Literature DB >> 32235944

Genomic heterogeneity in bladder cancer: challenges and possible solutions to improve outcomes.

Joshua J Meeks1, Hikmat Al-Ahmadie2, Bishoy M Faltas3, John A Taylor4, Thomas W Flaig5, David J DeGraff6, Emil Christensen7, Benjamin L Woolbright4, David J McConkey8, Lars Dyrskjøt7.   

Abstract

Histological and molecular analyses of urothelial carcinoma often reveal intratumoural and intertumoural heterogeneity at the genomic, transcriptional and cellular levels. Despite the clonal initiation of the tumour, progression and metastasis often arise from subclones that can develop naturally or during therapy, resulting in molecular alterations with a heterogeneous distribution. Variant histologies in tumour tissues that have developed distinct morphological characteristics divergent from urothelial carcinoma are extreme examples of tumour heterogeneity. Ultimately, heterogeneity contributes to drug resistance and relapse after therapy, resulting in poor survival outcomes. Mutation profile differences between patients with muscle-invasive and metastatic urothelial cancer (interpatient heterogeneity) probably contribute to variability in response to chemotherapy and immunotherapy as first-line treatments. Heterogeneity can occur on multiple levels and averaging or normalizing these alterations is crucial for clinical trial and drug design to enable appropriate therapeutic targeting. Identification of the extent of heterogeneity might shape the choice of monotherapy or additional combination treatments to target different drivers and genetic events. Identification of the lethal tumour cell clones is required to improve survival of patients with urothelial carcinoma.

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Year:  2020        PMID: 32235944      PMCID: PMC7968350          DOI: 10.1038/s41585-020-0304-1

Source DB:  PubMed          Journal:  Nat Rev Urol        ISSN: 1759-4812            Impact factor:   14.432


  122 in total

Review 1.  Clonal Heterogeneity and Tumor Evolution: Past, Present, and the Future.

Authors:  Nicholas McGranahan; Charles Swanton
Journal:  Cell       Date:  2017-02-09       Impact factor: 41.582

2.  Intratumoral Heterogeneity of Bladder Cancer by Molecular Subtypes and Histologic Variants.

Authors:  Joshua I Warrick; Gottfrid Sjödahl; Matthew Kaag; Jay D Raman; Suzanne Merrill; Lauren Shuman; Guoli Chen; Vonn Walter; David J DeGraff
Journal:  Eur Urol       Date:  2018-09-25       Impact factor: 20.096

3.  Paired Exome Analysis Reveals Clonal Evolution and Potential Therapeutic Targets in Urothelial Carcinoma.

Authors:  Philippe Lamy; Iver Nordentoft; Karin Birkenkamp-Demtröder; Mathilde Borg Houlberg Thomsen; Palle Villesen; Søren Vang; Jakob Hedegaard; Michael Borre; Jørgen Bjerggaard Jensen; Søren Høyer; Jakob Skou Pedersen; Torben F Ørntoft; Lars Dyrskjøt
Journal:  Cancer Res       Date:  2016-08-03       Impact factor: 12.701

4.  A case of heterogeneous sensitivity to panitumumab in cetuximab-refractory colorectal adenocarcinoma metastases.

Authors:  Eric Marks; Syed Mujtaba Rizvi; Nabeel Sarwani; Zhaohai Yang; Wafik S El-Deiry
Journal:  Cancer Biol Ther       Date:  2015       Impact factor: 4.742

5.  Tumor Heterogeneity and Lesion-Specific Response to Targeted Therapy in Colorectal Cancer.

Authors:  Mariangela Russo; Giulia Siravegna; Lawrence S Blaszkowsky; Giorgio Corti; Giovanni Crisafulli; Leanne G Ahronian; Benedetta Mussolin; Eunice L Kwak; Michela Buscarino; Luca Lazzari; Emanuele Valtorta; Mauro Truini; Nicholas A Jessop; Hayley E Robinson; Theodore S Hong; Mari Mino-Kenudson; Federica Di Nicolantonio; Ashraf Thabet; Andrea Sartore-Bianchi; Salvatore Siena; A John Iafrate; Alberto Bardelli; Ryan B Corcoran
Journal:  Cancer Discov       Date:  2015-12-07       Impact factor: 39.397

Review 6.  Precision medicine and bladder cancer heterogeneity.

Authors:  Guofeng Ma; Xuecheng Yang; Ye Liang; Liping Wang; Dan Li; Yuanbin Chen; Zhijuan Liang; Yonghua Wang; Haitao Niu
Journal:  Bull Cancer       Date:  2018-09-20       Impact factor: 1.276

7.  Intratumor heterogeneity and branched evolution revealed by multiregion sequencing.

Authors:  Marco Gerlinger; Andrew J Rowan; Stuart Horswell; James Larkin; David Endesfelder; Eva Gronroos; Pierre Martinez; Nicholas Matthews; Aengus Stewart; Charles Swanton; M Math; Patrick Tarpey; Ignacio Varela; Benjamin Phillimore; Sharmin Begum; Neil Q McDonald; Adam Butler; David Jones; Keiran Raine; Calli Latimer; Claudio R Santos; Mahrokh Nohadani; Aron C Eklund; Bradley Spencer-Dene; Graham Clark; Lisa Pickering; Gordon Stamp; Martin Gore; Zoltan Szallasi; Julian Downward; P Andrew Futreal
Journal:  N Engl J Med       Date:  2012-03-08       Impact factor: 91.245

Review 8.  Molecular tumor heterogeneity in muscle invasive bladder cancer: Biomarkers, subtypes, and implications for therapy.

Authors:  Jose Batista da Costa; Ewan A Gibb; Timo K Nykopp; Miles Mannas; Alexander W Wyatt; Peter C Black
Journal:  Urol Oncol       Date:  2018-12-08       Impact factor: 3.498

9.  Tracking the Evolution of Non-Small-Cell Lung Cancer.

Authors:  Mariam Jamal-Hanjani; Gareth A Wilson; Nicholas McGranahan; Nicolai J Birkbak; Thomas B K Watkins; Selvaraju Veeriah; Seema Shafi; Diana H Johnson; Richard Mitter; Rachel Rosenthal; Max Salm; Stuart Horswell; Mickael Escudero; Nik Matthews; Andrew Rowan; Tim Chambers; David A Moore; Samra Turajlic; Hang Xu; Siow-Ming Lee; Martin D Forster; Tanya Ahmad; Crispin T Hiley; Christopher Abbosh; Mary Falzon; Elaine Borg; Teresa Marafioti; David Lawrence; Martin Hayward; Shyam Kolvekar; Nikolaos Panagiotopoulos; Sam M Janes; Ricky Thakrar; Asia Ahmed; Fiona Blackhall; Yvonne Summers; Rajesh Shah; Leena Joseph; Anne M Quinn; Phil A Crosbie; Babu Naidu; Gary Middleton; Gerald Langman; Simon Trotter; Marianne Nicolson; Hardy Remmen; Keith Kerr; Mahendran Chetty; Lesley Gomersall; Dean A Fennell; Apostolos Nakas; Sridhar Rathinam; Girija Anand; Sajid Khan; Peter Russell; Veni Ezhil; Babikir Ismail; Melanie Irvin-Sellers; Vineet Prakash; Jason F Lester; Malgorzata Kornaszewska; Richard Attanoos; Haydn Adams; Helen Davies; Stefan Dentro; Philippe Taniere; Brendan O'Sullivan; Helen L Lowe; John A Hartley; Natasha Iles; Harriet Bell; Yenting Ngai; Jacqui A Shaw; Javier Herrero; Zoltan Szallasi; Roland F Schwarz; Aengus Stewart; Sergio A Quezada; John Le Quesne; Peter Van Loo; Caroline Dive; Allan Hackshaw; Charles Swanton
Journal:  N Engl J Med       Date:  2017-04-26       Impact factor: 91.245

10.  Mutational patterns in chemotherapy resistant muscle-invasive bladder cancer.

Authors:  David Liu; Philip Abbosh; Daniel Keliher; Brendan Reardon; Diana Miao; Kent Mouw; Amaro Weiner-Taylor; Stephanie Wankowicz; Garam Han; Min Yuen Teo; Catharine Cipolla; Jaegil Kim; Gopa Iyer; Hikmat Al-Ahmadie; Essel Dulaimi; David Y T Chen; R Katherine Alpaugh; Jean Hoffman-Censits; Levi A Garraway; Gad Getz; Scott L Carter; Joaquim Bellmunt; Elizabeth R Plimack; Jonathan E Rosenberg; Eliezer M Van Allen
Journal:  Nat Commun       Date:  2017-12-19       Impact factor: 14.919

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  31 in total

Review 1.  Role of Chromatin Modifying Complexes and Therapeutic Opportunities in Bladder Cancer.

Authors:  Khyati Meghani; Lauren Folgosa Cooley; Andrea Piunti; Joshua J Meeks
Journal:  Bladder Cancer       Date:  2022-06-03

2.  Pharmacological Inhibition of miR-130 Family Suppresses Bladder Tumor Growth by Targeting Various Oncogenic Pathways via PTPN1.

Authors:  Yuya Monoe; Kentaro Jingushi; Akitaka Kawase; Takayuki Hirono; Ryo Hirose; Yoshino Nakatsuji; Kaori Kitae; Yuko Ueda; Hiroaki Hase; Yuichi Abe; Jun Adachi; Takeshi Tomonaga; Kazutake Tsujikawa
Journal:  Int J Mol Sci       Date:  2021-04-29       Impact factor: 5.923

Review 3.  Developing Precision Medicine for Bladder Cancer.

Authors:  Brendan J Guercio; Gopa Iyer; Jonathan E Rosenberg
Journal:  Hematol Oncol Clin North Am       Date:  2021-04-10       Impact factor: 2.861

4.  T1 bladder carcinoma with variant histology: pathological features and clinical significance.

Authors:  Antonio Lopez-Beltran; Ana Blanca; Alessia Cimadamore; Rodolfo Montironi; Rafael J Luque; Metka Volavšek; Liang Cheng
Journal:  Virchows Arch       Date:  2022-02-04       Impact factor: 4.535

5.  tRNA-Derived Fragments (tRFs) in Bladder Cancer: Increased 5'-tRF-LysCTT Results in Disease Early Progression and Patients' Poor Treatment Outcome.

Authors:  Maria-Alexandra Papadimitriou; Margaritis Avgeris; Panagiotis Levis; Evangelia Ch Papasotiriou; Georgios Kotronopoulos; Konstantinos Stravodimos; Andreas Scorilas
Journal:  Cancers (Basel)       Date:  2020-12-06       Impact factor: 6.639

6.  Consensus statements from the EAU-ESMO collaboration for advanced and variant bladder cancer: can we move the needle to improve survival?

Authors:  Vignesh T Packiam
Journal:  Transl Androl Urol       Date:  2020-12

Review 7.  Role of Exosomal miRNA in Bladder Cancer: A Promising Liquid Biopsy Biomarker.

Authors:  Xuan-Mei Piao; Eun-Jong Cha; Seok Joong Yun; Wun-Jae Kim
Journal:  Int J Mol Sci       Date:  2021-02-08       Impact factor: 5.923

Review 8.  Molecular Pathology of Urothelial Carcinoma.

Authors:  Hikmat Al-Ahmadie; George J Netto
Journal:  Surg Pathol Clin       Date:  2021-09

9.  Identification of glycogene-type and validation of ST3GAL6 as a biomarker predicts clinical outcome and cancer cell invasion in urinary bladder cancer.

Authors:  Sumiya Dalangood; Zhen Zhu; Zhihui Ma; Jiaxuan Li; Qinghe Zeng; Yilin Yan; Bing Shen; Jun Yan; Ruimin Huang
Journal:  Theranostics       Date:  2020-08-08       Impact factor: 11.556

10.  High-throughput sequencing identified circular RNA circUBE2K mediating RhoA associated bladder cancer phenotype via regulation of miR-516b-5p/ARHGAP5 axis.

Authors:  Chen Yang; Zezhong Mou; Siqi Wu; Yuxi Ou; Zheyu Zhang; Xinan Chen; Xiyu Dai; Chenyang Xu; Shanhua Mao; Haowen Jiang
Journal:  Cell Death Dis       Date:  2021-07-20       Impact factor: 8.469

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