| Literature DB >> 32132545 |
N Chandravadia1, D Liang2, A G P Schjetnan3, A Carlson1, M Faraut1, J M Chung4, C M Reed4, B Dichter5,6, U Maoz2,7, S K Kalia3,8, T A Valiante3,8, A N Mamelak1, U Rutishauser9,10,11,12,13.
Abstract
A challenge for data sharing in systems neuroscience is the multitude of different data formats used. Neurodata Without Borders: Neurophysiology 2.0 (NWB:N) has emerged as a standardized data format for the storage of cellular-level data together with meta-data, stimulus information, and behavior. A key next step to facilitate NWB:N adoption is to provide easy to use processing pipelines to import/export data from/to NWB:N. Here, we present a NWB-formatted dataset of 1863 single neurons recorded from the medial temporal lobes of 59 human subjects undergoing intracranial monitoring while they performed a recognition memory task. We provide code to analyze and export/import stimuli, behavior, and electrophysiological recordings to/from NWB in both MATLAB and Python. The data files are NWB:N compliant, which affords interoperability between programming languages and operating systems. This combined data and code release is a case study for how to utilize NWB:N for human single-neuron recordings and enables easy re-use of this hard-to-obtain data for both teaching and research on the mechanisms of human memory.Entities:
Mesh:
Year: 2020 PMID: 32132545 PMCID: PMC7055261 DOI: 10.1038/s41597-020-0415-9
Source DB: PubMed Journal: Sci Data ISSN: 2052-4463 Impact factor: 6.444