Literature DB >> 3194419

M13 repeat probe detects DNA minisatellite-like sequences in gymnosperms and angiosperms.

S H Rogstad1, J C Patton, B A Schaal.   

Abstract

Several kinds of minisatellite DNA, all of which are composed of low to moderately repetitive DNA, have been identified in tetrapod genomes. While the repeating oligonucleotide elements (subrepeats) of a given minisatellite are virtually identical, subrepeat nucleotide composition differs between different minisatellites. Several minisatellites have exhibited moderate to high levels of restriction length polymorphism in a number of tetrapods. Such hypervariable markers provide powerful tools for genetic analyses in several fields of biology. Minisatellite applications have been restricted to tetrapods, but here we demonstrate that one probe, the M13 repeat probe previously used to detect minisatellites in humans and bovines, also reveals minisatellite-bearing endonuclease fragments in gymnosperms and angiosperms. While the plant minisatellites appear to be somatically stable within an individual, they often vary within species in potentially useful ways. These results demonstrate that minisatellite-like families may be distributed over a wide taxonomic range in eukaryotes, opening the possibility of a commensurately wide utility of minisatellite probes in genetic analyses.

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Year:  1988        PMID: 3194419      PMCID: PMC282692          DOI: 10.1073/pnas.85.23.9176

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  12 in total

1.  Individual-specific 'fingerprints' of human DNA.

Authors:  A J Jeffreys; V Wilson; S L Thein
Journal:  Nature       Date:  1985 Jul 4-10       Impact factor: 49.962

2.  Variable number of tandem repeat (VNTR) markers for human gene mapping.

Authors:  Y Nakamura; M Leppert; P O'Connell; R Wolff; T Holm; M Culver; C Martin; E Fujimoto; M Hoff; E Kumlin
Journal:  Science       Date:  1987-03-27       Impact factor: 47.728

3.  Cloning a selected fragment from a human DNA 'fingerprint': isolation of an extremely polymorphic minisatellite.

Authors:  Z Wong; V Wilson; A J Jeffreys; S L Thein
Journal:  Nucleic Acids Res       Date:  1986-06-11       Impact factor: 16.971

4.  Hypervariable 'minisatellite' regions in human DNA.

Authors:  A J Jeffreys; V Wilson; S L Thein
Journal:  Nature       Date:  1985 Mar 7-13       Impact factor: 49.962

5.  Improved hybridization conditions for DNA 'fingerprints' probed with M13.

Authors:  D F Westneat; W A Noon; H K Reeve; C F Aquadro
Journal:  Nucleic Acids Res       Date:  1988-05-11       Impact factor: 16.971

6.  Identification of more than 500 RFLPs by screening random genomic clones.

Authors:  J W Schumm; R G Knowlton; J C Braman; D F Barker; D Botstein; G Akots; V A Brown; T C Gravius; C Helms; K Hsiao
Journal:  Am J Hum Genet       Date:  1988-01       Impact factor: 11.025

7.  Ribosomal DNA spacer-length polymorphisms in barley: mendelian inheritance, chromosomal location, and population dynamics.

Authors:  M A Saghai-Maroof; K M Soliman; R A Jorgensen; R W Allard
Journal:  Proc Natl Acad Sci U S A       Date:  1984-12       Impact factor: 11.205

8.  "A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity". Addendum.

Authors:  A P Feinberg; B Vogelstein
Journal:  Anal Biochem       Date:  1984-02       Impact factor: 3.365

9.  DNA fingerprinting in birds.

Authors:  T Burke; M W Bruford
Journal:  Nature       Date:  1987 May 14-20       Impact factor: 49.962

10.  Demographic study of a wild house sparrow population by DNA fingerprinting.

Authors:  J H Wetton; R E Carter; D T Parkin; D Walters
Journal:  Nature       Date:  1987 May 14-20       Impact factor: 49.962

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  27 in total

1.  The synthetic (TG)n polydinucleotide: a probe for gene flow and paternity studies in wild plant populations?

Authors:  M Lönn; H Tegelström; H C Prentice
Journal:  Nucleic Acids Res       Date:  1992-03-11       Impact factor: 16.971

2.  Genetic analysis of forest tree populations: isolation of DNA from spruce and fir apices.

Authors:  J Kreike
Journal:  Plant Mol Biol       Date:  1990-05       Impact factor: 4.076

3.  DNA fingerprinting in botany: past, present, future.

Authors:  Hilde Nybom; Kurt Weising; Björn Rotter
Journal:  Investig Genet       Date:  2014-01-03

4.  A hypervariable middle repetitive DNA sequence from citrus.

Authors:  S J Orford; N S Scott; J N Timmis
Journal:  Theor Appl Genet       Date:  1995-12       Impact factor: 5.699

5.  Evolution of genetic diversity during the domestication of common-bean (Phaseolus vulgaris L.).

Authors:  G Sonnante; T Stockton; R O Nodari; V L Becerra Velásquez; P Gepts
Journal:  Theor Appl Genet       Date:  1994-11       Impact factor: 5.699

6.  DNA fingerprinting to detect genetic variation in rice using hypervariable DNA sequences.

Authors:  W Ramakrishna; K V Chowdari; M D Lagu; V S Gupta; P K Ranjekar
Journal:  Theor Appl Genet       Date:  1995-06       Impact factor: 5.699

7.  Comparative analysis of genetic diversity in pea assessed by RFLP- and PCR-based methods.

Authors:  J Lu; M R Knox; M J Ambrose; J K Brown; T H Ellis
Journal:  Theor Appl Genet       Date:  1996-11       Impact factor: 5.699

8.  Population and species variation of minisatellite DNA in Plantago.

Authors:  K Wolff; S H Rogstad; B A Schaal
Journal:  Theor Appl Genet       Date:  1994-01       Impact factor: 5.699

9.  DNA fingerprinting in rice using oligonucleotide probes specific for simple repetitive DNA sequences.

Authors:  W Ramakishana; M D Lagu; V S Gupta; P K Ranjekar
Journal:  Theor Appl Genet       Date:  1994-06       Impact factor: 5.699

10.  Assessment of genetic diversity of seagrass populations using DNA fingerprinting: implications for population stability and management.

Authors:  R S Alberte; G K Suba; G Procaccini; R C Zimmerman; S R Fain
Journal:  Proc Natl Acad Sci U S A       Date:  1994-02-01       Impact factor: 11.205

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