89.2%) | 113 (72.4%) | 51 (78.5%) | 157 (72.7%) | |||
|
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| T1 + T2 | 60 (58.8%) | 198 (53.2%) | 22 (59.5%) | 78 (50.0%) | 38 (58.5%) | 120 (55.6%) | |||
| T3 + T4 | 42 (41.2%) | 174 (46.8%) | 15 (40.5%) | 78 (50.0%) | 27 (41.5%) | 96 (44.4%) | |||
|
| |||||||||
| Negative | 27 (26.5%) | 113 (30.4%) | 4 (10.8%) | 53 (34.0%) | 23 (35.4%) | 60 (27.8%) | |||
| Positive | 75 (73.5%) | 259 (69.6%) | 33 (89.2%) | 103 (66.0%) | 42 (64.6%) | 156 (72.7%) | |||
|
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| Negative | 45 (44.1%) | 164 (44.1%) | 15 (40.5%) | 75 (48.1%) | 30 (46.2%) | 89 (41.2%) | |||
| Positive | 57 (55.9%) | 208 (55.9%) | 22 (59.5%) | 81 (51.9%) | 35 (53.8%) | 127 (58.8%) | |||
|
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| Well/Moderately | 87 (85.3%) | 304 (81.7%) | 28 (75.7%) | 111 (71.2%) | 59 (90.8%) | 193 (89.4%) | |||
| Poorly | 15 (14.7%) | 68 (18.3%) | 9 (24.3%) | 45 (28.8%) | 6 (9.2%) | 23 (10.6%) | |||
EGFR: epidermal growth factor receptor; N: number; * denotes significant difference about the distribution of the clinicopathologic characteristics of lung adenocarcinoma.
Clinicopathologic characteristics of 213 male lung adenocarcinoma patients with epidermal growth factor receptor mutation, stratified by polymorphic genotypes of carbonic anhydrase 9 rs2071676.
| Variable | ALL ( | EGFR Wild Type ( | EGFR Mutation ( | ||||||
|---|---|---|---|---|---|---|---|---|---|
| AA | AG + GG | AA | AG + GG | AA | AG + GG | ||||
|
| |||||||||
| I + II | 7 (15.2%) | 42 (25.1%) | 1 (5.0%) | 26 (26.5%) | 6 (23.1%) | 16 (23.2%) | |||
| III + IV | 39 (84.8%) | 125 (74.9%) | 19 (95.0%) | 72 (73.5%) | 20 (76.9%) | 53 (76.8%) | |||
|
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| T1 + T2 | 27 (58.7%) | 86 (51.5%) | 11 (55.0%) | 50 (51.0%) | 16 (61.5%) | 36 (52.2%) | |||
| T3 + T4 | 19 (41.3%) | 81 (48.5%) | 9 (45.0%) | 48 (49.0%) | 10 (38.5%) | 33 (47.8%) | |||
|
| |||||||||
| Negative | 8 (17.4%) | 47 (28.1%) | 0 (0%) | 31 (31.6%) | 8 (30.8%) | 16 (23.2%) | |||
| Positive | 38 (82.6%) | 120 (71.9%) | 20 (100%) | 67 (68.4%) | 18 (69.2%) | 53 (76.8%) | |||
|
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| Negative | 19 (41.3%) | 77 (46.1%) | 7 (35.0%) | 50 (51.0%) | 12 (46.2%) | 27 (39.1%) | |||
| Positive | 27 (58.7%) | 90 (53.9%) | 13 (65.0%) | 48 (49.0%) | 14 (53.8%) | 42 (60.9%) | |||
|
| |||||||||
| Well/Moderately | 39 (84.8%) | 123 (73.7%) | 16 (80.0%) | 64 (65.3%) | 23 (88.5%) | 59 (85.5%) | |||
| Poorly | 7 (15.2%) | 44 (26.3%) | 4 (20.0%) | 34 (34.7%) | 3 (11.5%) | 10 (14.5%) | |||
EGFR: epidermal growth factor receptor; N: number; * denotes significant difference about the distribution of the clinicopathologic characteristics of lung adenocarcinoma.