| Literature DB >> 31976353 |
Stephanie Bjerrum1,2, Tobias Broger3, Rita Székely3, Satoshi Mitarai4, Japheth A Opintan5, Ernest Kenu6, Margaret Lartey7, Kennedy K Addo8, Kinuyo Chikamatsu4, Aurélien Macé3, Samuel G Schumacher3, Emmanuel Moreau3, Maunank Shah9, Isik Somuncu Johansen1,2, Claudia M Denkinger3,10.
Abstract
BACKGROUND: The novel Fujifilm SILVAMP TB-LAM (FujiLAM) assay detects mycobacterial lipoarabinomannan in urine and has demonstrated superior sensitivity to the Alere Determine TB-LAM Ag (AlereLAM) assay for detection of tuberculosis among hospitalized people with human immunodeficiency virus (PWH). This is the first study to evaluate the assay among a broad population referred for antiretroviral therapy including both outpatients (mainly) and inpatients.Entities:
Keywords: HIV; LAM; diagnostic accuracy; tuberculosis; urine
Year: 2019 PMID: 31976353 PMCID: PMC6966242 DOI: 10.1093/ofid/ofz530
Source DB: PubMed Journal: Open Forum Infect Dis ISSN: 2328-8957 Impact factor: 3.835
Tuberculosis Diagnostic Classification
| Category | Description |
|---|---|
| Definite TB | Any culture or any Xpert (baseline) positive for MTB ≥1 Positive culture (solid, liquid, sputum) and confirmed MTB complex at baseline OR ≥1 Positive Xpert (sputum or urine) at baseline |
| Possible TB | Any patient not meeting definite TB or not TB classification who is started on TB treatment or has positive laboratory findings on follow up Empiric TB treatment started by the healthcare provider OR Positive sputum culture and/or sputum Xpert and/or sputum smear on follow up |
| Not TB | All microscopy, culture, and Xpert tests negative for MTB, not started on TB treatment, recovers, and has negative follow-up tests All cultures negative (sputum, blood, including follow-up where available) AND All Xpert negative (sputum, urine, including follow-up where available) AND All smear microscopy negative (sputum including follow-up where available) AND Treatment not initiated by healthcare providers AND Improvement or full recovery of symptoms at 2 months of follow up in the absence of TB treatment |
| Unclassifiable | All participants that do not fall into groups “definite TB,” “not TB” or “possible TB” ie, No symptom resolution at follow up (same or worse) in patients with a mycobacterial work-up that are negative at baseline or in follow up at 2 months OR Loss to follow up at 2 months (patients with a mycobacterial work-up that is negative at baseline) OR Passed away (patients with a mycobacterial work-up that is negative at baseline) OR Baseline smear microscopy positive but culture and Xpert negative |
Abbreviations: MTB, Mycobacterium tuberculosis complex; TB, tuberculosis.
Figure 1.Flow diagram of study population and classification. (Analysis A) Primary diagnostic accuracy analysis including all human immunodeficiency virus (HIV)+ against a Microbiological Reference Standard (MRS). (Analysis B) Primary diagnostic accuracy analysis including all HIV + against a Composite Reference Standard (CRS). (Analysis a) Secondary sensitivity analysis including all HIV+ with unclassifiable reclassified as MRS negative. (Analysis b) Secondary sensitivity analysis including all HIV + with unclassifiable reclassified as CRS negative. (Analysis c) Secondary sensitivity analysis including all HIV+ with unclassifiable reclassified as CRS positive. IPD, inpatients; OPD, outpatients; TB, tuberculosis.
Patient Characteristics
| Key Characteristics of Study Population | |||||
|---|---|---|---|---|---|
| All n = 532 (%) | Definite TB n = 66 (%) | Possible TB n = 32 (%) | Not TB n = 352 (%) | Unclassifiablea n = 82 (%) | |
| Enrollment Site | |||||
| Outpatients | 462 (86.8) | 47 (71.2) | 15 (46.9) | 335 (95.2) | 65 (79.3) |
| Inpatients | 70 (13.2) | 19 (28.8) | 17 (53.1) | 17 (4.8) | 17 (20.7) |
| Median age in years (IQR) | 38 (31–45) | 37 (29–43) | 37 (34–44) | 39 (31–45) | 38 (32–45) |
| Female | 354 (66.5) | 39 (59.4) | 19 (59.4) | 245 (69.6) | 51 (62.2) |
| Median CD4 cell count per µL (IQR)b | 152 (44–349) | 108 (43–190) | 45 (12–179) | 216 (76–410) | 56 (16–220) |
| CD4 ≤100 cells/µL | 192 (37.7) | 32 (50.0) | 19 (63.3) | 97 (28.4) | 44 (59.5) |
| CD4 >100 cells/µL | 318 (62.3) | 32 (50.0) | 11 (36.7) | 245 (71.6) | 30 (40.5) |
| Median BMI (IQR) | 21 (18–23) | 18 (16–20) | 18 (16–22) | 21 (19–25) | 20 (17–22) |
| Positive WHO symptom screenc | 457 (86.2) | 63 (95.5) | 30 (93.8) | 295 (83.8) | 69 (86.3) |
| Previous history of TBd | 35 (6.6) | 5 (7.6) | 3 (9.4) | 22 (6.3) | 5 (6.3) |
| FujiLAM positive | 97 (18.2) | 49 (74.2) | 14 (43.8) | 27 (7.8) | 7 (8.5) |
| AlereLAM positive | 57 (10.7) | 35 (53.3) | 8 (25.0) | 9 (2.6) | 5 (6.1) |
| Vital Status at 6 Months | |||||
| Alive | 372 (69.9) | 32 (48.5) | 15 (46.9) | 321 (91.2) | 4 (4.9) |
| Died | 71 (13.4) | 22 (33.3) | 13 (40.6) | 7 (2.0) | 29 (35.4) |
| LTFU | 89 (16.7) | 12 (18.2) | 4 (12.5) | 24 (6.8) | 49 (59.8) |
Abbreviations: BMI, body mass index; IQR, interquartile range; LTFU, loss to follow up; TB, tuberculosis; WHO, World Health Organization.
aUnclassifiables were excluded from primary analysis.
bCD4 count missing for 22 participants.
cWHO symptoms score missing for 2 participants.
dTB history missing for 4 participants.
Sensitivity and specificity of FujiLAM versus AlereLAM against MRS (A) and CRS (B)
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| 35 | 17 | 31 | 367 | 53.0% (40.3–65.4) | 95.6% (93.0–97.4) | 14.7% | 67.3% (52.9–79.7) | 92.2% (89.1–94.6) | 12.0 (7.1–20.1) | 0.5 (0.4–0.6) | ||
| △Sn and △Sn | 21.2% (13.1–32.5) | −6.3% (−9.6 to −3.3) | ||||||||||||
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| All | FujiLAM | 450 | 63 | 27 | 35 | 325 | 64.3% (54.0–73.7) | 92.3% (89.0–94.9) | 21.8% | 70.0% (59.4–79.2) | 90.3% (86.7–93.1) | 8.4 (5.7–12.4) | 0.4 (0.3–0.5) | |
| AlereLAM | 450 | 43 | 9 | 55 | 343 | 43.9% (33.9–54.3) | 97.4% (95.2–98.8) | 21.8% | 82.7% (69.7–91.8) | 86.2% (82.4–89.4) | 17.2 (8.7–34.0) | 0.6 (0.5–0.7) | ||
| △Sn and △Sn | 20.4% (11.8–30.0) | −5.1% (−8.4 to −2.3) |
Abbreviations: AlereLAM, Alere Determine TB LAM Ag assay; CI, confidence interval; CRS, composite reference standard; FN, false negative; FP, false positive; FujiLAM, Fujifilm SILVAMP TB LAM assay; HIV, human immunodeficiency virus; LAM, lipoarabinomannan; LR+, likelihood ratio (+); LR−, likelihood ratio (−); MRS, microbiological reference standard; NPV, negative predictive value; PPV, positive predictive value; Sn, sensitivity; Sp, specificity; TB%, tuberculosis prevalence; TN, true negatives; TP, true positives.
a(A) Diagnostic accuracy using a MRS: Definite tuberculosis were considered reference standard positive. Not tuberculosis and Possible tuberculosis were considered reference standard negative. (B) Diagnostic accuracy using a CRS: Definite tuberculosis and Possible tuberculosis were considered reference standard positive. Not tuberculosis were considered reference standard negative.
Sensitivity and specificity of FujiLAM versus AlereLAM against MRS (A) and CRS (B) by patient status
| MRS | Test | N | TP | FP | FN | TN | Sensitivity (95% CI) | Specificity (95% CI) |
| Outpatients | FujiLAM | 397 |
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| Inpatients |
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| 28 | 73.7% (48.8–90.9) | 82.4% (65.5–93.2) | |
| △Sn and △Sn | 15.8% (−3.7 to 37.6) | −5.9% (−23.7 to 11.8) | ||||||
| CRS | Test | N | TP | FP | FN | TN | Sensitivity (95% CI) | Specificity (95% CI) |
| Outpatients | FujiLAM | 397 | 39 | 26 | 23 | 309 | 62.9% (49.7–75.8) | 92.2% (88.8–94.9) |
| AlereLAM | 397 | 24 | 8 | 38 | 327 | 38.7% (26.6–51.9) | 97.6% (95.3–99.0) | |
| △Sn and △Sn | 24.2% (15.3 to 36.2) | −5.4% (−8.7 to −2.6) | ||||||
| Inpatients | FujiLAM | 53 | 24 | 1 | 12 | 16 | 66.7% (49.0–81.4) | 94.1% (71.3–99.9) |
| AlereLAM | 53 | 19 | 1 | 17 | 16 | 52.8% (35.5–69.6) | 94.1% (71.3%–99.9%) | |
| △Sn and △Sn | 13.9% (−2.9 to 31.0) | 0.0% (−22.7 to 22.7) |
Abbreviations: AlereLAM, Alere Determine TB LAM Ag assay; CI, confidence interval; CRS, composite reference standard; FN, false negatives; FP, false positives; FujiLAM, Fujifilm SILVAMP TB LAM assay; LAM, lipoarabinomannan; MRS, microbiological reference standard; Sn, sensitivity; Sp, specificity; TN, true negatives; TP, true positives.
(A) Diagnostic accuracy using a MRS: Definite tuberculosis were considered reference standard positive. Not tuberculosis and Possible tuberculosis were considered reference standard negative. (B) Diagnostic accuracy using a CRS: Definite tuberculosis and Possible tuberculosis were considered reference standard positive. Not tuberculosis were considered reference standard negative.
Sensitivity and specificity of FujiLAM versus AlereLAM against MRS (A) and CRS (B) by CD4 strata
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| 0–100 cells/µL | FujiLAM | 148 | 27 | 35 | 5 |
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| 20 | 3 | 12 | 253 | 62.5% (43.7–78.9) | 98.8% (96.6–99.8) |
| AlereLAM | 288 | 12 | 2 | 20 | 254 | 37.5% (21.1–56.3) | 99.2% (97.2–99.9) | |
| △Sn and △Sn | 25.0% (11.6 to 42.1) | −0.4% (−2.5 to 1.5) | ||||||
| 0–200 cells/µL | FujiLAM | 237 | 39 | 35 | 10 | 153 | 79.6% (65.7–89.8) | 81.4% (75.1–86.7) |
| AlereLAM | 237 | 29 | 15 | 20 | 173 | 59.2% (44.2–73.0) | 92.0% (87.2–95.5) | |
| △Sn and △Sn | 20.4% (11.5 to 33.6) | −10.6% (−17.0 to −4.8) | ||||||
| >200 cells/µL | FujiLAM | 199 | 8 | 3 | 7 | 181 | 53.3% (26.6–78.7) | 98.4% (95.3–99.7) |
| AlereLAM | 199 | 4 | 1 | 11 | 183 | 26.7% (7.8–55.1) | 99.5% (97.0–100.0) | |
| △Sn and △Sn | 26.6% (0.8 to 52.0) | −1.1% (−3.9 to 1.0) | ||||||
| 101–200 cells/µL | FujiLAM | 89 | 12 | 0 | 5 | 72 | 70.6% (44.0–89.7) | 100.0% (95.0–100.0) |
| AlereLAM | 89 | 8 | 1 | 9 | 71 | 47.1% (23.0–72.2) | 98.6% (92.5–100.0) | |
| △Sn and △Sn | 23.5% (−0.8 to 47.3) | 1.4% (−3.7 to 7.5) | ||||||
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| 0–100 cells/µL |
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| −17.5% (−27.6 to −8.1) | ||||||
| >100 cells/µL | FujiLAM | 288 | 21 | 2 | 22 | 243 | 48.8% (33.3–64.5) | 99.2% (97.1–99.9) |
| AlereLAM | 288 | 12 | 2 | 31 | 243 | 27.9% (15.3–43.7) | 99.2% (97.1–99.9) | |
| △Sn and △Sn | 20.9% (11.0 to 35.2) | 0.0% (−1.9 to 1.9) | ||||||
| 0–200 cells/µL | FujiLAM | 237 | 50 | 24 | 22 | 141 | 69.4% (57.5–79.8) | 85.5% (79.1–90.5) |
| AlereLAM | 237 | 36 | 8 | 36 | 157 | 50.0% (38.0–62.0) | 95.2% (90.7–97.9) | |
| △Sn and △Sn | 19.4% (9.0 to 31.0) | −9.7% (−16.1 to −3.9) | ||||||
| >200 cells/µL | FujiLAM | 199 | 9 | 2 | 13 | 175 | 40.9% (20.7–63.6) | 98.9% (96.0–99.9) |
| AlereLAM | 199 | 4 | 1 | 18 | 176 | 18.2% (5.2–40.3) | 99.4% (96.9–100.0) | |
| △Sn and △Sn | 22.7% (0.4 to 43.4) | −0.6% (−3.1 to 1.6) | ||||||
| 101–200 cells/µL | FujiLAM | 89 | 12 | 0 | 9 | 68 | 57.1% (34.0–78.2) | 100.0% (94.7–100.0) |
| AlereLAM | 89 | 8 | 1 | 13 | 67 | 38.1% (18.1–61.6) | 98.5% (92.1–100.0) | |
| △Sn and △Sn | 19.0% (0.6 to 40.0) | 1.5% (−4.0 to 7.9) |
Abbreviations: AlereLAM, Alere Determine TB LAM Ag assay; CI, confidence interval; CRS, composite reference standard; FN, false negatives; FP, false positives; FujiLAM, Fujifilm SILVAMP TB LAM assay; LAM, lipoarabinomannan; MRS, microbiological reference standard; Sn, sensitivity; Sp, specificity; TN, true negatives; TP, true positive.
(A) Diagnostic accuracy using a MRS: Definite tuberculosis were considered reference standard positive. Not tuberculosis and Possible tuberculosis were considered reference standard negative. (B) Diagnostic accuracy using a CRS: Definite tuberculosis and Possible tuberculosis were considered reference standard positive. Not tuberculosis were considered reference standard negative.
Cox Regression Analyses for Mortality at 2 and 6 Months According to FujiLAM and AlereLAM Status Among All Participants (n = 532) and Among Definite TB Participants (n = 66)
| Population | Unadjusted Hazard Ratio (95% CI) |
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| At 2 Months, All Participants (n = 532) | ||
| FujiLAM negative | Ref. | |
| FujiLAM positive | 3.6 (2.0–6.2) | <.001 |
| AlereLAM negative | Ref. | |
| AlereLAM positive | 6.7 (3.8–11.7) | <.001 |
| At 2 Months, Definite TB (n = 66) | ||
| FujiLAM negative | Ref. | |
| FujiLAM positive | 6.2 (0.8–46.4] | .077 |
| AlereLAM negative | Ref. | |
| AlereLAM positive | 8.7 (2.0–38.0) | .004 |
| At 6 Months, All participants (n = 532) | ||
| FujiLAM negative | Ref. | |
| FujiLAM positive | 4.8 (3.0–7.6) | <.001 |
| AlereLAM negative | Ref. | |
| AlereLAM positive | 6.2 (3.8–10.1) | <.001 |
| At 6 Months, Definite TB (n = 66) | ||
| FujiLAM negative | Ref. | |
| FujiLAM positive | 3.7 (0.9–16.0) | .075 |
| AlereLAM negative | Ref. | |
| AlereLAM positive | 5.2 (1.7–15.3) | .003 |
Abbreviations: CI, confidence interval; Ref., reference; TB, tuberculosis.
Figure 2.Kaplan-Meier curves for cumulative 6-month mortality stratified by FujiLAM and AlereLAM, respectively. Kaplan-Meier curves shown for (A) FujiLAM among all participants (n = 532; log rank <0.001); (B) FujiLAM among definite tuberculosis (TB) participants (n = 66; log rank = 0.054); (C) AlereLAM among all participants (n = 532; log rank <0.001); (D) AlereLAM among definite TB participants (n = 66; log rank = 0.001).