Catalytic, selective modifications of natural products can be a fertile platform for not only unveiling new natural product analogues with altered biological activity, but also for revealing new reactivity and selectivity hierarchies for embedded functional groups in complex environments. Motivated by these intersecting aims, we report site- and stereoselective oxidation reactions of geldanamycin facilitated by aspartyl-peptide catalysts. Through the isolation and characterization of four new geldanamycin oxides, we discovered a synergistic effect between lead peptide-based catalysts and geldanamycin, resulting in an unexpected reaction pathway. Curiously, our discoveries would likely not have been possible absent the attractive noncovalent interactions intrinsic to both the catalysts and the natural product. The result is a set of new "meta" catalytic reactions that deliver both unknown and previously incompletely characterized geldanamycin analogues. Enabled by the catalytic, site-selective epoxidation of geldanamycin, biological assays were carried out to document the bioactivities of the new compounds.
Catalytic, selective modifications of natural products can be a fertile platform for not only unveiling new natural product analogues with altered biological activity, but also for revealing new reactivity and selectivity hierarchies for embedded functional groups in complex environments. Motivated by these intersecting aims, we report site- and stereoselective oxidation reactions of geldanamycin facilitated by aspartyl-peptide catalysts. Through the isolation and characterization of four new geldanamycin oxides, we discovered a synergistic effect between lead peptide-based catalysts and geldanamycin, resulting in an unexpected reaction pathway. Curiously, our discoveries would likely not have been possible absent the attractive noncovalent interactions intrinsic to both the catalysts and the natural product. The result is a set of new "meta" catalytic reactions that deliver both unknown and previously incompletely characterized geldanamycin analogues. Enabled by the catalytic, site-selective epoxidation of geldanamycin, biological assays were carried out to document the bioactivities of the new compounds.
Catalysis in chemistry
and biochemistry is founded upon accelerating
reaction rates and achieving control over some selectivity issue.[1,2] Accordingly, the field of “asymmetric catalysis” continues
to blossom as an ever more powerful way of producing stereochemically
homogeneous building blocks with high efficiency.[3] Directing chiral catalysts toward complex substrates, such
as bioactive natural products, creates a further challenge in addition
to enantioselectivity, involving the differentiation of functional
groups within the same compound.[4,5] If more than one copy
of the same reactive functional group exists in the structure, then
the issue of stereoselectivity is compounded by that of site selectivity,
resulting in a demanding landscape of partitioned pathways that lead
to many different products to traverse. As a pragmatic solution to
these multifaceted selectivity challenges, the application of a diverse
catalyst library to a given scaffold offers the opportunity to simultaneously
assess (a) multiproduct reaction outcomes and (b) to achieve analogues
that might not be available in a straightforward manner by either
biosynthetic or chemical methods. In addition, and perhaps most alluringly,
subjecting complex molecules to catalyst libraries also creates the
opportunity to unveil unexpected reactivity, leading to compounds
that might not be targeted at all based on canonical reactivity patterns.
This paper discloses findings along all of these lines, wherein we
have observed an unanticipated cooperativity between a complex substrate
of interest and various catalysts. Accordingly, our study has provided
a number of perhaps “cryptic” natural product analogues.In terms of project design, we were curious about expanding the
breadth of aspartic acid-based peptides in the context of natural
product derivatization. In the field of asymmetric catalysis, for
small molecule functionalization, we had previously demonstrated that
Asp-containing peptides are efficient and selective catalysts for
both enantioselective alkene epoxidation (Figure a),[6,7] as well as Baeyer–Villiger
oxidation[8,9] with then-unprecedented catalyst-controlled
reversals of intrinsic migratory aptitude tendencies (Figure b). Mechanistically, the key
has been a catalytic shuttle between the aspartic acid catalyst and
its reactive aspartyl peracid form (1), which transfers
the O atom in each scenario. We had also shown that a predictive choice
of catalyst (i.e., peptide-sequence-selected) could be employed to
predetermine whether epoxidation or Baeyer–Villiger oxidation
would occur, at least with a carefully designed, admittedly “rigged”
substrate 2 (Figure c).[9] Accordingly, a critical
next step for the advancement of catalyst-dependent, site-selective
diversification of complex natural products with the Asp-based catalyst
paradigm is to demonstrate feasibility with genuinely complex bioactive
structures. For this purpose, we chose to explore the catalyst-dependent
diversification of geldanamycin using Asp-containing peptides (Figure d).
Figure 1
Overview of aspartyl-peptide
catalyzed reactions and geldanamycin.
Overview of aspartyl-peptide
catalyzed reactions and geldanamycin.Geldanamycin exhibits profound biological activity, targeting Hsp90,[10,11] a molecular chaperone responsible for folding, stabilization, and
maturation of many client proteins, and has shown promise as an anticancer
therapeutic.[12−15] However, geldanamycin exhibits poor bioavailability and hepatotoxicity,[16] stimulating the pursuit of new analogues to
address these issues via total[17,18] and semisynthetic methods.[19−22] In fact, geldanamycin derivatives, such as 17-allylamino-17-demethoxygeldanamycin
(17-AAG),[23] have reached clinical
trials for the treatment of many types of cancer, including colorectal,
breast, ovarian, lung, multiple myeloma, and leukemia.[24] In addition, geldanamycin is a challenge for
confronting chemoselectivity, as it contains two alkenyl regions for
epoxidation—a diene and an isolated trisubstituted alkene—along
with quinoid functionality replete with unsaturation (red bonds, Figure d). Therefore, multiple
alkene sites may be subject to functionalization, along with the consideration
of π-facial selectivity that could lead to various diastereomers
from the epoxidation of each alkene site. Finally, practical considerations
were also favorable, such as accessibility to the compound and solubility
in a variety of reaction-compatible solvents.
Results and Discussion
Our survey of aspartyl peptide-based catalysts produced interesting
and unexpected results immediately. As is discussed in detail below,
four principle mono-oxide products of geldanamycin are observed in
these reactions, and their ratios may be extensively modulated with
catalyst-dependent kinetic control. Two of the compounds resolve long-standing
ambiguities regarding diastereomerism of the geldanamycin-derived
epoxides,[14,21] one of which is efficiently accessed for
the first time based on a unique, peptide-based catalyst. Two other
compounds, each also unveiled for the first time as a result of a
specific aspartyl peptide-based catalyst, are the products of an unanticipated
reaction pathway. Moreover, observation of these compounds emerges
from an unanticipated cooperation between the complexity of the peptide-based
chiral catalysts and the embedded functional group arrays within the
macrocyclic molecular scaffold of geldanamycin. This symbiosis, between
complex chiral catalysts and complex substrates, enables explicit
biological testing of these new and fully characterized compounds,
several of which represent structures that were outside of our original
conception, grounded in either rational design or traditional scaffold
diversification analysis.
Chemistry
Initiating our investigations,
geldanamycin
oxidation was tested using m-CPBA to establish inherent
reactivity and selectivity, as these results are likely to be minimally
biased by outer sphere noncovalent interactions between the reactive
species and substrate, beyond the traditional Henbest paradigm.[25] Reaction of geldanamycin with m-CPBA cleanly yielded two mono-oxidized products in a 15:85 ratio
(A:B, Figure , entry 1), strongly favoring compound B. Upon isolation and characterization by NMR spectroscopy, it was
determined that A and B are diastereomeric
epoxides, derived from reaction of the 8,9-trisubstituted alkene.
These compounds have been reported previously, albeit in the absence
of either a relative or absolute stereochemical assignment.[14,21] Nor had either been produced with catalyst-dependent selectivity,
to our knowledge. In our hands, we were delighted to achieve X-ray
quality crystals of A. Analysis of the X-ray crystal
structure revealed the complete stereochemistry of the compound, displaying
that epoxidation occurs from the “bottom” face, as drawn,
to yield A, implying that the m-CPBA-favored
product B is the result of epoxidation of the “top”
alkene face.
Figure 2
Initial peptide evaluation and structure determination.
Data is
an average from two trials. Determined using UPLC from crude reaction
mixtures with an internal standard and calibration curve. Product
distributions are corrected to total 100%. See Supporting Information for yields. (abbreviations: Boc = tert-butyloxycarbonyl; Aic = 2-aminoindane carboxyl; Z =
Cbz = carboxybenzyl; Acpc = 1-aminocyclopropane carboxyl; EBA = ethylbenzylamine;
trt = trityl).
Initial peptide evaluation and structure determination.
Data is
an average from two trials. Determined using UPLC from crude reaction
mixtures with an internal standard and calibration curve. Product
distributions are corrected to total 100%. See Supporting Information for yields. (abbreviations: Boc = tert-butyloxycarbonyl; Aic = 2-aminoindane carboxyl; Z =
Cbz = carboxybenzyl; Acpc = 1-aminocyclopropane carboxyl; EBA = ethylbenzylamine;
trt = trityl).The coin of the realm in studies
of site-selective catalysis is
the catalyst-dependent reversal of the intrinsic selectivity patterns
observed with simple reagents and catalysts. Thus, we then transitioned
to the exploration of Asp-based catalysts. Rather surprisingly, results
divergent from those observed with m-CPBA surfaced
immediately. Using the monomeric Boc-Asp-OMe, the m-CPBA-favored product B is still favored over A, although to a lesser degree, and a new product (C) is now observed (Figure , entry 2). Interestingly, C results from epoxidation
of the quinone at the 16,17-position, a result also confirmed by X-ray
crystallography analysis. Further evaluation of catalysts (vide infra) led to the observation of product D, which also results from quinone epoxidation at the 16,17-position,
yet from the alternate π face in comparison to C. This structure was also established by X-ray crystallography analysis.
In general, other minor products, such as from bis-oxidation or diene
epoxidation, may be produced, yet low yields (<5%) excluded these
from our analysis. These observations alone struck us as quite noteworthy.
The most preliminary survey of Asp-based catalysts rapidly delivered
three alternative products relative to the major compound produced
by m-CPBA. Two of these geldanamycin oxides resolved
long-standing structural ambiguity (A and B), and two (C and D) proved to be new geldanamycin
scaffolds, unknown prior to the present studies, to our knowledge.
Overall, all four compounds provided new insight into reactivity trends
of both geldanamycin and Asp-containing peptide catalysts.To
assess the extent to which these catalyst-dependent product
ratios could be varied, a library of 14 Asp-containing peptides was
selected from previous projects and was then evaluated (Figure , select results shown; for
full list, see Supporting Information).
Low selectivities were measured for predictable β-turn-biased
and/or β-hairpin-biased sequences[26−28] (entries 3–4),
including two peptides with C-terminal amide caps
(entries 5–6). A legacy catalyst from our group for allylic
alkene epoxidation[7] slightly favors product C (entry 7, P2). Both reactivity and selectivity
for 8,9-epoxidation improved significantly when Boc-Asp-Aic-d-Asp(t-Bu)-Val-OMe (P8) was employed
(entry 8). The formation of products C and D is largely suppressed with this more reactive peptide, resulting
in a distribution of 68%, 25%, 5%, and 1%, respectively (A, B, C, and D, entry 8). In
contrast to the reaction using m-CPBA, which yielded A and B in a 1:5.7 dr, P8 provides
a coveted reversal of diastereoselectivity, delivering a 2.7:1 dr
(A:B). Finally, legacy catalyst P1, which was previously reported to promote Baeyer–Villiger
oxidation (Figure b),[8] provides the most striking catalyst-dependent
diversion from conventional reactivity, exhibiting 98% selectivity
for quinone epoxidation, affording products C and D in a 3.5:1 diastereomeric ratio (entry 9).Thus, our
initial examination of Asp-based peptides (Figure ), yielded two catalysts that
favor two distinct products, alternative to that favored by m-CPBA: P8, favoring 8,9-epoxide A; and P1, favoring 16,17-epoxide C. Moreover,
the screening provides catalyst-dependent access to the unique epoxyquinones C and D, which are not detected to an appreciable
extent with m-CPBA. As these catalysts provide stark
contrasts to the outcomes induced by m-CPBA, we wished
to understand further the basis of these catalyst-controlled outcomes
in hopes of some degree of further optimization.To this end,
several new catalysts were explored in the context
of attempted optimization for product A (Figure ). Relative to catalyst P8, exchanging Aic at the i+1 position for
Acpc, d-Phe, or d-Val resulted in similar product
distributions (entries 1–3, respectively). However, P10 with Acpc in the i+1 position does provide a modest
enhancement of A:B ratio (3.1:1 dr), which
could be further optimized (vide infra). On the other
hand, if the i+1 residue is converted to an l-amino acid (Phe, Val, or Pro), the selectivity for A consecutively diminishes (entries 4–6, respectively). For
example, with P15 (Pro at i+1), almost
equal amounts of A, B, and C are observed (entry 6), as is seen with other peptides containing
the sequence Asp-Pro (P2, P4, P6, Figure ).
Figure 3
Point mutations
of A-selective catalyst. Data is an average from
two trials. Determined using UPLC from crude reaction mixtures with
an internal standard and calibration curve. Product distributions
are corrected to total 100%. See Supporting Information for yields.
(abbreviations: Boc = tert-butyloxycarbonyl; Acpc
= 1-aminocyclopropane carboxyl; Dap = l-2,3-diaminopropionic
acid).
Point mutations
of A-selective catalyst. Data is an average from
two trials. Determined using UPLC from crude reaction mixtures with
an internal standard and calibration curve. Product distributions
are corrected to total 100%. See Supporting Information for yields.
(abbreviations: Boc = tert-butyloxycarbonyl; Acpc
= 1-aminocyclopropane carboxyl; Dap = l-2,3-diaminopropionic
acid).As shown in Figure , additional changes at the i+2 position generally
diminishes the selectivity for A. When d-Asp(t-Bu) is replaced with d-Asn(trt) at i+2, thus adding a hydrogen-bond donor in place of an acceptor, selectivity
for A decreases (entry 7). Intriguingly, when the possibility
for hydrogen-bonding at this position is removed through insertion
of a d-Leu residue, selectivity for A is restored
to a small degree (entry 8). Finally, low steric bulk at i+3 (Gly, entry 9) causes diminished selectivity for product A, yet a polar aromatic group (Tyr(t-Bu),
entry 10) did not significantly modulate the product distributions
in comparison to P10. However, including a hydrogen-bond
donor (Dap(Boc)) at i+3 produces a lower amount of A, and a greater amount of C now emerges, affording
almost equal yields of A, B, and C (entry 11). Overall, this series of peptide mutations revealed that
most sequences, except those with additional hydrogen-bond donors,
are likely accessing similar transition state ensembles, resulting
in comparable energetic landscapes for the production of the major
product, A.To gain additional structural information
concerning both A-selective catalyst P10 and C-selective P1, peptide truncation
studies were performed. When A-selective catalyst P10 is shortened to the
trimer Boc-Asp-Acpc-d-Asp(OMe)-OMe, ∼8–9% selectivity
is lost for the formation of product A (Figure a, entry 2). However, the product
ratios are well within the range observed for other tetrameric peptides,
reinforcing the observation that the i+3 residue
is not the most influential position in guiding selectivity profiles
(e.g., P18 and P19 in Figure ). The dimer, Boc-Asp-Acpc-OMe, reveals a
much more significant perturbation on product selectivity, providing
approximately equal amounts of A, B, and C (entry 3), suggesting that a β-turn-biased structure
of P10 may be the source of the observed preference for A in the optimal tetrameric peptides. Indeed, the dimer results
in similar product distributions in comparison to the monomer, Boc-Asp-OMe
(entry 4). All of these data, including insight from the crystal structures,
led us to consider a selectivity model, wherein the carbamate at C7
in geldanamycin could be engaged in a directing hydrogen-bond with
the peptide backbone, guiding epoxidation to the “bottom”
alkene face (Figure b).
Figure 4
Mechanistic considerations for A-selective catalyst P10. Data is an average from two trials. Determined using
UPLC from crude reaction mixtures with an internal standard and calibration
curve. Product distributions are corrected to total 100%. See Supporting Information for yields.
Mechanistic considerations for A-selective catalyst P10. Data is an average from two trials. Determined using
UPLC from crude reaction mixtures with an internal standard and calibration
curve. Product distributions are corrected to total 100%. See Supporting Information for yields.The truncation study for C-selective P1, which favors quinone epoxidation (C and D), resulted in a much less drastic attenuation in product selectivity
(Figure a). Surprisingly,
each truncate resulted in similar product ratios to P1, all favoring the formation of C and D. Even the dimer Boc-Asp-Pro-OMe (entry 3) provides C and D in 69% and 27%, respectively, in comparison to P1, yielding C and D in 76% and
22%, respectively. A particularly remarkable comparison is that between
two dimers, with only one residue changed: the dimer Boc-Asp-Acpc-OMe (Figure a, entry 3) favors 8,9-epoxidation overall (74:26 = A+B: C+D), while Boc-Asp-Pro-OMe remains selective for quinone oxidation (4:96 = A+B: C+D). Thus, it
appears that the first two residues of P1 (Asp-Pro) are
primarily responsible for directing the reaction toward the quinone
epoxidation pathway.
Figure 5
Data-guided mechanistic speculation into quinone oxidation
to form C and D. Data is an average from
two trials.
Determined using UPLC from crude reaction mixtures with an internal
standard and calibration curve. Product distributions are corrected
to total 100%. See Supporting Information for yields.
Data-guided mechanistic speculation into quinone oxidation
to form C and D. Data is an average from
two trials.
Determined using UPLC from crude reaction mixtures with an internal
standard and calibration curve. Product distributions are corrected
to total 100%. See Supporting Information for yields.Notably, any perturbation to the l-Asp-l-Prodipeptide stereochemistry supports this assertion (Figure a, entries 5–7). In
each case, any other stereochemical dyad results in diversion of the
reaction pathway toward 8,9-epoxidation (formation of A and B). Furthermore, peptides containing the Asp-Pro
sequence tend to provide a higher yield of products C and D, but the overall product distribution is dependent
on the remaining residues (e.g., P2, P4, P6, P15). The subtle yet complex influence of
the peptide sequence on the reaction outcome reinforces the synergistic
nature of attractive interactions between the substrate and catalyst.As quinone-selective catalyst P1 promotes a distinct
reaction pathway, any selectivity model for the formation of C and D will differ substantially from that shown
in Figure b. Thus,
shown in Figure b
is an alternative scenario that may account for the strict requirement
for l-Asp-l-Pro chirality, with further selectivity
tuning by distal residues. Accordingly, it is possible that the peracid
and Pro carbonyl (blue circle) are oriented in the same direction,[29] such that interactions with the Pro(C=O)
are responsible for this selectivity. The hydroxyl group at C11, which
is situated near the back of the quinone, as drawn, could be involved
in directing the peptide via hydrogen-bonding with Pro(C=O)
toward product C. Formation of the minor epoxyquinone D could then result from conformational inversion of the quinone
π-face, or even be directed by hydrogen-bonding with the amide
at C1.Regarding the plausible selectivity models presented
in Figures b and 5b, it is absolutely essential to acknowledge that
mechanistic
rationalizations for selectivity outcomes with ratios at these levels
must be realized with an abundance of mechanistic caveats. However,
at the global level of these observed reversals of product selectivity,
in situations in which multiple, non-stereoisomeric products are formed,
we contend that the state of the art is limited and that these heuristic
models may guide the field forward. Computational studies (and even
empirical studies[29,30]) of problems of this complex
nature are also a frontier-level, extensive endeavor,[31−33] and ongoing efforts along these lines will no doubt add further
insight.As we did not anticipate formation of the epoxyquinones C and D from these studies, we wondered if their
formation
was a particular function of the catalysts, the conformation of geldanamycin
and its epoxyquinone adducts, or a synergistic result of both features.
Therefore, we examined the reactions of several model quinones (3–6; Figure ) under analogous conditions. In all cases,
no detectable reactions were observed using m-CPBA,
and decomposition of the model quinones was detected under standard
reaction conditions with P1, or when nucleophilic epoxidation
conditions were tested (e.g., t-BuOOH, base). In
contrast, compounds C and D seem to be quite
stable when formed under conditions of catalytic P1.
These realizations further bolster the symbiotic relationship between
these catalysts and their substrates. These findings may well suggest
that P1, originally discovered as a nucleophilic peracid
and Baeyer–Villiger oxidation catalyst,[8] may well be functioning once again in a peptide-tuned nucleophilic
manner in the presence of the specific functionality-adorned geldanamycin
scaffold. This assertion is supported by the fact that, subsequent
to the discovery of P1, and based on its behavior, we
also found the classical, stoichiometric nucleophilic epoxidation
conditions (t-BuOOH, base; see Supporting Information for details) allow the formation of C in a comparable yield to catalytic P1 (D was observed in a much lower amount). For practical considerations, C may be efficiently accessed using simple nucleophilic epoxidation
conditions as outlined in the Supporting Information. Furthermore, since these conditions fail to deliver efficient epoxidation
of the model quinones further underscores the importance of the global
functionality of the natural product, rather than simply its local
structural environment.
Figure 6
Evaluation of model quinones.
Evaluation of model quinones.Having identified the selective peptide catalysts P10 and P1 for geldanamycin oxidation, and in pursuit of
ample quantities for characterization and biological evaluation, several
optimized experiments were carried out (Scheme ). Fortuitously, higher reactivity was observed
as a function of higher reagent loadings/lower peptide catalyst loadings.
With P10, A and B were favored
in slightly higher ratios than at the microscale, resulting in a 3.9:1
dr of A:B (74:19:6:1 of A:B:C:D). Products A and B were isolated in 39% and 10% yields, respectively. With P1, higher conversion could be achieved through use of stoichiometric
DMAP, resulting in an A:B:C:D ratio of 0:0:76:24, from which C and D were isolated in 32% and 14% yields, respectively. Taken
together, a comparison of catalysts P10 to P1 on a somewhat larger scale reveals that the C8,9 (A+B) versus C16,17 (C+D) functionalization
ratios can swing from 93:7 to 0:100 as a function of the peptide-based
catalyst, of course with attendant tuning of the diastereoselectivity
in each series.
Scheme 1
Isolation of Geldanamycin Analogues
As 17-substituted geldanamycin derivatives have demonstrated
improved
bioactivity and bioavailability,[23,34,35] we sought to test these optimal peptide sequences
and reaction conditions with 17-AAG to access additional
analogues. We predicted that P10 would likely lead to
the same mode of epoxidation, as the local environment near the 8,9-position
is unchanged. However, we were uncertain if adjusting the electronic
nature of the quinone would disrupt or enhance quinone epoxidation
with P1. With the scaled reaction conditions shown in Scheme , P10 indeed affords the expected product, in fact with elevated selectivity
compared to geldanamycin, resulting in 17-A in 93% selectivity
and 33% isolated yield. The same epoxide diastereomer as in A was confirmed by X-ray crystallography analysis (see Supporting Information). Yet, m-CPBA was less effective with 17-AAG than geldanamycin,
providing only 30% conversion and favoring the same product as P10 in a 2:1 ratio (see Supporting Information). Finally, reaction of 17-AAG with P1 resulted
in only 10% conversion of the starting material and detection of one
new mono-oxidized product by UPLC-MS (see Supporting Information). While we have not definitively assigned the structure
of this compound, the low reactivity of this modified quinone core
in 17-AAG reflects the significant influence of the substituents
on accessing quinone oxidation. No further optimization or isolation
of this product was attempted.
Biology
Intrigued
by these novel epoxy-geldanamycin
and 17-AAG analogues, their biological activity was investigated.
As previously mentioned, geldanamycin is a well characterized Hsp90
inhibitor and has shown promising anticancer activity. Therefore,
the antiproliferative activity manifested by these analogues was determined
against two breast cancer cell lines, MCF-7 and SKBr-3. Only one of
the new compounds inhibited the growth of these cancer cells at 10
μM. Compound B, which resulted from the reaction
of geldanamycin and m-CPBA, retained the majority
of the parent compound’s antiproliferative activity. In fact,
compound B manifested an EC50 value of 338
± 160 and 28.7 ± 14.3 nM against MCF-7 and SKBr-3 cell lines,
respectively. This activity was similar (albeit less active) to geldanamycin’s
EC50 values of 19.9 and 24 nM, respectively (NCI ID: 122750).In addition to the antiproliferative activity demonstrated by these
compounds, the molecules were evaluated for direct binding to Hsp90
isoforms. The affinity of these epoxide analogues was determined for
the individual isoforms of Hsp90 to establish whether any selectivity
resulted from this modification. Fluorescence polarization assays
have revealed geldanamycin to exhibit a high affinity toward three
of the four isoforms (Hsp90α, Hsp90β, Grp94), as compared
to the mitochondrial localized isoform, TRAP1.[15] Therefore, the affinity of these molecules for Hsp90α,
Hsp90β, and Grp94 was determined using a competition fluorescence
polarization assay. The results are summarized in Table .
Table 1
Epoxy Analogues
Apparent Affinity
Data
apparent KD (μM)
CMPD
Hsp90α
Hsp90β
Grp94
A
3.41 ± 0.60
1.08 ± 0.073
2.55 ± 0.46
B
0.083 ± 0.029
0.054 ± 0.0001
0.13 ± 0.07
C
0.76 ± 0.26
0.395 ± 0.053
1.10 ± 0.49
D
0.32 ± 0.09
0.24 ± 0.04
0.54 ± 0.09
17-A
>10
>10
>10
17-B
0.90 ± 0.38
0.81 ± 0.09
1.13 ± 0.02
Consistent with the antiproliferative
data, compound B displayed a high affinity for all three
Hsp90 isoforms. In fact,
compound B exhibited a 20-fold higher affinity toward
Hsp90 as compared to diastereomer A. Intriguingly, compounds C and D exhibited no antiproliferative activity,
but retained submicromolar affinity toward Hsp90.In order to
validate that compound B manifests its
antiproliferative activity via Hsp90 inhibition, the ability of compound B to induce client protein degradation was investigated. Client
protein degradation occurs as a result of Hsp90 inhibition, because
the protein substrate is unable to reach conformation maturation and
instead is degraded via the ubiquitin-proteasome pathway. Therefore,
SKBr-3 cells were treated with increasing concentrations of compound B, and select Hsp90-dependent client proteins were evaluated
via Western-blot analysis (Figure ). Consistent with Hsp90 inhibition, the EGF receptor
and HER2 levels were reduced in a dose-dependent manner. In addition,
treatment of cells with geldanamycin is known to induce the heat shock
response, which results in the increased expression of Hsp70 and/or
Hsp90.[16] As shown in Figure , compound B induced a dose-dependent
increase in the expression of Hsp70 and Hsp90, consistent with Hsp90
inhibition in the cellular environment.
Figure 7
Compound B client protein degradation assay. Effect
of compound B on the maturation of Hsp90-dependent client
proteins. SkBr-3 cells were treated with indicated concentration of
compound or vehicle for 24 h. Cell lysates were evaluated for indicated
protein levels via Western-Blot analysis. Representative actin loading
control.
Compound B client protein degradation assay. Effect
of compound B on the maturation of Hsp90-dependent client
proteins. SkBr-3 cells were treated with indicated concentration of
compound or vehicle for 24 h. Cell lysates were evaluated for indicated
protein levels via Western-Blot analysis. Representative actin loading
control.Historically, strategies to diversify
geldanamycin have focused
on the quinone moiety. However, these results suggest that it may
be advantageous to develop analogues of geldanamycin through innovative
chemical diversity methods such as that described herein, which provided
access to analogues that were otherwise unobtainable.
Conclusions
These studies provide significant evidence that peptide modified
catalytic functionalities can deliver dramatic reversals of stereo-,
site-, and functional group selectivity in complex molecular settings.
Complementary to studies of site-selective natural product diversification
in settings where explicit targeting strategies may be derived, for
example, the glycopeptide antibiotics,[36−39] this report shows the generality
of these ideas for application to both a new natural product scaffold
(geldanamycin) and to a reaction class that might have seemed recalcitrant
to the approach (functional group-selective epoxidation). Unique chemical
discoveries emerged that highlight a potentially fertile intersection
for discovery when the domains of complex catalysts and complex substrates
are compelled to interact. Certainly in this case, the new products
formed, and possibly the selective formation of previously unassigned
geldanamycin oxides, would have been elusive absent the diversification
of the geldanamycin scaffold with catalysts targeting outer sphere
interactions.Selective access to samples of A, B, C, and D also delivered new information
about
the biological potential resident in these new derivatives and present
an enigma worthy of further study—that the quinone analogues C and D maintain Hsp90 affinity, while losing
antiproliferative effects.[40] Accordingly,
to the extent that these chemical studies unveiled previously unknown
and resolved previously unassigned, geldanamycin analogues, perhaps
these studies have also added incentive to search for additional presently
cryptic catalyst-enabled structures, creating opportunities for resolving
additional cryptic biological ambiguities.
Authors: Marco A Biamonte; Ryan Van de Water; Joseph W Arndt; Robert H Scannevin; Daniel Perret; Wen-Cherng Lee Journal: J Med Chem Date: 2010-01-14 Impact factor: 7.446
Authors: Xin Cindy Yan; Anthony J Metrano; Michael J Robertson; Nadia C Abascal; Julian Tirado-Rives; Scott J Miller; William L Jorgensen Journal: ACS Catal Date: 2018-09-13 Impact factor: 13.084